Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:56:31 (24238): wrapper (7.7.26015): starting
21:56:31 (24238): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 21:56:31] Arguments: --nthreads 8
[2025-05-27 21:56:31] Threads: 8
[2025-05-27 21:56:31] Checking for CVMFS
[2025-05-27 21:56:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 21:56:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 21:56:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 21:56:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 21:56:32] 2.11.2.0 20015 22146 89400 146491 0 16 13606004 25165825 4238 130560 0 12013235 99.801 13899805 1643 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 21:56:32] CVMFS is ok
[2025-05-27 21:56:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 21:56:32] Checking for apptainer binary...
[2025-05-27 21:56:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 21:56:32] Running /usr/bin/apptainer --version
[2025-05-27 21:56:32] apptainer version 1.3.2-1.el7
[2025-05-27 21:56:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 22:27:08] cg-vwn356.simple-grid.lan
[2025-05-27 22:27:08] apptainer works
[2025-05-27 22:27:08] Set ATHENA_PROC_NUMBER=8
[2025-05-27 22:27:08] Set ATHENA_CORE_NUMBER=8
[2025-05-27 22:27:08] Starting ATLAS job with PandaID=6665990235
[2025-05-27 22:27:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 04:09:26]  *** The last 200 lines of the pilot log: ***
[2025-05-28 04:09:26] 2025-05-28 02:08:22,105 | INFO     | extracted standard info from prmon json
[2025-05-28 04:09:26] 2025-05-28 02:08:22,105 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 04:09:26] 2025-05-28 02:08:22,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 04:09:26] 2025-05-28 02:08:22,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 04:09:26] 2025-05-28 02:08:22,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 04:09:26] 2025-05-28 02:08:22,113 | INFO     | fitting pss+swap vs Time
[2025-05-28 04:09:26] 2025-05-28 02:08:22,114 | INFO     | sum of square deviations: 10546523325.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,118 | INFO     | sum of deviations: 91472094482.4999
[2025-05-28 04:09:26] 2025-05-28 02:08:22,118 | INFO     | mean x: 1748388138.5
[2025-05-28 04:09:26] 2025-05-28 02:08:22,118 | INFO     | mean y: 2464297.7932098764
[2025-05-28 04:09:26] 2025-05-28 02:08:22,118 | INFO     | -- intersect: -15161653778.715584
[2025-05-28 04:09:26] 2025-05-28 02:08:22,118 | INFO     | intersect: -15161653778.715584
[2025-05-28 04:09:26] 2025-05-28 02:08:22,119 | INFO     | chi2: 6.413911475141469
[2025-05-28 04:09:26] 2025-05-28 02:08:22,119 | INFO     | sum of square deviations: 10065751520.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,123 | INFO     | sum of deviations: 111196476477.00002
[2025-05-28 04:09:26] 2025-05-28 02:08:22,123 | INFO     | mean x: 1748387986.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,123 | INFO     | mean y: 2470468.799373041
[2025-05-28 04:09:26] 2025-05-28 02:08:22,123 | INFO     | -- intersect: -19311992358.10721
[2025-05-28 04:09:26] 2025-05-28 02:08:22,123 | INFO     | intersect: -19311992358.10721
[2025-05-28 04:09:26] 2025-05-28 02:08:22,124 | INFO     | chi2: 5.681944484847126
[2025-05-28 04:09:26] 2025-05-28 02:08:22,124 | INFO     | current chi2=5.681944484847126 (change=11.41217793746052 %)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,124 | INFO     | right removable region: 318
[2025-05-28 04:09:26] 2025-05-28 02:08:22,125 | INFO     | sum of square deviations: 10065751520.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,128 | INFO     | sum of deviations: -19745098174.000004
[2025-05-28 04:09:26] 2025-05-28 02:08:22,128 | INFO     | mean x: 1748388291.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,128 | INFO     | mean y: 2499549.962382445
[2025-05-28 04:09:26] 2025-05-28 02:08:22,129 | INFO     | -- intersect: 3432158863.87192
[2025-05-28 04:09:26] 2025-05-28 02:08:22,129 | INFO     | intersect: 3432158863.87192
[2025-05-28 04:09:26] 2025-05-28 02:08:22,129 | INFO     | chi2: 1.8970205974469871
[2025-05-28 04:09:26] 2025-05-28 02:08:22,129 | INFO     | current chi2=1.8970205974469871 (change=70.42334299749365 %)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,130 | INFO     | sum of square deviations: 9599817202.5
[2025-05-28 04:09:26] 2025-05-28 02:08:22,133 | INFO     | sum of deviations: -62945073480.5
[2025-05-28 04:09:26] 2025-05-28 02:08:22,133 | INFO     | mean x: 1748388443.5
[2025-05-28 04:09:26] 2025-05-28 02:08:22,133 | INFO     | mean y: 2513617.168789809
[2025-05-28 04:09:26] 2025-05-28 02:08:22,133 | INFO     | -- intersect: 11466527642.34257
[2025-05-28 04:09:26] 2025-05-28 02:08:22,133 | INFO     | intersect: 11466527642.34257
[2025-05-28 04:09:26] 2025-05-28 02:08:22,134 | INFO     | chi2: 0.9971100664616291
[2025-05-28 04:09:26] 2025-05-28 02:08:22,134 | INFO     | current chi2=0.9971100664616291 (change=47.43810015539414 %)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,135 | INFO     | sum of square deviations: 9148487810.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,138 | INFO     | sum of deviations: -63005969323.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,138 | INFO     | mean x: 1748388596.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,138 | INFO     | mean y: 2513621.7702265372
[2025-05-28 04:09:26] 2025-05-28 02:08:22,138 | INFO     | -- intersect: 12043729671.033241
[2025-05-28 04:09:26] 2025-05-28 02:08:22,138 | INFO     | intersect: 12043729671.033241
[2025-05-28 04:09:26] 2025-05-28 02:08:22,139 | INFO     | chi2: 0.9836299213676182
[2025-05-28 04:09:26] 2025-05-28 02:08:22,139 | INFO     | current chi2=0.9836299213676182 (change=1.3519214726060242 %)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,139 | INFO     | left removable region: 30
[2025-05-28 04:09:26] 2025-05-28 02:08:22,140 | INFO     | sum of square deviations: 7407141672.0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,142 | INFO     | sum of deviations: -10378193946.999998
[2025-05-28 04:09:26] 2025-05-28 02:08:22,142 | INFO     | mean x: 1748388870.5
[2025-05-28 04:09:26] 2025-05-28 02:08:22,143 | INFO     | mean y: 2509103.0208333335
[2025-05-28 04:09:26] 2025-05-28 02:08:22,143 | INFO     | -- intersect: 2452188020.5196404
[2025-05-28 04:09:26] 2025-05-28 02:08:22,143 | INFO     | intersect: 2452188020.5196404
[2025-05-28 04:09:26] 2025-05-28 02:08:22,143 | INFO     | chi2: 0.10340108220540117
[2025-05-28 04:09:26] 2025-05-28 02:08:22,144 | INFO     | -- intersect: 2452188020.5196404
[2025-05-28 04:09:26] 2025-05-28 02:08:22,144 | INFO     | current memory leak: -1.40 B/s (using 288 data points, chi2=0.10)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | ..............................
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . Timing measurements:
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . get job = 0 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . initial setup = 10 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . payload setup = 153 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . stage-in = 0 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . payload execution = 19869 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . stage-out = 5 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | . log creation = 0 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,145 | INFO     | ..............................
[2025-05-28 04:09:26] 2025-05-28 02:08:22,264 | INFO     | 
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | job summary report
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | --------------------------------------------------
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | PanDA job id: 6665990235
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | task id: 44871837
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | errors: (none)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | pilot state: finished 
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | transexitcode: 0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | exeerrorcode: 0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | exeerrordiag: 
[2025-05-28 04:09:26] 2025-05-28 02:08:22,265 | INFO     | exitcode: 0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | exitmsg: OK
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | cpuconsumptiontime: 74033 s
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | nevents: 400
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | neventsw: 0
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | pid: 24522
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | pgrp: 24522
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | corecount: 8
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | event service: False
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | sizes: {0: 2404406, 1: 2405091, 2: 2405262, 12: 2405290, 23: 2405318, 34: 2405346, 45: 2405502, 55: 2405530, 66: 2405558, 77: 2405586, 87: 2405788, 88: 2406156, 98
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | --------------------------------------------------
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | 
[2025-05-28 04:09:26] 2025-05-28 02:08:22,266 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-28 04:09:26] 2025-05-28 02:08:22,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,348 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 04:09:26] 2025-05-28 02:08:22,349 | INFO     | job 6665990235 has completed (purged errors)
[2025-05-28 04:09:26] 2025-05-28 02:08:22,349 | INFO     | overall cleanup function is called
[2025-05-28 04:09:26] 2025-05-28 02:08:23,360 | INFO     | --- collectZombieJob: --- 10, [24522]
[2025-05-28 04:09:26] 2025-05-28 02:08:23,360 | INFO     | zombie collector waiting for pid 24522
[2025-05-28 04:09:26] 2025-05-28 02:08:23,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 04:09:26] 2025-05-28 02:08:23,361 | INFO     | collected zombie processes
[2025-05-28 04:09:26] 2025-05-28 02:08:23,361 | INFO     | will attempt to kill all subprocesses of pid=24522
[2025-05-28 04:09:26] 2025-05-28 02:08:23,468 | INFO     | process IDs to be killed: [24522] (in reverse order)
[2025-05-28 04:09:26] 2025-05-28 02:08:24,213 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 04:09:26] 2025-05-28 02:08:24,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 04:09:26] 2025-05-28 02:08:24,217 | INFO     | did not find any defunct processes belonging to 24522
[2025-05-28 04:09:26] 2025-05-28 02:08:24,219 | INFO     | did not find any defunct processes belonging to 24522
[2025-05-28 04:09:26] 2025-05-28 02:08:24,220 | INFO     | ready for new job
[2025-05-28 04:09:26] 2025-05-28 02:08:24,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 04:09:26] 2025-05-28 02:08:24,222 | INFO     | **************************************
[2025-05-28 04:09:26] 2025-05-28 02:08:24,222 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 04:09:26] 2025-05-28 02:08:24,222 | INFO     | **************************************
[2025-05-28 04:09:26] 2025-05-28 02:08:24,222 | INFO     | 
[2025-05-28 04:09:26] 2025-05-28 02:08:24,223 | INFO     | pilot is running in a VM
[2025-05-28 04:09:26] 2025-05-28 02:08:24,223 | INFO     | architecture information:
[2025-05-28 04:09:26] 2025-05-28 02:08:24,228 | INFO     | executing command: cat /etc/os-release
[2025-05-28 04:09:26] 2025-05-28 02:08:24,392 | INFO     | cat /etc/os-release:
[2025-05-28 04:09:26] NAME="CentOS Linux"
[2025-05-28 04:09:26] VERSION="7 (Core)"
[2025-05-28 04:09:26] ID="centos"
[2025-05-28 04:09:26] ID_LIKE="rhel fedora"
[2025-05-28 04:09:26] VERSION_ID="7"
[2025-05-28 04:09:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 04:09:26] ANSI_COLOR="0;31"
[2025-05-28 04:09:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 04:09:26] HOME_URL="https://www.centos.org/"
[2025-05-28 04:09:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 04:09:26] 
[2025-05-28 04:09:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 04:09:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 04:09:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 04:09:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 04:09:26] 
[2025-05-28 04:09:26] 2025-05-28 02:08:24,393 | INFO     | **************************************
[2025-05-28 04:09:26] 2025-05-28 02:08:24,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-28 04:09:26] 2025-05-28 02:08:25,048 | INFO     | sufficient remaining disk space (494919483392 B)
[2025-05-28 04:09:26] 2025-05-28 02:08:25,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 04:09:26] 2025-05-28 02:08:25,049 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 04:09:26] 2025-05-28 02:08:25,049 | INFO     | update_server=False
[2025-05-28 04:09:26] 2025-05-28 02:08:25,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 04:09:26] 2025-05-28 02:08:25,049 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 04:09:26] 2025-05-28 02:08:25,049 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 04:09:26] 2025-05-28 02:08:25,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 04:09:26] 2025-05-28 02:08:25,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 04:09:26] 2025-05-28 02:08:25,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 04:09:26] 2025-05-28 02:08:25,056 | INFO     | aborting loop
[2025-05-28 04:09:26] 2025-05-28 02:08:25,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 04:09:26] 2025-05-28 02:08:25,300 | INFO     | all job control threads have been joined
[2025-05-28 04:09:26] 2025-05-28 02:08:25,788 | INFO     | all data control threads have been joined
[2025-05-28 04:09:26] 2025-05-28 02:08:25,955 | INFO     | all payload control threads have been joined
[2025-05-28 04:09:26] 2025-05-28 02:08:26,054 | INFO     | [job] retrieve thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,062 | INFO     | [job] job monitor thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,307 | INFO     | [job] control thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,703 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,708 | INFO     | [payload] validate_post thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,757 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,795 | INFO     | [data] control thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,956 | INFO     | [payload] failed_post thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:26,961 | INFO     | [payload] control thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:27,064 | INFO     | [data] copytool_out thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:27,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 04:09:26] 2025-05-28 02:08:27,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 04:09:26] 2025-05-28 02:08:27,317 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:27,402 | INFO     | [job] validate thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:27,403 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:27,443 | INFO     | [data] copytool_in thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:28,287 | INFO     | [job] queue monitor thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:31,292 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 04:09:26] 2025-05-28 02:08:32,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002246256448)>', '<ExcThread(monitor, started 140001790629632)>']
[2025-05-28 04:09:26] 2025-05-28 02:08:33,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 04:09:26] 2025-05-28 02:08:33,096 | INFO     | [monitor] control thread has ended
[2025-05-28 04:09:26] 2025-05-28 02:08:37,571 | INFO     | all workflow threads have been joined
[2025-05-28 04:09:26] 2025-05-28 02:08:37,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 04:09:26] 2025-05-28 02:08:37,572 | INFO     | traces error code: 0
[2025-05-28 04:09:26] 2025-05-28 02:08:37,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 04:09:26] 2025-05-28 02:08:37,748 [wrapper] ==== pilot stdout END ====
[2025-05-28 04:09:26] 2025-05-28 02:08:37,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 04:09:26] 2025-05-28 02:08:37,812 [wrapper] pilotpid: 13911
[2025-05-28 04:09:26] 2025-05-28 02:08:37,885 [wrapper] Pilot exit status: 0
[2025-05-28 04:09:26] 2025-05-28 02:08:38,210 [wrapper] pandaids: 6665990235
[2025-05-28 04:09:26] 2025-05-28 02:08:38,737 [wrapper] cleanup supervisor_pilot 20706 13912
[2025-05-28 04:09:26] 2025-05-28 02:08:38,821 [wrapper] Test setup, not cleaning
[2025-05-28 04:09:26] 2025-05-28 02:08:38,944 [wrapper] apfmon messages muted
[2025-05-28 04:09:26] 2025-05-28 02:08:38,993 [wrapper] ==== wrapper stdout END ====
[2025-05-28 04:09:26] 2025-05-28 02:08:39,088 [wrapper] ==== wrapper stderr END ====
[2025-05-28 04:09:26]  *** Error codes and diagnostics ***
[2025-05-28 04:09:26]     "exeErrorCode": 0,
[2025-05-28 04:09:26]     "exeErrorDiag": "",
[2025-05-28 04:09:26]     "pilotErrorCode": 0,
[2025-05-28 04:09:26]     "pilotErrorDiag": "",
[2025-05-28 04:09:26]  *** Listing of results directory ***
[2025-05-28 04:09:26] total 420376
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc    495897 May 26 15:12 pilot3.tar.gz
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc      5111 May 26 15:38 queuedata.json
[2025-05-28 04:09:26] -rwx------. 1 boinc boinc     37140 May 26 15:40 runpilot2-wrapper.sh
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc       100 May 27 21:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 04:09:26] -rwxr-xr-x. 1 boinc boinc      7986 May 27 21:56 run_atlas
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc       105 May 27 21:56 job.xml
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc      6372 May 27 21:56 init_data.xml
[2025-05-28 04:09:26] -rw-r--r--. 2 boinc boinc 223197549 May 27 21:56 EVNT.44871834._002057.pool.root.1
[2025-05-28 04:09:26] -rw-r--r--. 2 boinc boinc     15093 May 27 21:56 start_atlas.sh
[2025-05-28 04:09:26] drwxrwx--x. 2 boinc boinc        68 May 27 21:56 shared
[2025-05-28 04:09:26] -rw-r--r--. 2 boinc boinc    508880 May 27 21:56 input.tar.gz
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc         0 May 27 21:56 boinc_lockfile
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc      2559 May 27 22:27 pandaJob.out
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc    991111 May 27 22:30 agis_schedconf.cvmfs.json
[2025-05-28 04:09:26] drwx------. 4 boinc boinc      4096 May 27 22:30 pilot3
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc 199115985 May 28 04:06 HITS.44871837._051689.pool.root.1
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc       531 May 28 04:06 boinc_task_state.xml
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc      1033 May 28 04:06 memory_monitor_summary.json
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc   1603667 May 28 04:06 agis_ddmendpoints.agis.ALL.json
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc    440370 May 28 04:06 log.44871837._051689.job.log.tgz.1
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc        95 May 28 04:08 pilot_heartbeat.json
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc      7692 May 28 04:08 heartbeat.json
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc      4539 May 28 04:08 pilotlog.txt
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc   1718335 May 28 04:08 log.44871837._051689.job.log.1
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc       357 May 28 04:08 output.list
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc       620 May 28 04:08 runtime_log
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc   2181120 May 28 04:08 result.tar.gz
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc      8659 May 28 04:08 runtime_log.err
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc       658 May 28 04:08 a6cMDm2End7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmouWKDmIiwUkn.diag
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc      8192 May 28 04:09 boinc_mmap_file
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc        28 May 28 04:09 wrapper_checkpoint.txt
[2025-05-28 04:09:26] -rw-r--r--. 1 boinc boinc     20516 May 28 04:09 stderr.txt
[2025-05-28 04:09:26] HITS file was successfully produced:
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc 199115985 May 28 04:06 shared/HITS.pool.root.1
[2025-05-28 04:09:26]  *** Contents of shared directory: ***
[2025-05-28 04:09:26] total 415068
[2025-05-28 04:09:26] -rw-r--r--. 2 boinc boinc 223197549 May 27 21:56 ATLAS.root_0
[2025-05-28 04:09:26] -rw-r--r--. 2 boinc boinc     15093 May 27 21:56 start_atlas.sh
[2025-05-28 04:09:26] -rw-r--r--. 2 boinc boinc    508880 May 27 21:56 input.tar.gz
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc 199115985 May 28 04:06 HITS.pool.root.1
[2025-05-28 04:09:26] -rw-------. 1 boinc boinc   2181120 May 28 04:08 result.tar.gz
04:09:28 (24238): run_atlas exited; CPU time 74304.916370
04:09:28 (24238): called boinc_finish(0)

</stderr_txt>
]]>

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