Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:49:18 (12274): wrapper (7.7.26015): starting
15:49:18 (12274): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 15:49:18] Arguments: --nthreads 8
[2025-05-27 15:49:18] Threads: 8
[2025-05-27 15:49:18] Checking for CVMFS
[2025-05-27 15:49:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 15:49:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 15:49:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 15:49:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 15:49:21] 2.11.2.0 347 21731 89464 146481 1 195 24195197 25165824 4652 130560 0 11918553 99.804 13568520 2396 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 15:49:21] CVMFS is ok
[2025-05-27 15:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 15:49:21] Checking for apptainer binary...
[2025-05-27 15:49:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 15:49:21] Running /usr/bin/apptainer --version
[2025-05-27 15:49:21] apptainer version 1.3.2-1.el7
[2025-05-27 15:49:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 16:19:45] cg-vwn289.simple-grid.lan
[2025-05-27 16:19:45] apptainer works
[2025-05-27 16:19:45] Set ATHENA_PROC_NUMBER=8
[2025-05-27 16:19:45] Set ATHENA_CORE_NUMBER=8
[2025-05-27 16:19:45] Starting ATLAS job with PandaID=6666242134
[2025-05-27 16:19:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 21:39:59]  *** The last 200 lines of the pilot log: ***
[2025-05-27 21:39:59] 2025-05-27 19:35:28,164 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 21:39:59] 2025-05-27 19:35:28,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 21:39:59] 2025-05-27 19:35:28,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 21:39:59] 2025-05-27 19:35:28,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 21:39:59] 2025-05-27 19:35:28,171 | INFO     | fitting pss+swap vs Time
[2025-05-27 21:39:59] 2025-05-27 19:35:28,172 | INFO     | sum of square deviations: 8205826414.5
[2025-05-27 21:39:59] 2025-05-27 19:35:28,175 | INFO     | sum of deviations: 137252151439.49994
[2025-05-27 21:39:59] 2025-05-27 19:35:28,175 | INFO     | mean x: 1748365347.5
[2025-05-27 21:39:59] 2025-05-27 19:35:28,175 | INFO     | mean y: 2439517.298657718
[2025-05-27 21:39:59] 2025-05-27 19:35:28,175 | INFO     | -- intersect: -29241038631.667973
[2025-05-27 21:39:59] 2025-05-27 19:35:28,176 | INFO     | intersect: -29241038631.667973
[2025-05-27 21:39:59] 2025-05-27 19:35:28,176 | INFO     | chi2: 7.2210167315272376
[2025-05-27 21:39:59] 2025-05-27 19:35:28,177 | INFO     | sum of square deviations: 7799669962.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,179 | INFO     | sum of deviations: 154609392993.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,180 | INFO     | mean x: 1748365195.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,180 | INFO     | mean y: 2445933.6211604094
[2025-05-27 21:39:59] 2025-05-27 19:35:28,180 | INFO     | -- intersect: -34654620691.76255
[2025-05-27 21:39:59] 2025-05-27 19:35:28,180 | INFO     | intersect: -34654620691.76255
[2025-05-27 21:39:59] 2025-05-27 19:35:28,181 | INFO     | chi2: 6.495228693509107
[2025-05-27 21:39:59] 2025-05-27 19:35:28,181 | INFO     | current chi2=6.495228693509107 (change=10.051050496106898 %)
[2025-05-27 21:39:59] 2025-05-27 19:35:28,181 | INFO     | right removable region: 292
[2025-05-27 21:39:59] 2025-05-27 19:35:28,181 | INFO     | sum of square deviations: 7799669962.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,184 | INFO     | sum of deviations: 32564036321.00002
[2025-05-27 21:39:59] 2025-05-27 19:35:28,185 | INFO     | mean x: 1748365500.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,185 | INFO     | mean y: 2478801.04778157
[2025-05-27 21:39:59] 2025-05-27 19:35:28,185 | INFO     | -- intersect: -7297040014.71815
[2025-05-27 21:39:59] 2025-05-27 19:35:28,185 | INFO     | intersect: -7297040014.71815
[2025-05-27 21:39:59] 2025-05-27 19:35:28,186 | INFO     | chi2: 2.3396337699261323
[2025-05-27 21:39:59] 2025-05-27 19:35:28,186 | INFO     | current chi2=2.3396337699261323 (change=67.59966280494544 %)
[2025-05-27 21:39:59] 2025-05-27 19:35:28,186 | INFO     | sum of square deviations: 7407141672.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,189 | INFO     | sum of deviations: -22926259580.999996
[2025-05-27 21:39:59] 2025-05-27 19:35:28,190 | INFO     | mean x: 1748365652.5
[2025-05-27 21:39:59] 2025-05-27 19:35:28,190 | INFO     | mean y: 2500280.3680555555
[2025-05-27 21:39:59] 2025-05-27 19:35:28,190 | INFO     | -- intersect: 5413964859.645706
[2025-05-27 21:39:59] 2025-05-27 19:35:28,190 | INFO     | intersect: 5413964859.645706
[2025-05-27 21:39:59] 2025-05-27 19:35:28,190 | INFO     | chi2: 0.8578839059933285
[2025-05-27 21:39:59] 2025-05-27 19:35:28,191 | INFO     | current chi2=0.8578839059933285 (change=63.33255584610518 %)
[2025-05-27 21:39:59] 2025-05-27 19:35:28,191 | INFO     | sum of square deviations: 7028008982.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,194 | INFO     | sum of deviations: -31233864038.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,194 | INFO     | mean x: 1748365805.0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,194 | INFO     | mean y: 2503597.8268551235
[2025-05-27 21:39:59] 2025-05-27 19:35:28,195 | INFO     | -- intersect: 7772587555.02155
[2025-05-27 21:39:59] 2025-05-27 19:35:28,195 | INFO     | intersect: 7772587555.02155
[2025-05-27 21:39:59] 2025-05-27 19:35:28,195 | INFO     | chi2: 0.8054762226019477
[2025-05-27 21:39:59] 2025-05-27 19:35:28,195 | INFO     | current chi2=0.8054762226019477 (change=6.108948195117249 %)
[2025-05-27 21:39:59] 2025-05-27 19:35:28,195 | INFO     | left removable region: 30
[2025-05-27 21:39:59] 2025-05-27 19:35:28,196 | INFO     | sum of square deviations: 5576683165.5
[2025-05-27 21:39:59] 2025-05-27 19:35:28,198 | INFO     | sum of deviations: -6821105430.500001
[2025-05-27 21:39:59] 2025-05-27 19:35:28,198 | INFO     | mean x: 1748366079.5
[2025-05-27 21:39:59] 2025-05-27 19:35:28,198 | INFO     | mean y: 2509198.2251908397
[2025-05-27 21:39:59] 2025-05-27 19:35:28,198 | INFO     | -- intersect: 2141018596.2770689
[2025-05-27 21:39:59] 2025-05-27 19:35:28,199 | INFO     | intersect: 2141018596.2770689
[2025-05-27 21:39:59] 2025-05-27 19:35:28,199 | INFO     | chi2: 0.015030076260251442
[2025-05-27 21:39:59] 2025-05-27 19:35:28,199 | INFO     | -- intersect: 2141018596.2770689
[2025-05-27 21:39:59] 2025-05-27 19:35:28,199 | INFO     | current memory leak: -1.22 B/s (using 262 data points, chi2=0.02)
[2025-05-27 21:39:59] 2025-05-27 19:35:28,200 | INFO     | ..............................
[2025-05-27 21:39:59] 2025-05-27 19:35:28,200 | INFO     | . Timing measurements:
[2025-05-27 21:39:59] 2025-05-27 19:35:28,200 | INFO     | . get job = 0 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,201 | INFO     | . initial setup = 8 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,201 | INFO     | . payload setup = 153 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,201 | INFO     | . stage-in = 0 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,201 | INFO     | . payload execution = 18302 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,201 | INFO     | . stage-out = 4 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,201 | INFO     | . log creation = 1 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,201 | INFO     | ..............................
[2025-05-27 21:39:59] 2025-05-27 19:35:28,728 | INFO     | 
[2025-05-27 21:39:59] 2025-05-27 19:35:28,728 | INFO     | job summary report
[2025-05-27 21:39:59] 2025-05-27 19:35:28,728 | INFO     | --------------------------------------------------
[2025-05-27 21:39:59] 2025-05-27 19:35:28,728 | INFO     | PanDA job id: 6666242134
[2025-05-27 21:39:59] 2025-05-27 19:35:28,728 | INFO     | task id: 44871837
[2025-05-27 21:39:59] 2025-05-27 19:35:28,728 | INFO     | errors: (none)
[2025-05-27 21:39:59] 2025-05-27 19:35:28,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | pilot state: finished 
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | transexitcode: 0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | exeerrorcode: 0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | exeerrordiag: 
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | exitcode: 0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | exitmsg: OK
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | cpuconsumptiontime: 69166 s
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | nevents: 400
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | neventsw: 0
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | pid: 11458
[2025-05-27 21:39:59] 2025-05-27 19:35:28,729 | INFO     | pgrp: 11458
[2025-05-27 21:39:59] 2025-05-27 19:35:28,730 | INFO     | corecount: 8
[2025-05-27 21:39:59] 2025-05-27 19:35:28,730 | INFO     | event service: False
[2025-05-27 21:39:59] 2025-05-27 19:35:28,730 | INFO     | sizes: {0: 2405007, 1: 2405262, 2: 2405262, 12: 2405290, 23: 2405318, 34: 2405346, 45: 2405502, 55: 2405530, 66: 2405558, 77: 2405586, 88: 2405642, 95: 2406156, 98
[2025-05-27 21:39:59] 2025-05-27 19:35:28,730 | INFO     | --------------------------------------------------
[2025-05-27 21:39:59] 2025-05-27 19:35:28,730 | INFO     | 
[2025-05-27 21:39:59] 2025-05-27 19:35:28,730 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-05-27 21:39:59] 2025-05-27 19:35:29,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 21:39:59] 2025-05-27 19:35:29,121 | INFO     | job 6666242134 has completed (purged errors)
[2025-05-27 21:39:59] 2025-05-27 19:35:29,121 | INFO     | overall cleanup function is called
[2025-05-27 21:39:59] 2025-05-27 19:35:29,396 | INFO     | 18743s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-27 21:39:59] 2025-05-27 19:35:30,130 | INFO     | --- collectZombieJob: --- 10, [11458]
[2025-05-27 21:39:59] 2025-05-27 19:35:30,130 | INFO     | zombie collector waiting for pid 11458
[2025-05-27 21:39:59] 2025-05-27 19:35:30,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 21:39:59] 2025-05-27 19:35:30,130 | INFO     | collected zombie processes
[2025-05-27 21:39:59] 2025-05-27 19:35:30,130 | INFO     | will attempt to kill all subprocesses of pid=11458
[2025-05-27 21:39:59] 2025-05-27 19:35:30,285 | INFO     | process IDs to be killed: [11458] (in reverse order)
[2025-05-27 21:39:59] 2025-05-27 19:35:30,372 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 21:39:59] 2025-05-27 19:35:30,373 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 21:39:59] 2025-05-27 19:35:30,376 | INFO     | did not find any defunct processes belonging to 11458
[2025-05-27 21:39:59] 2025-05-27 19:35:30,379 | INFO     | did not find any defunct processes belonging to 11458
[2025-05-27 21:39:59] 2025-05-27 19:35:30,379 | INFO     | ready for new job
[2025-05-27 21:39:59] 2025-05-27 19:35:30,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 21:39:59] 2025-05-27 19:35:30,381 | INFO     | **************************************
[2025-05-27 21:39:59] 2025-05-27 19:35:30,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 21:39:59] 2025-05-27 19:35:30,382 | INFO     | **************************************
[2025-05-27 21:39:59] 2025-05-27 19:35:30,382 | INFO     | 
[2025-05-27 21:39:59] 2025-05-27 19:35:30,382 | INFO     | pilot is running in a VM
[2025-05-27 21:39:59] 2025-05-27 19:35:30,382 | INFO     | architecture information:
[2025-05-27 21:39:59] 2025-05-27 19:35:30,388 | INFO     | executing command: cat /etc/os-release
[2025-05-27 21:39:59] 2025-05-27 19:35:30,629 | INFO     | cat /etc/os-release:
[2025-05-27 21:39:59] NAME="CentOS Linux"
[2025-05-27 21:39:59] VERSION="7 (Core)"
[2025-05-27 21:39:59] ID="centos"
[2025-05-27 21:39:59] ID_LIKE="rhel fedora"
[2025-05-27 21:39:59] VERSION_ID="7"
[2025-05-27 21:39:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 21:39:59] ANSI_COLOR="0;31"
[2025-05-27 21:39:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 21:39:59] HOME_URL="https://www.centos.org/"
[2025-05-27 21:39:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 21:39:59] 
[2025-05-27 21:39:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 21:39:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 21:39:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 21:39:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 21:39:59] 
[2025-05-27 21:39:59] 2025-05-27 19:35:30,630 | INFO     | **************************************
[2025-05-27 21:39:59] 2025-05-27 19:35:31,133 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-05-27 21:39:59] 2025-05-27 19:35:31,403 | INFO     | sufficient remaining disk space (495712206848 B)
[2025-05-27 21:39:59] 2025-05-27 19:35:31,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 21:39:59] 2025-05-27 19:35:31,403 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 21:39:59] 2025-05-27 19:35:31,403 | INFO     | update_server=False
[2025-05-27 21:39:59] 2025-05-27 19:35:31,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 21:39:59] 2025-05-27 19:35:31,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 21:39:59] 2025-05-27 19:35:31,405 | INFO     | aborting loop
[2025-05-27 21:39:59] 2025-05-27 19:35:31,410 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 21:39:59] 2025-05-27 19:35:31,410 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 21:39:59] 2025-05-27 19:35:31,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 21:39:59] 2025-05-27 19:35:31,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 21:39:59] 2025-05-27 19:35:31,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 21:39:59] 2025-05-27 19:35:31,454 | INFO     | all payload control threads have been joined
[2025-05-27 21:39:59] 2025-05-27 19:35:31,671 | INFO     | all data control threads have been joined
[2025-05-27 21:39:59] 2025-05-27 19:35:32,410 | INFO     | [job] retrieve thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,411 | INFO     | [job] job monitor thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,460 | INFO     | [payload] control thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,588 | INFO     | [job] validate thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,621 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,678 | INFO     | [data] control thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,782 | INFO     | [payload] validate_post thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:32,902 | INFO     | all job control threads have been joined
[2025-05-27 21:39:59] 2025-05-27 19:35:33,164 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 21:39:59] 2025-05-27 19:35:33,248 | INFO     | [payload] failed_post thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:33,306 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:33,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 21:39:59] 2025-05-27 19:35:33,419 | INFO     | [data] copytool_out thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:33,571 | INFO     | [data] copytool_in thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:33,759 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:33,908 | INFO     | [job] control thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:34,352 | INFO     | [job] queue monitor thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:37,173 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 21:39:59] 2025-05-27 19:35:37,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660923991872)>', '<ExcThread(monitor, started 139660114257664)>']
[2025-05-27 21:39:59] 2025-05-27 19:35:38,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 21:39:59] 2025-05-27 19:35:38,450 | INFO     | [monitor] control thread has ended
[2025-05-27 21:39:59] 2025-05-27 19:35:42,727 | INFO     | all workflow threads have been joined
[2025-05-27 21:39:59] 2025-05-27 19:35:42,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 21:39:59] 2025-05-27 19:35:42,727 | INFO     | traces error code: 0
[2025-05-27 21:39:59] 2025-05-27 19:35:42,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 21:39:59] 2025-05-27 19:35:43,082 [wrapper] ==== pilot stdout END ====
[2025-05-27 21:39:59] 2025-05-27 19:35:43,146 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 21:39:59] 2025-05-27 19:35:43,209 [wrapper] pilotpid: 817
[2025-05-27 21:39:59] 2025-05-27 19:35:43,311 [wrapper] Pilot exit status: 0
[2025-05-27 21:39:59] 2025-05-27 19:35:43,810 [wrapper] pandaids: 6666242134
[2025-05-27 21:39:59] 2025-05-27 19:35:44,583 [wrapper] cleanup supervisor_pilot  3262 818
[2025-05-27 21:39:59] 2025-05-27 19:35:44,663 [wrapper] Test setup, not cleaning
[2025-05-27 21:39:59] 2025-05-27 19:35:44,710 [wrapper] apfmon messages muted
[2025-05-27 21:39:59] 2025-05-27 19:35:44,747 [wrapper] ==== wrapper stdout END ====
[2025-05-27 21:39:59] 2025-05-27 19:35:44,832 [wrapper] ==== wrapper stderr END ====
[2025-05-27 21:39:59]  *** Error codes and diagnostics ***
[2025-05-27 21:39:59]     "exeErrorCode": 0,
[2025-05-27 21:39:59]     "exeErrorDiag": "",
[2025-05-27 21:39:59]     "pilotErrorCode": 0,
[2025-05-27 21:39:59]     "pilotErrorDiag": "",
[2025-05-27 21:39:59]  *** Listing of results directory ***
[2025-05-27 21:39:59] total 414144
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc    495897 May 26 23:09 pilot3.tar.gz
[2025-05-27 21:39:59] -rwx------. 1 boinc boinc     37140 May 26 23:22 runpilot2-wrapper.sh
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc      5111 May 26 23:22 queuedata.json
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc       100 May 27 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 21:39:59] -rwxr-xr-x. 1 boinc boinc      7986 May 27 15:49 run_atlas
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc       105 May 27 15:49 job.xml
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc      6371 May 27 15:49 init_data.xml
[2025-05-27 21:39:59] -rw-r--r--. 2 boinc boinc 222279151 May 27 15:49 EVNT.44871834._002261.pool.root.1
[2025-05-27 21:39:59] -rw-r--r--. 2 boinc boinc     15093 May 27 15:49 start_atlas.sh
[2025-05-27 21:39:59] drwxrwx--x. 2 boinc boinc        68 May 27 15:49 shared
[2025-05-27 21:39:59] -rw-r--r--. 2 boinc boinc    508874 May 27 15:49 input.tar.gz
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc         0 May 27 15:49 boinc_lockfile
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc      2559 May 27 16:19 pandaJob.out
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc    990967 May 27 16:23 agis_schedconf.cvmfs.json
[2025-05-27 21:39:59] drwx------. 4 boinc boinc      4096 May 27 16:23 pilot3
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc 193983773 May 27 21:32 HITS.44871837._056998.pool.root.1
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc       531 May 27 21:32 boinc_task_state.xml
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc      1014 May 27 21:33 memory_monitor_summary.json
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc   1603667 May 27 21:33 agis_ddmendpoints.agis.ALL.json
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc    412953 May 27 21:34 log.44871837._056998.job.log.tgz.1
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc        95 May 27 21:34 pilot_heartbeat.json
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc      7687 May 27 21:35 heartbeat.json
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc      4539 May 27 21:35 pilotlog.txt
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc   1584901 May 27 21:35 log.44871837._056998.job.log.1
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc       357 May 27 21:35 output.list
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc       620 May 27 21:35 runtime_log
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc   2017280 May 27 21:35 result.tar.gz
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc      8659 May 27 21:35 runtime_log.err
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc       657 May 27 21:35 llCLDmRSud7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7nQKDmg3v3In.diag
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc      8192 May 27 21:39 boinc_mmap_file
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc        28 May 27 21:39 wrapper_checkpoint.txt
[2025-05-27 21:39:59] -rw-r--r--. 1 boinc boinc     20546 May 27 21:39 stderr.txt
[2025-05-27 21:39:59] HITS file was successfully produced:
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc 193983773 May 27 21:32 shared/HITS.pool.root.1
[2025-05-27 21:39:59]  *** Contents of shared directory: ***
[2025-05-27 21:39:59] total 409000
[2025-05-27 21:39:59] -rw-r--r--. 2 boinc boinc 222279151 May 27 15:49 ATLAS.root_0
[2025-05-27 21:39:59] -rw-r--r--. 2 boinc boinc     15093 May 27 15:49 start_atlas.sh
[2025-05-27 21:39:59] -rw-r--r--. 2 boinc boinc    508874 May 27 15:49 input.tar.gz
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc 193983773 May 27 21:32 HITS.pool.root.1
[2025-05-27 21:39:59] -rw-------. 1 boinc boinc   2017280 May 27 21:35 result.tar.gz
21:40:01 (12274): run_atlas exited; CPU time 69427.529822
21:40:01 (12274): called boinc_finish(0)

</stderr_txt>
]]>

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