Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:50:17 (29677): wrapper (7.7.26015): starting
17:50:17 (29677): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 17:50:17] Arguments: --nthreads 8
[2025-05-27 17:50:17] Threads: 8
[2025-05-27 17:50:17] Checking for CVMFS
[2025-05-27 17:50:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 17:50:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 17:50:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 17:50:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 17:50:19] 2.11.2.0 1304 21886 90904 146485 2 16 24174674 25165824 4285 130560 0 12846754 99.797 14219581 1793 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 17:50:19] CVMFS is ok
[2025-05-27 17:50:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 17:50:19] Checking for apptainer binary...
[2025-05-27 17:50:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 17:50:19] Running /usr/bin/apptainer --version
[2025-05-27 17:50:19] apptainer version 1.3.2-1.el7
[2025-05-27 17:50:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 17:50:21] cg-vwn245.simple-grid.lan
[2025-05-27 17:50:21] apptainer works
[2025-05-27 17:50:21] Set ATHENA_PROC_NUMBER=8
[2025-05-27 17:50:21] Set ATHENA_CORE_NUMBER=8
[2025-05-27 17:50:21] Starting ATLAS job with PandaID=6666242663
[2025-05-27 17:50:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 03:09:32]  *** The last 200 lines of the pilot log: ***
[2025-05-28 03:09:32] 2025-05-27 21:01:34,761 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 03:09:32] 2025-05-27 21:01:34,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 03:09:32] 2025-05-27 21:01:34,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 03:09:32] 2025-05-27 21:01:34,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 03:09:32] 2025-05-27 21:01:34,768 | INFO     | fitting pss+swap vs Time
[2025-05-28 03:09:32] 2025-05-27 21:01:34,769 | INFO     | sum of square deviations: 8372155816.996668
[2025-05-28 03:09:32] 2025-05-27 21:01:34,779 | INFO     | sum of deviations: 32258750183.75332
[2025-05-28 03:09:32] 2025-05-27 21:01:34,780 | INFO     | mean x: 1748370422.5033333
[2025-05-28 03:09:32] 2025-05-27 21:01:34,780 | INFO     | mean y: 2479268.2466666666
[2025-05-28 03:09:32] 2025-05-27 21:01:34,780 | INFO     | -- intersect: -6734166097.77695
[2025-05-28 03:09:32] 2025-05-27 21:01:34,780 | INFO     | intersect: -6734166097.77695
[2025-05-28 03:09:32] 2025-05-27 21:01:34,781 | INFO     | chi2: 2.3015098173825095
[2025-05-28 03:09:32] 2025-05-27 21:01:34,781 | INFO     | sum of square deviations: 7960483286.996597
[2025-05-28 03:09:32] 2025-05-27 21:01:34,784 | INFO     | sum of deviations: 51443497729.90508
[2025-05-28 03:09:32] 2025-05-27 21:01:34,792 | INFO     | mean x: 1748370270.0033898
[2025-05-28 03:09:32] 2025-05-27 21:01:34,792 | INFO     | mean y: 2486275.094915254
[2025-05-28 03:09:32] 2025-05-27 21:01:34,792 | INFO     | -- intersect: -11296109397.214718
[2025-05-28 03:09:32] 2025-05-27 21:01:34,792 | INFO     | intersect: -11296109397.214718
[2025-05-28 03:09:32] 2025-05-27 21:01:34,793 | INFO     | chi2: 1.522636916998486
[2025-05-28 03:09:32] 2025-05-27 21:01:34,793 | INFO     | current chi2=1.522636916998486 (change=33.84182394102625 %)
[2025-05-28 03:09:32] 2025-05-27 21:01:34,793 | INFO     | sum of square deviations: 7562531944.496516
[2025-05-28 03:09:32] 2025-05-27 21:01:34,796 | INFO     | sum of deviations: 50332534161.179276
[2025-05-28 03:09:32] 2025-05-27 21:01:34,796 | INFO     | mean x: 1748370117.5034482
[2025-05-28 03:09:32] 2025-05-27 21:01:34,797 | INFO     | mean y: 2485849.3206896554
[2025-05-28 03:09:32] 2025-05-27 21:01:34,797 | INFO     | -- intersect: -11633815234.956717
[2025-05-28 03:09:32] 2025-05-27 21:01:34,797 | INFO     | intersect: -11633815234.956717
[2025-05-28 03:09:32] 2025-05-27 21:01:34,797 | INFO     | chi2: 1.5230797823386362
[2025-05-28 03:09:32] 2025-05-27 21:01:34,797 | INFO     | current chi2=1.5230797823386362 (change=-0.029085419853293642 %)
[2025-05-28 03:09:32] 2025-05-27 21:01:34,797 | INFO     | right removable region: 289
[2025-05-28 03:09:32] 2025-05-27 21:01:34,798 | INFO     | sum of square deviations: 7960482676.996597
[2025-05-28 03:09:32] 2025-05-27 21:01:34,801 | INFO     | sum of deviations: -14138808289.776268
[2025-05-28 03:09:32] 2025-05-27 21:01:34,801 | INFO     | mean x: 1748370575.0033898
[2025-05-28 03:09:32] 2025-05-27 21:01:34,801 | INFO     | mean y: 2496328.7762711863
[2025-05-28 03:09:32] 2025-05-27 21:01:34,801 | INFO     | -- intersect: 3107820136.7021203
[2025-05-28 03:09:32] 2025-05-27 21:01:34,801 | INFO     | intersect: 3107820136.7021203
[2025-05-28 03:09:32] 2025-05-27 21:01:34,802 | INFO     | chi2: 0.8530362053712897
[2025-05-28 03:09:32] 2025-05-27 21:01:34,802 | INFO     | current chi2=0.8530362053712897 (change=62.93579984197323 %)
[2025-05-28 03:09:32] 2025-05-27 21:01:34,802 | INFO     | sum of square deviations: 7562530724.496516
[2025-05-28 03:09:32] 2025-05-27 21:01:34,813 | INFO     | sum of deviations: -10298826084.806896
[2025-05-28 03:09:32] 2025-05-27 21:01:34,814 | INFO     | mean x: 1748370727.5034482
[2025-05-28 03:09:32] 2025-05-27 21:01:34,814 | INFO     | mean y: 2494837.3068965515
[2025-05-28 03:09:32] 2025-05-27 21:01:34,814 | INFO     | -- intersect: 2383465799.3156633
[2025-05-28 03:09:32] 2025-05-27 21:01:34,814 | INFO     | intersect: 2383465799.3156633
[2025-05-28 03:09:32] 2025-05-27 21:01:34,815 | INFO     | chi2: 0.8328722665348014
[2025-05-28 03:09:32] 2025-05-27 21:01:34,815 | INFO     | current chi2=0.8328722665348014 (change=2.363784644722292 %)
[2025-05-28 03:09:32] 2025-05-27 21:01:34,815 | INFO     | left removable region: 20
[2025-05-28 03:09:32] 2025-05-27 21:01:34,815 | INFO     | sum of square deviations: 6035720762.996268
[2025-05-28 03:09:32] 2025-05-27 21:01:34,818 | INFO     | sum of deviations: 12497077678.342005
[2025-05-28 03:09:32] 2025-05-27 21:01:34,818 | INFO     | mean x: 1748370697.0037174
[2025-05-28 03:09:32] 2025-05-27 21:01:34,818 | INFO     | mean y: 2500517.657992565
[2025-05-28 03:09:32] 2025-05-27 21:01:34,818 | INFO     | -- intersect: -3617535144.8509893
[2025-05-28 03:09:32] 2025-05-27 21:01:34,818 | INFO     | intersect: -3617535144.8509893
[2025-05-28 03:09:32] 2025-05-27 21:01:34,819 | INFO     | chi2: 0.0027477503575528725
[2025-05-28 03:09:32] 2025-05-27 21:01:34,819 | INFO     | -- intersect: -3617535144.8509893
[2025-05-28 03:09:32] 2025-05-27 21:01:34,819 | INFO     | current memory leak: 2.07 B/s (using 269 data points, chi2=0.00)
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | ..............................
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . Timing measurements:
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . get job = 0 s
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . initial setup = 6 s
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . payload setup = 17 s
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . stage-in = 0 s
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . payload execution = 18310 s
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . stage-out = 6 s
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | . log creation = 1 s
[2025-05-28 03:09:32] 2025-05-27 21:01:34,820 | INFO     | ..............................
[2025-05-28 03:09:32] 2025-05-27 21:01:35,037 | INFO     | 
[2025-05-28 03:09:32] 2025-05-27 21:01:35,037 | INFO     | job summary report
[2025-05-28 03:09:32] 2025-05-27 21:01:35,037 | INFO     | --------------------------------------------------
[2025-05-28 03:09:32] 2025-05-27 21:01:35,037 | INFO     | PanDA job id: 6666242663
[2025-05-28 03:09:32] 2025-05-27 21:01:35,037 | INFO     | task id: 44871837
[2025-05-28 03:09:32] 2025-05-27 21:01:35,037 | INFO     | errors: (none)
[2025-05-28 03:09:32] 2025-05-27 21:01:35,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | pilot state: finished 
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | transexitcode: 0
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | exeerrorcode: 0
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | exeerrordiag: 
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | exitcode: 0
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | exitmsg: OK
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | cpuconsumptiontime: 70338 s
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | nevents: 400
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | neventsw: 0
[2025-05-28 03:09:32] 2025-05-27 21:01:35,038 | INFO     | pid: 13217
[2025-05-28 03:09:32] 2025-05-27 21:01:35,039 | INFO     | pgrp: 13217
[2025-05-28 03:09:32] 2025-05-27 21:01:35,039 | INFO     | corecount: 8
[2025-05-28 03:09:32] 2025-05-27 21:01:35,039 | INFO     | event service: False
[2025-05-28 03:09:32] 2025-05-27 21:01:35,039 | INFO     | sizes: {0: 2405064, 1: 2405263, 12: 2405263, 23: 2405291, 34: 2405319, 44: 2405347, 55: 2405503, 66: 2405531, 76: 2405765, 77: 2405821, 18332: 2437761, 18339: 2446
[2025-05-28 03:09:32] 2025-05-27 21:01:35,039 | INFO     | --------------------------------------------------
[2025-05-28 03:09:32] 2025-05-27 21:01:35,039 | INFO     | 
[2025-05-28 03:09:32] 2025-05-27 21:01:35,039 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-05-28 03:09:32] 2025-05-27 21:01:35,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 03:09:32] 2025-05-27 21:01:35,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 03:09:32] 2025-05-27 21:01:35,583 | INFO     | job 6666242663 has completed (purged errors)
[2025-05-28 03:09:32] 2025-05-27 21:01:35,583 | INFO     | overall cleanup function is called
[2025-05-28 03:09:32] 2025-05-27 21:01:35,821 | INFO     | PID=4974 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-28 03:09:32] 2025-05-27 21:01:35,821 | INFO     | .. there are 9 such processes running
[2025-05-28 03:09:32] 2025-05-27 21:01:36,593 | INFO     | --- collectZombieJob: --- 10, [13217]
[2025-05-28 03:09:32] 2025-05-27 21:01:36,593 | INFO     | zombie collector waiting for pid 13217
[2025-05-28 03:09:32] 2025-05-27 21:01:36,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 03:09:32] 2025-05-27 21:01:36,593 | INFO     | collected zombie processes
[2025-05-28 03:09:32] 2025-05-27 21:01:36,593 | INFO     | will attempt to kill all subprocesses of pid=13217
[2025-05-28 03:09:32] 2025-05-27 21:01:36,713 | INFO     | process IDs to be killed: [13217] (in reverse order)
[2025-05-28 03:09:32] 2025-05-27 21:01:37,748 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 03:09:32] 2025-05-27 21:01:37,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 03:09:32] 2025-05-27 21:01:37,752 | INFO     | did not find any defunct processes belonging to 13217
[2025-05-28 03:09:32] 2025-05-27 21:01:37,755 | INFO     | did not find any defunct processes belonging to 13217
[2025-05-28 03:09:32] 2025-05-27 21:01:37,756 | INFO     | ready for new job
[2025-05-28 03:09:32] 2025-05-27 21:01:37,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 03:09:32] 2025-05-27 21:01:37,759 | INFO     | **************************************
[2025-05-28 03:09:32] 2025-05-27 21:01:37,759 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 03:09:32] 2025-05-27 21:01:37,759 | INFO     | **************************************
[2025-05-28 03:09:32] 2025-05-27 21:01:37,759 | INFO     | 
[2025-05-28 03:09:32] 2025-05-27 21:01:37,760 | INFO     | pilot is running in a VM
[2025-05-28 03:09:32] 2025-05-27 21:01:37,760 | INFO     | architecture information:
[2025-05-28 03:09:32] 2025-05-27 21:01:37,772 | INFO     | executing command: cat /etc/os-release
[2025-05-28 03:09:32] 2025-05-27 21:01:38,121 | INFO     | cat /etc/os-release:
[2025-05-28 03:09:32] NAME="CentOS Linux"
[2025-05-28 03:09:32] VERSION="7 (Core)"
[2025-05-28 03:09:32] ID="centos"
[2025-05-28 03:09:32] ID_LIKE="rhel fedora"
[2025-05-28 03:09:32] VERSION_ID="7"
[2025-05-28 03:09:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 03:09:32] ANSI_COLOR="0;31"
[2025-05-28 03:09:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 03:09:32] HOME_URL="https://www.centos.org/"
[2025-05-28 03:09:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 03:09:32] 
[2025-05-28 03:09:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 03:09:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 03:09:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 03:09:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 03:09:32] 
[2025-05-28 03:09:32] 2025-05-27 21:01:38,121 | INFO     | **************************************
[2025-05-28 03:09:32] 2025-05-27 21:01:38,624 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-05-28 03:09:32] 2025-05-27 21:01:38,885 | INFO     | sufficient remaining disk space (494921580544 B)
[2025-05-28 03:09:32] 2025-05-27 21:01:38,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 03:09:32] 2025-05-27 21:01:38,885 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 03:09:32] 2025-05-27 21:01:38,885 | INFO     | update_server=False
[2025-05-28 03:09:32] 2025-05-27 21:01:38,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 03:09:32] 2025-05-27 21:01:38,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 03:09:32] 2025-05-27 21:01:38,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 03:09:32] 2025-05-27 21:01:38,887 | INFO     | aborting loop
[2025-05-28 03:09:32] 2025-05-27 21:01:39,052 | INFO     | all job control threads have been joined
[2025-05-28 03:09:32] 2025-05-27 21:01:39,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 03:09:32] 2025-05-27 21:01:39,403 | INFO     | all payload control threads have been joined
[2025-05-28 03:09:32] 2025-05-27 21:01:39,489 | INFO     | all data control threads have been joined
[2025-05-28 03:09:32] 2025-05-27 21:01:39,835 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 03:09:32] 2025-05-27 21:01:39,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 03:09:32] 2025-05-27 21:01:39,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 03:09:32] 2025-05-27 21:01:39,892 | INFO     | [job] retrieve thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:39,893 | INFO     | [job] job monitor thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:39,944 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 03:09:32] 2025-05-27 21:01:40,058 | INFO     | [job] control thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,245 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,409 | INFO     | [payload] control thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,495 | INFO     | [data] control thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,576 | INFO     | [data] copytool_in thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,862 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,893 | INFO     | [data] copytool_out thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,969 | INFO     | [payload] failed_post thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:40,969 | INFO     | [payload] validate_post thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:41,058 | INFO     | [job] queue monitor thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:41,160 | INFO     | [job] validate thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:43,384 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 03:09:32] 2025-05-27 21:01:43,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318281897792)>', '<ExcThread(monitor, started 140317823055616)>']
[2025-05-28 03:09:32] 2025-05-27 21:01:44,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 03:09:32] 2025-05-27 21:01:44,865 | INFO     | [monitor] control thread has ended
[2025-05-28 03:09:32] 2025-05-27 21:01:48,889 | INFO     | all workflow threads have been joined
[2025-05-28 03:09:32] 2025-05-27 21:01:48,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 03:09:32] 2025-05-27 21:01:48,889 | INFO     | traces error code: 0
[2025-05-28 03:09:32] 2025-05-27 21:01:48,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 03:09:32] 2025-05-27 21:01:49,285 [wrapper] ==== pilot stdout END ====
[2025-05-28 03:09:32] 2025-05-27 21:01:49,381 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 03:09:32] 2025-05-27 21:01:49,472 [wrapper] pilotpid: 4974
[2025-05-28 03:09:32] 2025-05-27 21:01:49,529 [wrapper] Pilot exit status: 0
[2025-05-28 03:09:32] 2025-05-27 21:01:49,971 [wrapper] pandaids: 6666242663
[2025-05-28 03:09:32] 2025-05-27 21:01:50,902 [wrapper] cleanup supervisor_pilot 19988 4975
[2025-05-28 03:09:32] 2025-05-27 21:01:51,019 [wrapper] Test setup, not cleaning
[2025-05-28 03:09:32] 2025-05-27 21:01:51,114 [wrapper] apfmon messages muted
[2025-05-28 03:09:32] 2025-05-27 21:01:51,217 [wrapper] ==== wrapper stdout END ====
[2025-05-28 03:09:32] 2025-05-27 21:01:51,298 [wrapper] ==== wrapper stderr END ====
[2025-05-28 03:09:32]  *** Error codes and diagnostics ***
[2025-05-28 03:09:32]     "exeErrorCode": 0,
[2025-05-28 03:09:32]     "exeErrorDiag": "",
[2025-05-28 03:09:32]     "pilotErrorCode": 0,
[2025-05-28 03:09:32]     "pilotErrorDiag": "",
[2025-05-28 03:09:32]  *** Listing of results directory ***
[2025-05-28 03:09:32] total 426816
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc    503527 Apr  3 09:42 pilot3.tar.gz
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc      5111 May 26 23:39 queuedata.json
[2025-05-28 03:09:32] -rwx------. 1 boinc boinc     37140 May 26 23:39 runpilot2-wrapper.sh
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc       100 May 27 17:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 03:09:32] -rwxr-xr-x. 1 boinc boinc      7986 May 27 17:50 run_atlas
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc       105 May 27 17:50 job.xml
[2025-05-28 03:09:32] -rw-r--r--. 2 boinc boinc 227780265 May 27 17:50 EVNT.44871834._002271.pool.root.1
[2025-05-28 03:09:32] -rw-r--r--. 2 boinc boinc     15093 May 27 17:50 start_atlas.sh
[2025-05-28 03:09:32] drwxrwx--x. 2 boinc boinc        68 May 27 17:50 shared
[2025-05-28 03:09:32] -rw-r--r--. 2 boinc boinc    517092 May 27 17:50 input.tar.gz
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc      6373 May 27 17:50 init_data.xml
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc         0 May 27 17:50 boinc_lockfile
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc      2559 May 27 17:50 pandaJob.out
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc    991126 May 27 17:52 agis_schedconf.cvmfs.json
[2025-05-28 03:09:32] drwx------. 4 boinc boinc      4096 May 27 17:52 pilot3
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc 201378121 May 27 22:58 HITS.44871837._057255.pool.root.1
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc       531 May 27 22:58 boinc_task_state.xml
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc      1031 May 27 22:59 memory_monitor_summary.json
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc   1603667 May 27 22:59 agis_ddmendpoints.agis.ALL.json
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc    427934 May 27 23:00 log.44871837._057255.job.log.tgz.1
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc        95 May 27 23:01 pilot_heartbeat.json
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc      7684 May 27 23:01 heartbeat.json
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc      4417 May 27 23:01 pilotlog.txt
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc   1601768 May 27 23:01 log.44871837._057255.job.log.1
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc       357 May 27 23:01 output.list
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc       620 May 27 23:01 runtime_log
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc   2048000 May 27 23:01 result.tar.gz
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc      8673 May 27 23:01 runtime_log.err
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc       657 May 27 23:01 rkkMDmTiud7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcqQKDmL28qEn.diag
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc      8192 May 28 03:09 boinc_mmap_file
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc        28 May 28 03:09 wrapper_checkpoint.txt
[2025-05-28 03:09:32] -rw-r--r--. 1 boinc boinc     20676 May 28 03:09 stderr.txt
[2025-05-28 03:09:32] HITS file was successfully produced:
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc 201378121 May 27 22:58 shared/HITS.pool.root.1
[2025-05-28 03:09:32]  *** Contents of shared directory: ***
[2025-05-28 03:09:32] total 421628
[2025-05-28 03:09:32] -rw-r--r--. 2 boinc boinc 227780265 May 27 17:50 ATLAS.root_0
[2025-05-28 03:09:32] -rw-r--r--. 2 boinc boinc     15093 May 27 17:50 start_atlas.sh
[2025-05-28 03:09:32] -rw-r--r--. 2 boinc boinc    517092 May 27 17:50 input.tar.gz
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc 201378121 May 27 22:58 HITS.pool.root.1
[2025-05-28 03:09:32] -rw-------. 1 boinc boinc   2048000 May 27 23:01 result.tar.gz
03:09:34 (29677): run_atlas exited; CPU time 70590.554919
03:09:34 (29677): called boinc_finish(0)

</stderr_txt>
]]>

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