Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:10:24 (5770): wrapper (7.7.26015): starting
23:10:24 (5770): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 23:10:24] Arguments: --nthreads 8
[2025-05-27 23:10:24] Threads: 8
[2025-05-27 23:10:24] Checking for CVMFS
[2025-05-27 23:10:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 23:10:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 23:10:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 23:10:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 23:10:26] 2.11.2.0 1855 22217 97060 146492 1 16 20031138 25165824 4630 130560 0 12497714 99.795 13876858 1773 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 23:10:26] CVMFS is ok
[2025-05-27 23:10:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 23:10:26] Checking for apptainer binary...
[2025-05-27 23:10:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 23:10:26] Running /usr/bin/apptainer --version
[2025-05-27 23:10:26] apptainer version 1.3.2-1.el7
[2025-05-27 23:10:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 23:10:40] cg-vwn348.simple-grid.lan
[2025-05-27 23:10:40] apptainer works
[2025-05-27 23:10:40] Set ATHENA_PROC_NUMBER=8
[2025-05-27 23:10:40] Set ATHENA_CORE_NUMBER=8
[2025-05-27 23:10:40] Starting ATLAS job with PandaID=6666345463
[2025-05-27 23:10:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 04:49:02]  *** The last 200 lines of the pilot log: ***
[2025-05-28 04:49:02] 2025-05-28 02:32:25,438 | INFO     | extracted standard info from prmon json
[2025-05-28 04:49:02] 2025-05-28 02:32:25,438 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 04:49:02] 2025-05-28 02:32:25,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 04:49:02] 2025-05-28 02:32:25,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 04:49:02] 2025-05-28 02:32:25,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 04:49:02] 2025-05-28 02:32:25,445 | INFO     | fitting pss+swap vs Time
[2025-05-28 04:49:02] 2025-05-28 02:32:25,446 | INFO     | sum of square deviations: 8711530780.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,449 | INFO     | sum of deviations: 88091699969.00003
[2025-05-28 04:49:02] 2025-05-28 02:32:25,449 | INFO     | mean x: 1748390162.5
[2025-05-28 04:49:02] 2025-05-28 02:32:25,449 | INFO     | mean y: 2464514.486842105
[2025-05-28 04:49:02] 2025-05-28 02:32:25,449 | INFO     | -- intersect: -17677397442.414974
[2025-05-28 04:49:02] 2025-05-28 02:32:25,449 | INFO     | intersect: -17677397442.414974
[2025-05-28 04:49:02] 2025-05-28 02:32:25,450 | INFO     | chi2: 7.393752792418666
[2025-05-28 04:49:02] 2025-05-28 02:32:25,451 | INFO     | sum of square deviations: 8288713550.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,454 | INFO     | sum of deviations: 106806794477.00003
[2025-05-28 04:49:02] 2025-05-28 02:32:25,454 | INFO     | mean x: 1748390010.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,454 | INFO     | mean y: 2471167.43812709
[2025-05-28 04:49:02] 2025-05-28 02:32:25,454 | INFO     | -- intersect: -22526951684.158672
[2025-05-28 04:49:02] 2025-05-28 02:32:25,454 | INFO     | intersect: -22526951684.158672
[2025-05-28 04:49:02] 2025-05-28 02:32:25,455 | INFO     | chi2: 6.674747252595735
[2025-05-28 04:49:02] 2025-05-28 02:32:25,455 | INFO     | current chi2=6.674747252595735 (change=9.724500669811105 %)
[2025-05-28 04:49:02] 2025-05-28 02:32:25,455 | INFO     | right removable region: 298
[2025-05-28 04:49:02] 2025-05-28 02:32:25,456 | INFO     | sum of square deviations: 8288713550.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,459 | INFO     | sum of deviations: -18709383017.000008
[2025-05-28 04:49:02] 2025-05-28 02:32:25,459 | INFO     | mean x: 1748390315.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,459 | INFO     | mean y: 2503012.0535117057
[2025-05-28 04:49:02] 2025-05-28 02:32:25,459 | INFO     | -- intersect: 3948990469.874791
[2025-05-28 04:49:02] 2025-05-28 02:32:25,459 | INFO     | intersect: 3948990469.874791
[2025-05-28 04:49:02] 2025-05-28 02:32:25,460 | INFO     | chi2: 2.5653606679695486
[2025-05-28 04:49:02] 2025-05-28 02:32:25,460 | INFO     | current chi2=2.5653606679695486 (change=65.30367270866842 %)
[2025-05-28 04:49:02] 2025-05-28 02:32:25,460 | INFO     | sum of square deviations: 7879803557.5
[2025-05-28 04:49:02] 2025-05-28 02:32:25,464 | INFO     | sum of deviations: -74916261718.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,464 | INFO     | mean x: 1748390467.5
[2025-05-28 04:49:02] 2025-05-28 02:32:25,464 | INFO     | mean y: 2523887.3605442178
[2025-05-28 04:49:02] 2025-05-28 02:32:25,464 | INFO     | -- intersect: 16625130896.87372
[2025-05-28 04:49:02] 2025-05-28 02:32:25,464 | INFO     | intersect: 16625130896.87372
[2025-05-28 04:49:02] 2025-05-28 02:32:25,465 | INFO     | chi2: 1.0233792703853168
[2025-05-28 04:49:02] 2025-05-28 02:32:25,465 | INFO     | current chi2=1.0233792703853168 (change=60.107781990931166 %)
[2025-05-28 04:49:02] 2025-05-28 02:32:25,465 | INFO     | sum of square deviations: 7484568240.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,468 | INFO     | sum of deviations: -76764782599.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,469 | INFO     | mean x: 1748390620.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,469 | INFO     | mean y: 2524572.667820069
[2025-05-28 04:49:02] 2025-05-28 02:32:25,469 | INFO     | -- intersect: 17934731419.97032
[2025-05-28 04:49:02] 2025-05-28 02:32:25,469 | INFO     | intersect: 17934731419.97032
[2025-05-28 04:49:02] 2025-05-28 02:32:25,470 | INFO     | chi2: 0.9905765872398296
[2025-05-28 04:49:02] 2025-05-28 02:32:25,470 | INFO     | current chi2=0.9905765872398296 (change=3.2053300369409095 %)
[2025-05-28 04:49:02] 2025-05-28 02:32:25,470 | INFO     | left removable region: 30
[2025-05-28 04:49:02] 2025-05-28 02:32:25,470 | INFO     | sum of square deviations: 5968658887.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,473 | INFO     | sum of deviations: -28978613335.0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,473 | INFO     | mean x: 1748390894.5
[2025-05-28 04:49:02] 2025-05-28 02:32:25,473 | INFO     | mean y: 2520947.0223880596
[2025-05-28 04:49:02] 2025-05-28 02:32:25,473 | INFO     | -- intersect: 8491185595.0395355
[2025-05-28 04:49:02] 2025-05-28 02:32:25,473 | INFO     | intersect: 8491185595.0395355
[2025-05-28 04:49:02] 2025-05-28 02:32:25,474 | INFO     | chi2: 0.1448514290193603
[2025-05-28 04:49:02] 2025-05-28 02:32:25,474 | INFO     | -- intersect: 8491185595.0395355
[2025-05-28 04:49:02] 2025-05-28 02:32:25,474 | INFO     | current memory leak: -4.86 B/s (using 268 data points, chi2=0.14)
[2025-05-28 04:49:02] 2025-05-28 02:32:25,475 | INFO     | ..............................
[2025-05-28 04:49:02] 2025-05-28 02:32:25,475 | INFO     | . Timing measurements:
[2025-05-28 04:49:02] 2025-05-28 02:32:25,475 | INFO     | . get job = 0 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,475 | INFO     | . initial setup = 10 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,475 | INFO     | . payload setup = 147 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,476 | INFO     | . stage-in = 0 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,476 | INFO     | . payload execution = 18672 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,476 | INFO     | . stage-out = 6 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,476 | INFO     | . log creation = 1 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,476 | INFO     | ..............................
[2025-05-28 04:49:02] 2025-05-28 02:32:25,619 | INFO     | 
[2025-05-28 04:49:02] 2025-05-28 02:32:25,619 | INFO     | job summary report
[2025-05-28 04:49:02] 2025-05-28 02:32:25,619 | INFO     | --------------------------------------------------
[2025-05-28 04:49:02] 2025-05-28 02:32:25,619 | INFO     | PanDA job id: 6666345463
[2025-05-28 04:49:02] 2025-05-28 02:32:25,619 | INFO     | task id: 44871837
[2025-05-28 04:49:02] 2025-05-28 02:32:25,619 | INFO     | errors: (none)
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | pilot state: finished 
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | transexitcode: 0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | exeerrorcode: 0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | exeerrordiag: 
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | exitcode: 0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | exitmsg: OK
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | cpuconsumptiontime: 70003 s
[2025-05-28 04:49:02] 2025-05-28 02:32:25,620 | INFO     | nevents: 400
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | neventsw: 0
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | pid: 23990
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | pgrp: 23990
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | corecount: 8
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | event service: False
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | sizes: {0: 2405008, 1: 2405263, 2: 2405291, 12: 2405291, 23: 2405319, 34: 2405347, 45: 2405503, 55: 2405531, 66: 2405559, 77: 2405587, 88: 2405643, 89: 2406157, 98
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | --------------------------------------------------
[2025-05-28 04:49:02] 2025-05-28 02:32:25,621 | INFO     | 
[2025-05-28 04:49:02] 2025-05-28 02:32:25,622 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-05-28 04:49:02] 2025-05-28 02:32:26,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 04:49:02] 2025-05-28 02:32:26,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 04:49:02] 2025-05-28 02:32:26,177 | INFO     | job 6666345463 has completed (purged errors)
[2025-05-28 04:49:02] 2025-05-28 02:32:26,177 | INFO     | overall cleanup function is called
[2025-05-28 04:49:02] 2025-05-28 02:32:27,187 | INFO     | --- collectZombieJob: --- 10, [23990]
[2025-05-28 04:49:02] 2025-05-28 02:32:27,187 | INFO     | zombie collector waiting for pid 23990
[2025-05-28 04:49:02] 2025-05-28 02:32:27,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 04:49:02] 2025-05-28 02:32:27,187 | INFO     | collected zombie processes
[2025-05-28 04:49:02] 2025-05-28 02:32:27,187 | INFO     | will attempt to kill all subprocesses of pid=23990
[2025-05-28 04:49:02] 2025-05-28 02:32:27,325 | INFO     | process IDs to be killed: [23990] (in reverse order)
[2025-05-28 04:49:02] 2025-05-28 02:32:27,387 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 04:49:02] 2025-05-28 02:32:27,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 04:49:02] 2025-05-28 02:32:27,391 | INFO     | did not find any defunct processes belonging to 23990
[2025-05-28 04:49:02] 2025-05-28 02:32:27,393 | INFO     | did not find any defunct processes belonging to 23990
[2025-05-28 04:49:02] 2025-05-28 02:32:27,394 | INFO     | ready for new job
[2025-05-28 04:49:02] 2025-05-28 02:32:27,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 04:49:02] 2025-05-28 02:32:27,396 | INFO     | **************************************
[2025-05-28 04:49:02] 2025-05-28 02:32:27,396 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 04:49:02] 2025-05-28 02:32:27,396 | INFO     | **************************************
[2025-05-28 04:49:02] 2025-05-28 02:32:27,396 | INFO     | 
[2025-05-28 04:49:02] 2025-05-28 02:32:27,397 | INFO     | pilot is running in a VM
[2025-05-28 04:49:02] 2025-05-28 02:32:27,397 | INFO     | architecture information:
[2025-05-28 04:49:02] 2025-05-28 02:32:27,400 | INFO     | executing command: cat /etc/os-release
[2025-05-28 04:49:02] 2025-05-28 02:32:27,519 | INFO     | cat /etc/os-release:
[2025-05-28 04:49:02] NAME="CentOS Linux"
[2025-05-28 04:49:02] VERSION="7 (Core)"
[2025-05-28 04:49:02] ID="centos"
[2025-05-28 04:49:02] ID_LIKE="rhel fedora"
[2025-05-28 04:49:02] VERSION_ID="7"
[2025-05-28 04:49:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 04:49:02] ANSI_COLOR="0;31"
[2025-05-28 04:49:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 04:49:02] HOME_URL="https://www.centos.org/"
[2025-05-28 04:49:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 04:49:02] 
[2025-05-28 04:49:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 04:49:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 04:49:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 04:49:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 04:49:02] 
[2025-05-28 04:49:02] 2025-05-28 02:32:27,519 | INFO     | **************************************
[2025-05-28 04:49:02] 2025-05-28 02:32:28,023 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-05-28 04:49:02] 2025-05-28 02:32:28,194 | INFO     | sufficient remaining disk space (494718156800 B)
[2025-05-28 04:49:02] 2025-05-28 02:32:28,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 04:49:02] 2025-05-28 02:32:28,195 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 04:49:02] 2025-05-28 02:32:28,195 | INFO     | update_server=False
[2025-05-28 04:49:02] 2025-05-28 02:32:28,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 04:49:02] 2025-05-28 02:32:28,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 04:49:02] 2025-05-28 02:32:28,199 | INFO     | aborting loop
[2025-05-28 04:49:02] 2025-05-28 02:32:28,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 04:49:02] 2025-05-28 02:32:28,204 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 04:49:02] 2025-05-28 02:32:28,204 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 04:49:02] 2025-05-28 02:32:28,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 04:49:02] 2025-05-28 02:32:28,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 04:49:02] 2025-05-28 02:32:28,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 04:49:02] 2025-05-28 02:32:28,695 | INFO     | all payload control threads have been joined
[2025-05-28 04:49:02] 2025-05-28 02:32:29,196 | INFO     | all data control threads have been joined
[2025-05-28 04:49:02] 2025-05-28 02:32:29,201 | INFO     | [job] retrieve thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,205 | INFO     | [job] job monitor thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,623 | INFO     | [job] validate thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,643 | INFO     | [data] copytool_in thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,689 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,701 | INFO     | [payload] control thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,869 | INFO     | [payload] validate_post thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,881 | INFO     | all job control threads have been joined
[2025-05-28 04:49:02] 2025-05-28 02:32:29,887 | INFO     | [payload] failed_post thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:29,971 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:30,202 | INFO     | [data] control thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:30,208 | INFO     | [data] copytool_out thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:30,447 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:30,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 04:49:02] 2025-05-28 02:32:30,887 | INFO     | [job] control thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:31,640 | INFO     | [job] queue monitor thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:32,284 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 04:49:02] 2025-05-28 02:32:34,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988745885504)>', '<ExcThread(monitor, started 139988435965696)>']
[2025-05-28 04:49:02] 2025-05-28 02:32:34,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 04:49:02] 2025-05-28 02:32:34,239 | INFO     | [monitor] control thread has ended
[2025-05-28 04:49:02] 2025-05-28 02:32:39,035 | INFO     | all workflow threads have been joined
[2025-05-28 04:49:02] 2025-05-28 02:32:39,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 04:49:02] 2025-05-28 02:32:39,035 | INFO     | traces error code: 0
[2025-05-28 04:49:02] 2025-05-28 02:32:39,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 04:49:02] 2025-05-28 02:32:39,346 [wrapper] ==== pilot stdout END ====
[2025-05-28 04:49:02] 2025-05-28 02:32:39,414 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 04:49:02] 2025-05-28 02:32:39,478 [wrapper] pilotpid: 15387
[2025-05-28 04:49:02] 2025-05-28 02:32:39,543 [wrapper] Pilot exit status: 0
[2025-05-28 04:49:02] 2025-05-28 02:32:39,889 [wrapper] pandaids: 6666345463
[2025-05-28 04:49:02] 2025-05-28 02:32:40,379 [wrapper] cleanup supervisor_pilot  9110 15388
[2025-05-28 04:49:02] 2025-05-28 02:32:40,427 [wrapper] Test setup, not cleaning
[2025-05-28 04:49:02] 2025-05-28 02:32:40,532 [wrapper] apfmon messages muted
[2025-05-28 04:49:02] 2025-05-28 02:32:40,590 [wrapper] ==== wrapper stdout END ====
[2025-05-28 04:49:02] 2025-05-28 02:32:40,673 [wrapper] ==== wrapper stderr END ====
[2025-05-28 04:49:02]  *** Error codes and diagnostics ***
[2025-05-28 04:49:02]     "exeErrorCode": 0,
[2025-05-28 04:49:02]     "exeErrorDiag": "",
[2025-05-28 04:49:02]     "pilotErrorCode": 0,
[2025-05-28 04:49:02]     "pilotErrorDiag": "",
[2025-05-28 04:49:02]  *** Listing of results directory ***
[2025-05-28 04:49:02] total 415360
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc    495897 May 26 23:09 pilot3.tar.gz
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc      5111 May 26 23:51 queuedata.json
[2025-05-28 04:49:02] -rwx------. 1 boinc boinc     37140 May 26 23:52 runpilot2-wrapper.sh
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc       100 May 27 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 04:49:02] -rwxr-xr-x. 1 boinc boinc      7986 May 27 23:10 run_atlas
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc       105 May 27 23:10 job.xml
[2025-05-28 04:49:02] -rw-r--r--. 2 boinc boinc 224236178 May 27 23:10 EVNT.44871834._002279.pool.root.1
[2025-05-28 04:49:02] -rw-r--r--. 2 boinc boinc     15093 May 27 23:10 start_atlas.sh
[2025-05-28 04:49:02] drwxrwx--x. 2 boinc boinc        68 May 27 23:10 shared
[2025-05-28 04:49:02] -rw-r--r--. 2 boinc boinc    508879 May 27 23:10 input.tar.gz
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc      6372 May 27 23:10 init_data.xml
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc         0 May 27 23:10 boinc_lockfile
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc      2559 May 27 23:10 pandaJob.out
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc    991111 May 27 23:13 agis_schedconf.cvmfs.json
[2025-05-28 04:49:02] drwx------. 4 boinc boinc      4096 May 27 23:13 pilot3
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc 193139343 May 28 04:29 HITS.44871837._057548.pool.root.1
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc       531 May 28 04:29 boinc_task_state.xml
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc      1017 May 28 04:30 memory_monitor_summary.json
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc   1603667 May 28 04:30 agis_ddmendpoints.agis.ALL.json
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc    441374 May 28 04:30 log.44871837._057548.job.log.tgz.1
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc        95 May 28 04:32 pilot_heartbeat.json
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc      7693 May 28 04:32 heartbeat.json
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc      4540 May 28 04:32 pilotlog.txt
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc   1622473 May 28 04:32 log.44871837._057548.job.log.1
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc       357 May 28 04:32 output.list
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc       620 May 28 04:32 runtime_log
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc   2078720 May 28 04:32 result.tar.gz
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc      8673 May 28 04:32 runtime_log.err
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc       657 May 28 04:32 qzQODmVvud7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlmXKDmFoILQm.diag
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc        28 May 28 04:49 wrapper_checkpoint.txt
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc      8192 May 28 04:49 boinc_mmap_file
[2025-05-28 04:49:02] -rw-r--r--. 1 boinc boinc     20510 May 28 04:49 stderr.txt
[2025-05-28 04:49:02] HITS file was successfully produced:
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc 193139343 May 28 04:29 shared/HITS.pool.root.1
[2025-05-28 04:49:02]  *** Contents of shared directory: ***
[2025-05-28 04:49:02] total 410148
[2025-05-28 04:49:02] -rw-r--r--. 2 boinc boinc 224236178 May 27 23:10 ATLAS.root_0
[2025-05-28 04:49:02] -rw-r--r--. 2 boinc boinc     15093 May 27 23:10 start_atlas.sh
[2025-05-28 04:49:02] -rw-r--r--. 2 boinc boinc    508879 May 27 23:10 input.tar.gz
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc 193139343 May 28 04:29 HITS.pool.root.1
[2025-05-28 04:49:02] -rw-------. 1 boinc boinc   2078720 May 28 04:32 result.tar.gz
04:49:04 (5770): run_atlas exited; CPU time 70271.186076
04:49:04 (5770): called boinc_finish(0)

</stderr_txt>
]]>

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