Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:50:28 (794698): wrapper (7.7.26015): starting
23:50:28 (794698): wrapper: running run_atlas (--nthreads 9)
[2025-05-26 23:50:28] Arguments: --nthreads 9
[2025-05-26 23:50:28] Threads: 9
[2025-05-26 23:50:28] Checking for CVMFS
[2025-05-26 23:50:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 23:50:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 23:50:29] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 23:50:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 23:50:30] 2.12.6.0 2658689 11233 252316 146467 3 361 31880613 32935936 16688 16776704 0 41116733 99.507 62127967 35502 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-26 23:50:30] CVMFS is ok
[2025-05-26 23:50:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 23:50:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 23:50:30] Further information can be found at the LHC@home message board.
[2025-05-26 23:50:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 23:50:30] Checking for apptainer binary...
[2025-05-26 23:50:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 23:50:30] Running /usr/bin/apptainer --version
[2025-05-26 23:50:30] apptainer version 1.4.1-1.el9
[2025-05-26 23:50:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 23:50:51] c6-5-7-2.aglt2.org
[2025-05-26 23:50:51] apptainer works
[2025-05-26 23:50:51] Set ATHENA_PROC_NUMBER=9
[2025-05-26 23:50:51] Set ATHENA_CORE_NUMBER=9
[2025-05-26 23:50:51] Starting ATLAS job with PandaID=6665737265
[2025-05-26 23:50:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 04:42:01]  *** The last 200 lines of the pilot log: ***
[2025-05-27 04:42:01] 2025-05-27 08:41:11,655 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 04:42:01] 2025-05-27 08:41:11,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 04:42:01] 2025-05-27 08:41:11,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 04:42:01] 2025-05-27 08:41:11,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 04:42:01] 2025-05-27 08:41:11,661 | INFO     | fitting pss+swap vs Time
[2025-05-27 04:42:01] 2025-05-27 08:41:11,661 | INFO     | sum of square deviations: 7102913589.492937
[2025-05-27 04:42:01] 2025-05-27 08:41:11,663 | INFO     | sum of deviations: 32458127158.450718
[2025-05-27 04:42:01] 2025-05-27 08:41:11,664 | INFO     | mean x: 1748326571.9577465
[2025-05-27 04:42:01] 2025-05-27 08:41:11,664 | INFO     | mean y: 2187629.954225352
[2025-05-27 04:42:01] 2025-05-27 08:41:11,664 | INFO     | -- intersect: -7987126258.229209
[2025-05-27 04:42:01] 2025-05-27 08:41:11,664 | INFO     | intersect: -7987126258.229209
[2025-05-27 04:42:01] 2025-05-27 08:41:11,664 | INFO     | chi2: 1.7524054788654326
[2025-05-27 04:42:01] 2025-05-27 08:41:11,665 | INFO     | sum of square deviations: 6734369583.426516
[2025-05-27 04:42:01] 2025-05-27 08:41:11,667 | INFO     | sum of deviations: 30964853640.161266
[2025-05-27 04:42:01] 2025-05-27 08:41:11,667 | INFO     | mean x: 1748326419.4659498
[2025-05-27 04:42:01] 2025-05-27 08:41:11,667 | INFO     | mean y: 2187008.806451613
[2025-05-27 04:42:01] 2025-05-27 08:41:11,667 | INFO     | -- intersect: -8036675578.602218
[2025-05-27 04:42:01] 2025-05-27 08:41:11,668 | INFO     | intersect: -8036675578.602218
[2025-05-27 04:42:01] 2025-05-27 08:41:11,668 | INFO     | chi2: 1.7518944609915093
[2025-05-27 04:42:01] 2025-05-27 08:41:11,674 | INFO     | current chi2=1.7518944609915093 (change=0.029160937927118963 %)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,674 | INFO     | right removable region: 278
[2025-05-27 04:42:01] 2025-05-27 08:41:11,675 | INFO     | sum of square deviations: 6734290283.426514
[2025-05-27 04:42:01] 2025-05-27 08:41:11,677 | INFO     | sum of deviations: -11288819605.673828
[2025-05-27 04:42:01] 2025-05-27 08:41:11,677 | INFO     | mean x: 1748326724.4659498
[2025-05-27 04:42:01] 2025-05-27 08:41:11,677 | INFO     | mean y: 2205621.2974910396
[2025-05-27 04:42:01] 2025-05-27 08:41:11,678 | INFO     | -- intersect: 2932959148.9331384
[2025-05-27 04:42:01] 2025-05-27 08:41:11,678 | INFO     | intersect: 2932959148.9331384
[2025-05-27 04:42:01] 2025-05-27 08:41:11,678 | INFO     | chi2: 0.19982212043865216
[2025-05-27 04:42:01] 2025-05-27 08:41:11,678 | INFO     | current chi2=0.19982212043865216 (change=88.59726685127555 %)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,679 | INFO     | sum of square deviations: 6378643964.8211775
[2025-05-27 04:42:01] 2025-05-27 08:41:11,680 | INFO     | sum of deviations: -14035739081.087603
[2025-05-27 04:42:01] 2025-05-27 08:41:11,681 | INFO     | mean x: 1748326876.9744525
[2025-05-27 04:42:01] 2025-05-27 08:41:11,681 | INFO     | mean y: 2206769.416058394
[2025-05-27 04:42:01] 2025-05-27 08:41:11,681 | INFO     | -- intersect: 3849272071.8535967
[2025-05-27 04:42:01] 2025-05-27 08:41:11,681 | INFO     | intersect: 3849272071.8535967
[2025-05-27 04:42:01] 2025-05-27 08:41:11,681 | INFO     | chi2: 0.15098157689246022
[2025-05-27 04:42:01] 2025-05-27 08:41:11,681 | INFO     | current chi2=0.15098157689246022 (change=24.442010443576784 %)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,681 | INFO     | left removable region: 20
[2025-05-27 04:42:01] 2025-05-27 08:41:11,682 | INFO     | sum of square deviations: 5325183416.0
[2025-05-27 04:42:01] 2025-05-27 08:41:11,683 | INFO     | sum of deviations: -1408741495.9999998
[2025-05-27 04:42:01] 2025-05-27 08:41:11,684 | INFO     | mean x: 1748326999.0
[2025-05-27 04:42:01] 2025-05-27 08:41:11,684 | INFO     | mean y: 2199903.8178294576
[2025-05-27 04:42:01] 2025-05-27 08:41:11,684 | INFO     | -- intersect: 464708065.44627583
[2025-05-27 04:42:01] 2025-05-27 08:41:11,684 | INFO     | intersect: 464708065.44627583
[2025-05-27 04:42:01] 2025-05-27 08:41:11,684 | INFO     | chi2: 0.09780860287784975
[2025-05-27 04:42:01] 2025-05-27 08:41:11,684 | INFO     | -- intersect: 464708065.44627583
[2025-05-27 04:42:01] 2025-05-27 08:41:11,685 | INFO     | current memory leak: -0.26 B/s (using 258 data points, chi2=0.10)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | ..............................
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . Timing measurements:
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . get job = 0 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . initial setup = 4 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . payload setup = 18 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . stage-in = 0 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . payload execution = 17328 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . stage-out = 2 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,686 | INFO     | . log creation = 0 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,687 | INFO     | ..............................
[2025-05-27 04:42:01] 2025-05-27 08:41:11,708 | INFO     | sufficient remaining disk space (75064410112 B)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,708 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,709 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6665737265: 4231274 B (within 2537553920 B limit)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,709 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6665737265/HITS.44871837._038267.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,709 | INFO     | total size of present files: 0 B (workdir size: 4231274 B)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,709 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6665737265/HITS.44871837._038267.pool.root.1 since it does not exist
[2025-05-27 04:42:01] 2025-05-27 08:41:11,799 | INFO     | 
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | job summary report
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | --------------------------------------------------
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | PanDA job id: 6665737265
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | task id: 44871837
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | errors: (none)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | pilot state: finished 
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | transexitcode: 0
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | exeerrorcode: 0
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | exeerrordiag: 
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | exitcode: 0
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | exitmsg: OK
[2025-05-27 04:42:01] 2025-05-27 08:41:11,800 | INFO     | cpuconsumptiontime: 49024 s
[2025-05-27 04:42:01] 2025-05-27 08:41:11,801 | INFO     | nevents: 400
[2025-05-27 04:42:01] 2025-05-27 08:41:11,801 | INFO     | neventsw: 0
[2025-05-27 04:42:01] 2025-05-27 08:41:11,801 | INFO     | pid: 809129
[2025-05-27 04:42:01] 2025-05-27 08:41:11,801 | INFO     | pgrp: 809129
[2025-05-27 04:42:01] 2025-05-27 08:41:11,801 | INFO     | corecount: 9
[2025-05-27 04:42:01] 2025-05-27 08:41:11,808 | INFO     | event service: False
[2025-05-27 04:42:01] 2025-05-27 08:41:11,808 | INFO     | sizes: {0: 2405012, 1: 2405211, 11: 2405211, 14: 2405445, 22: 2405473, 17350: 2437293, 17353: 2446290, 17360: 2446432}
[2025-05-27 04:42:01] 2025-05-27 08:41:11,809 | INFO     | --------------------------------------------------
[2025-05-27 04:42:01] 2025-05-27 08:41:11,809 | INFO     | 
[2025-05-27 04:42:01] 2025-05-27 08:41:11,809 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-27 04:42:01] 2025-05-27 08:41:11,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | job 6665737265 has completed (purged errors)
[2025-05-27 04:42:01] 2025-05-27 08:41:11,855 | INFO     | overall cleanup function is called
[2025-05-27 04:42:01] 2025-05-27 08:41:12,095 | INFO     | number of running child processes to parent process 809129: 1
[2025-05-27 04:42:01] 2025-05-27 08:41:12,095 | INFO     | maximum number of monitored processes: 6
[2025-05-27 04:42:01] 2025-05-27 08:41:12,095 | INFO     | aborting job monitoring since job object (job id=6665737265) has expired
[2025-05-27 04:42:01] 2025-05-27 08:41:12,864 | INFO     | --- collectZombieJob: --- 10, [809129]
[2025-05-27 04:42:01] 2025-05-27 08:41:12,865 | INFO     | zombie collector waiting for pid 809129
[2025-05-27 04:42:01] 2025-05-27 08:41:12,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 04:42:01] 2025-05-27 08:41:12,865 | INFO     | collected zombie processes
[2025-05-27 04:42:01] 2025-05-27 08:41:12,865 | INFO     | will attempt to kill all subprocesses of pid=809129
[2025-05-27 04:42:01] 2025-05-27 08:41:13,350 | INFO     | process IDs to be killed: [809129] (in reverse order)
[2025-05-27 04:42:01] 2025-05-27 08:41:13,447 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 04:42:01] 2025-05-27 08:41:13,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 04:42:01] 2025-05-27 08:41:13,463 | INFO     | did not find any defunct processes belonging to 809129
[2025-05-27 04:42:01] 2025-05-27 08:41:13,475 | INFO     | did not find any defunct processes belonging to 809129
[2025-05-27 04:42:01] 2025-05-27 08:41:13,475 | INFO     | ready for new job
[2025-05-27 04:42:01] 2025-05-27 08:41:13,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 04:42:01] 2025-05-27 08:41:13,477 | INFO     | **************************************
[2025-05-27 04:42:01] 2025-05-27 08:41:13,478 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 04:42:01] 2025-05-27 08:41:13,478 | INFO     | **************************************
[2025-05-27 04:42:01] 2025-05-27 08:41:13,478 | INFO     | 
[2025-05-27 04:42:01] 2025-05-27 08:41:13,495 | INFO     | architecture information:
[2025-05-27 04:42:01] 2025-05-27 08:41:13,495 | INFO     | executing command: cat /etc/os-release
[2025-05-27 04:42:01] 2025-05-27 08:41:13,515 | INFO     | cat /etc/os-release:
[2025-05-27 04:42:01] NAME="CentOS Linux"
[2025-05-27 04:42:01] VERSION="7 (Core)"
[2025-05-27 04:42:01] ID="centos"
[2025-05-27 04:42:01] ID_LIKE="rhel fedora"
[2025-05-27 04:42:01] VERSION_ID="7"
[2025-05-27 04:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 04:42:01] ANSI_COLOR="0;31"
[2025-05-27 04:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 04:42:01] HOME_URL="https://www.centos.org/"
[2025-05-27 04:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 04:42:01] 
[2025-05-27 04:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 04:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 04:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 04:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 04:42:01] 
[2025-05-27 04:42:01] 2025-05-27 08:41:13,515 | INFO     | **************************************
[2025-05-27 04:42:01] 2025-05-27 08:41:14,019 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-27 04:42:01] 2025-05-27 08:41:14,053 | INFO     | sufficient remaining disk space (75069652992 B)
[2025-05-27 04:42:01] 2025-05-27 08:41:14,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 04:42:01] 2025-05-27 08:41:14,054 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 04:42:01] 2025-05-27 08:41:14,054 | INFO     | update_server=False
[2025-05-27 04:42:01] 2025-05-27 08:41:14,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 04:42:01] 2025-05-27 08:41:14,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 04:42:01] 2025-05-27 08:41:14,055 | INFO     | aborting loop
[2025-05-27 04:42:01] 2025-05-27 08:41:14,055 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 04:42:01] 2025-05-27 08:41:14,055 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 04:42:01] 2025-05-27 08:41:14,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 04:42:01] 2025-05-27 08:41:14,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 04:42:01] 2025-05-27 08:41:14,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 04:42:01] 2025-05-27 08:41:14,403 | INFO     | all job control threads have been joined
[2025-05-27 04:42:01] 2025-05-27 08:41:14,438 | INFO     | all data control threads have been joined
[2025-05-27 04:42:01] 2025-05-27 08:41:14,509 | INFO     | all payload control threads have been joined
[2025-05-27 04:42:01] 2025-05-27 08:41:15,062 | INFO     | [job] retrieve thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:15,065 | INFO     | [job] job monitor thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:15,312 | INFO     | [payload] failed_post thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:15,416 | INFO     | [job] control thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:15,444 | INFO     | [data] control thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:15,516 | INFO     | [payload] control thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:15,563 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:15,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 04:42:01] 2025-05-27 08:41:16,067 | INFO     | [data] copytool_out thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:16,111 | INFO     | [data] copytool_in thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:16,124 | INFO     | [payload] validate_post thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:16,345 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:16,481 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:16,490 | INFO     | [job] validate thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:16,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 04:42:01] 2025-05-27 08:41:17,836 | INFO     | [job] queue monitor thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:19,862 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:24,273 | INFO     | job.realtimelogging is not enabled
[2025-05-27 04:42:01] 2025-05-27 08:41:25,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 04:42:01] 2025-05-27 08:41:26,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126911444800)>', '<ExcThread(monitor, started 140126554400512)>']
[2025-05-27 04:42:01] 2025-05-27 08:41:27,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 04:42:01] 2025-05-27 08:41:27,138 | INFO     | [monitor] control thread has ended
[2025-05-27 04:42:01] 2025-05-27 08:41:31,983 | INFO     | all workflow threads have been joined
[2025-05-27 04:42:01] 2025-05-27 08:41:31,984 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 04:42:01] 2025-05-27 08:41:31,984 | INFO     | traces error code: 0
[2025-05-27 04:42:01] 2025-05-27 08:41:31,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 04:42:01] 2025-05-27 08:41:32,117 [wrapper] ==== pilot stdout END ====
[2025-05-27 04:42:01] 2025-05-27 08:41:32,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 04:42:01] 2025-05-27 08:41:32,122 [wrapper] pilotpid: 798351
[2025-05-27 04:42:01] 2025-05-27 08:41:32,124 [wrapper] Pilot exit status: 0
[2025-05-27 04:42:01] 2025-05-27 08:41:32,135 [wrapper] pandaids: 6665737265
[2025-05-27 04:42:01] 2025-05-27 08:41:32,192 [wrapper] cleanup supervisor_pilot 2082627 798352
[2025-05-27 04:42:01] 2025-05-27 08:41:32,194 [wrapper] Test setup, not cleaning
[2025-05-27 04:42:01] 2025-05-27 08:41:32,205 [wrapper] apfmon messages muted
[2025-05-27 04:42:01] 2025-05-27 08:41:32,226 [wrapper] ==== wrapper stdout END ====
[2025-05-27 04:42:01] 2025-05-27 08:41:32,270 [wrapper] ==== wrapper stderr END ====
[2025-05-27 04:42:01]  *** Error codes and diagnostics ***
[2025-05-27 04:42:01]     "exeErrorCode": 0,
[2025-05-27 04:42:01]     "exeErrorDiag": "",
[2025-05-27 04:42:01]     "pilotErrorCode": 0,
[2025-05-27 04:42:01]     "pilotErrorDiag": "",
[2025-05-27 04:42:01]  *** Listing of results directory ***
[2025-05-27 04:42:01] total 412260
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas      5111 May 25 13:45 queuedata.json
[2025-05-27 04:42:01] -rwx------. 1 boincer umatlas     37140 May 25 13:46 runpilot2-wrapper.sh
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas    495897 May 25 13:46 pilot3.tar.gz
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas       100 May 26 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 04:42:01] -rwxr-xr-x. 1 boincer umatlas      7986 May 26 23:50 run_atlas
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas       105 May 26 23:50 job.xml
[2025-05-27 04:42:01] -rw-r--r--. 2 boincer umatlas 224355824 May 26 23:50 EVNT.44871834._001526.pool.root.1
[2025-05-27 04:42:01] -rw-r--r--. 2 boincer umatlas     15093 May 26 23:50 start_atlas.sh
[2025-05-27 04:42:01] drwxrwx--x. 2 boincer umatlas      4096 May 26 23:50 shared
[2025-05-27 04:42:01] -rw-r--r--. 2 boincer umatlas    508873 May 26 23:50 input.tar.gz
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas         0 May 26 23:50 boinc_lockfile
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas      2558 May 26 23:50 pandaJob.out
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas    990394 May 26 23:51 agis_schedconf.cvmfs.json
[2025-05-27 04:42:01] drwx------. 4 boincer umatlas      4096 May 26 23:51 pilot3
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas      6839 May 27 04:36 init_data.xml
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas 190314515 May 27 04:40 HITS.44871837._038267.pool.root.1
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas       531 May 27 04:40 boinc_task_state.xml
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas        95 May 27 04:40 pilot_heartbeat.json
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas      1044 May 27 04:40 memory_monitor_summary.json
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas   1603667 May 27 04:41 agis_ddmendpoints.agis.ALL.json
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas    441344 May 27 04:41 log.44871837._038267.job.log.tgz.1
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas      7719 May 27 04:41 heartbeat.json
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas      4548 May 27 04:41 pilotlog.txt
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas   1380919 May 27 04:41 log.44871837._038267.job.log.1
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas       357 May 27 04:41 output.list
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas       620 May 27 04:41 runtime_log
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas   1843200 May 27 04:41 result.tar.gz
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas      8660 May 27 04:41 runtime_log.err
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas       655 May 27 04:41 9L0MDmtbUd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmauOKDmh7fh5n.diag
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas      8192 May 27 04:42 boinc_mmap_file
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas        28 May 27 04:42 wrapper_checkpoint.txt
[2025-05-27 04:42:01] -rw-r--r--. 1 boincer umatlas     21316 May 27 04:42 stderr.txt
[2025-05-27 04:42:01] HITS file was successfully produced:
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas 190314515 May 27 04:40 shared/HITS.pool.root.1
[2025-05-27 04:42:01]  *** Contents of shared directory: ***
[2025-05-27 04:42:01] total 407276
[2025-05-27 04:42:01] -rw-r--r--. 2 boincer umatlas 224355824 May 26 23:50 ATLAS.root_0
[2025-05-27 04:42:01] -rw-r--r--. 2 boincer umatlas     15093 May 26 23:50 start_atlas.sh
[2025-05-27 04:42:01] -rw-r--r--. 2 boincer umatlas    508873 May 26 23:50 input.tar.gz
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas 190314515 May 27 04:40 HITS.pool.root.1
[2025-05-27 04:42:01] -rw-------. 1 boincer umatlas   1843200 May 27 04:41 result.tar.gz
04:42:03 (794698): run_atlas exited; CPU time 49533.101632
04:42:03 (794698): called boinc_finish(0)

</stderr_txt>
]]>

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