Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:41:34 (4025529): wrapper (7.7.26015): starting
22:41:34 (4025529): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 22:41:34] Arguments: --nthreads 8
[2025-05-26 22:41:34] Threads: 8
[2025-05-26 22:41:34] Checking for CVMFS
[2025-05-26 22:41:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 22:41:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 22:41:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 22:41:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 22:41:36] 2.12.6.0 1699072 11186 314908 146465 0 414 27557666 32935936 26681 16776704 0 55554972 99.579 57857141 28891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-26 22:41:36] CVMFS is ok
[2025-05-26 22:41:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 22:41:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 22:41:36] Further information can be found at the LHC@home message board.
[2025-05-26 22:41:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 22:41:36] Checking for apptainer binary...
[2025-05-26 22:41:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 22:41:36] Running /usr/bin/apptainer --version
[2025-05-26 22:41:36] apptainer version 1.4.1-1.el9
[2025-05-26 22:41:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 22:41:36] c6-2-11-3.aglt2.org
[2025-05-26 22:41:36] apptainer works
[2025-05-26 22:41:36] Set ATHENA_PROC_NUMBER=8
[2025-05-26 22:41:36] Set ATHENA_CORE_NUMBER=8
[2025-05-26 22:41:37] Starting ATLAS job with PandaID=6666242093
[2025-05-26 22:41:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 02:53:19]  *** The last 200 lines of the pilot log: ***
[2025-05-27 02:53:19] 2025-05-27 06:53:00,246 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 02:53:19] 2025-05-27 06:53:00,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 02:53:19] 2025-05-27 06:53:00,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 02:53:19] 2025-05-27 06:53:00,247 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 02:53:19] 2025-05-27 06:53:00,280 | INFO     | fitting pss+swap vs Time
[2025-05-27 02:53:19] 2025-05-27 06:53:00,281 | INFO     | sum of square deviations: 4504232307.2131
[2025-05-27 02:53:19] 2025-05-27 06:53:00,291 | INFO     | sum of deviations: 45101634618.50822
[2025-05-27 02:53:19] 2025-05-27 06:53:00,291 | INFO     | mean x: 1748321273.737705
[2025-05-27 02:53:19] 2025-05-27 06:53:00,291 | INFO     | mean y: 2113905.5860655736
[2025-05-27 02:53:19] 2025-05-27 06:53:00,291 | INFO     | -- intersect: -17504120654.653786
[2025-05-27 02:53:19] 2025-05-27 06:53:00,291 | INFO     | intersect: -17504120654.653786
[2025-05-27 02:53:19] 2025-05-27 06:53:00,292 | INFO     | chi2: 2.4646387971347656
[2025-05-27 02:53:19] 2025-05-27 06:53:00,300 | INFO     | sum of square deviations: 4232970491.92469
[2025-05-27 02:53:19] 2025-05-27 06:53:00,302 | INFO     | sum of deviations: 49972320017.58162
[2025-05-27 02:53:19] 2025-05-27 06:53:00,302 | INFO     | mean x: 1748321121.242678
[2025-05-27 02:53:19] 2025-05-27 06:53:00,302 | INFO     | mean y: 2116618.9037656905
[2025-05-27 02:53:19] 2025-05-27 06:53:00,302 | INFO     | -- intersect: -20637682957.046265
[2025-05-27 02:53:19] 2025-05-27 06:53:00,302 | INFO     | intersect: -20637682957.046265
[2025-05-27 02:53:19] 2025-05-27 06:53:00,303 | INFO     | chi2: 2.421027404825273
[2025-05-27 02:53:19] 2025-05-27 06:53:00,303 | INFO     | current chi2=2.421027404825273 (change=1.769484127255994 %)
[2025-05-27 02:53:19] 2025-05-27 06:53:00,305 | INFO     | right removable region: 238
[2025-05-27 02:53:19] 2025-05-27 06:53:00,305 | INFO     | sum of square deviations: 4232949751.4058466
[2025-05-27 02:53:19] 2025-05-27 06:53:00,307 | INFO     | sum of deviations: -298293483.9079485
[2025-05-27 02:53:19] 2025-05-27 06:53:00,307 | INFO     | mean x: 1748321426.2384937
[2025-05-27 02:53:19] 2025-05-27 06:53:00,307 | INFO     | mean y: 2139307.0334728034
[2025-05-27 02:53:19] 2025-05-27 06:53:00,307 | INFO     | -- intersect: 125342491.53864887
[2025-05-27 02:53:19] 2025-05-27 06:53:00,307 | INFO     | intersect: 125342491.53864887
[2025-05-27 02:53:19] 2025-05-27 06:53:00,308 | INFO     | chi2: 0.3892912115060514
[2025-05-27 02:53:19] 2025-05-27 06:53:00,331 | INFO     | current chi2=0.3892912115060514 (change=84.2049385914635 %)
[2025-05-27 02:53:19] 2025-05-27 06:53:00,332 | INFO     | sum of square deviations: 3972813084.0384693
[2025-05-27 02:53:19] 2025-05-27 06:53:00,333 | INFO     | sum of deviations: -9270769559.884611
[2025-05-27 02:53:19] 2025-05-27 06:53:00,334 | INFO     | mean x: 1748321578.7307692
[2025-05-27 02:53:19] 2025-05-27 06:53:00,334 | INFO     | mean y: 2144493.858974359
[2025-05-27 02:53:19] 2025-05-27 06:53:00,334 | INFO     | -- intersect: 4081945413.2897143
[2025-05-27 02:53:19] 2025-05-27 06:53:00,334 | INFO     | intersect: 4081945413.2897143
[2025-05-27 02:53:19] 2025-05-27 06:53:00,334 | INFO     | chi2: 0.22335356730976985
[2025-05-27 02:53:19] 2025-05-27 06:53:00,335 | INFO     | current chi2=0.22335356730976985 (change=42.62558190160995 %)
[2025-05-27 02:53:19] 2025-05-27 06:53:00,335 | INFO     | sum of square deviations: 3723531916.7336397
[2025-05-27 02:53:19] 2025-05-27 06:53:00,358 | INFO     | sum of deviations: -5118696960.104801
[2025-05-27 02:53:19] 2025-05-27 06:53:00,358 | INFO     | mean x: 1748321731.231441
[2025-05-27 02:53:19] 2025-05-27 06:53:00,358 | INFO     | mean y: 2141955.6812227075
[2025-05-27 02:53:19] 2025-05-27 06:53:00,359 | INFO     | -- intersect: 2405539947.443277
[2025-05-27 02:53:19] 2025-05-27 06:53:00,359 | INFO     | intersect: 2405539947.443277
[2025-05-27 02:53:19] 2025-05-27 06:53:00,359 | INFO     | chi2: 0.2093153878399295
[2025-05-27 02:53:19] 2025-05-27 06:53:00,359 | INFO     | current chi2=0.2093153878399295 (change=6.28518256454384 %)
[2025-05-27 02:53:19] 2025-05-27 06:53:00,359 | INFO     | left removable region: 30
[2025-05-27 02:53:19] 2025-05-27 06:53:00,360 | INFO     | sum of square deviations: 2790229715.8269224
[2025-05-27 02:53:19] 2025-05-27 06:53:00,361 | INFO     | sum of deviations: 12595193983.134611
[2025-05-27 02:53:19] 2025-05-27 06:53:00,362 | INFO     | mean x: 1748322005.7211537
[2025-05-27 02:53:19] 2025-05-27 06:53:00,362 | INFO     | mean y: 2137271.105769231
[2025-05-27 02:53:19] 2025-05-27 06:53:00,362 | INFO     | -- intersect: -7889849070.42556
[2025-05-27 02:53:19] 2025-05-27 06:53:00,362 | INFO     | intersect: -7889849070.42556
[2025-05-27 02:53:19] 2025-05-27 06:53:00,402 | INFO     | chi2: 0.10644032359267801
[2025-05-27 02:53:19] 2025-05-27 06:53:00,402 | INFO     | -- intersect: -7889849070.42556
[2025-05-27 02:53:19] 2025-05-27 06:53:00,402 | INFO     | current memory leak: 4.51 B/s (using 208 data points, chi2=0.11)
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | ..............................
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . Timing measurements:
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . get job = 0 s
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . initial setup = 4 s
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . payload setup = 29 s
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . stage-in = 0 s
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . payload execution = 14905 s
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . stage-out = 4 s
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | . log creation = 0 s
[2025-05-27 02:53:19] 2025-05-27 06:53:00,403 | INFO     | ..............................
[2025-05-27 02:53:19] 2025-05-27 06:53:01,658 | INFO     | 
[2025-05-27 02:53:19] 2025-05-27 06:53:01,658 | INFO     | job summary report
[2025-05-27 02:53:19] 2025-05-27 06:53:01,658 | INFO     | --------------------------------------------------
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | PanDA job id: 6666242093
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | task id: 44871837
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | errors: (none)
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | pilot state: finished 
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | transexitcode: 0
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | exeerrorcode: 0
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | exeerrordiag: 
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | exitcode: 0
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | exitmsg: OK
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | cpuconsumptiontime: 53845 s
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | nevents: 400
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | neventsw: 0
[2025-05-27 02:53:19] 2025-05-27 06:53:01,659 | INFO     | pid: 4046741
[2025-05-27 02:53:19] 2025-05-27 06:53:01,660 | INFO     | pgrp: 4046741
[2025-05-27 02:53:19] 2025-05-27 06:53:01,660 | INFO     | corecount: 8
[2025-05-27 02:53:19] 2025-05-27 06:53:01,660 | INFO     | event service: False
[2025-05-27 02:53:19] 2025-05-27 06:53:01,660 | INFO     | sizes: {0: 2405063, 1: 2405234, 2: 2405290, 13: 2405290, 24: 2405552, 34: 2405580, 14939: 2436276, 14945: 2445217, 14947: 2445273, 14975: 2445443}
[2025-05-27 02:53:19] 2025-05-27 06:53:01,660 | INFO     | --------------------------------------------------
[2025-05-27 02:53:19] 2025-05-27 06:53:01,660 | INFO     | 
[2025-05-27 02:53:19] 2025-05-27 06:53:01,660 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-27 02:53:19] 2025-05-27 06:53:01,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,801 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,802 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 02:53:19] 2025-05-27 06:53:01,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 02:53:19] 2025-05-27 06:53:01,803 | INFO     | job 6666242093 has completed (purged errors)
[2025-05-27 02:53:19] 2025-05-27 06:53:01,803 | INFO     | overall cleanup function is called
[2025-05-27 02:53:19] 2025-05-27 06:53:02,378 | INFO     | PID=4035202 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-27 02:53:19] 2025-05-27 06:53:02,379 | INFO     | .. there are 30 such processes running
[2025-05-27 02:53:19] 2025-05-27 06:53:02,821 | INFO     | --- collectZombieJob: --- 10, [4046741]
[2025-05-27 02:53:19] 2025-05-27 06:53:02,821 | INFO     | zombie collector waiting for pid 4046741
[2025-05-27 02:53:19] 2025-05-27 06:53:02,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 02:53:19] 2025-05-27 06:53:02,822 | INFO     | collected zombie processes
[2025-05-27 02:53:19] 2025-05-27 06:53:02,822 | INFO     | will attempt to kill all subprocesses of pid=4046741
[2025-05-27 02:53:19] 2025-05-27 06:53:03,461 | INFO     | process IDs to be killed: [4046741] (in reverse order)
[2025-05-27 02:53:19] 2025-05-27 06:53:03,780 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 02:53:19] 2025-05-27 06:53:03,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 02:53:19] 2025-05-27 06:53:03,799 | INFO     | did not find any defunct processes belonging to 4046741
[2025-05-27 02:53:19] 2025-05-27 06:53:03,817 | INFO     | did not find any defunct processes belonging to 4046741
[2025-05-27 02:53:19] 2025-05-27 06:53:03,817 | INFO     | ready for new job
[2025-05-27 02:53:19] 2025-05-27 06:53:03,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 02:53:19] 2025-05-27 06:53:03,820 | INFO     | **************************************
[2025-05-27 02:53:19] 2025-05-27 06:53:03,820 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 02:53:19] 2025-05-27 06:53:03,820 | INFO     | **************************************
[2025-05-27 02:53:19] 2025-05-27 06:53:03,820 | INFO     | 
[2025-05-27 02:53:19] 2025-05-27 06:53:03,830 | INFO     | architecture information:
[2025-05-27 02:53:19] 2025-05-27 06:53:03,834 | INFO     | executing command: cat /etc/os-release
[2025-05-27 02:53:19] 2025-05-27 06:53:03,941 | INFO     | cat /etc/os-release:
[2025-05-27 02:53:19] NAME="CentOS Linux"
[2025-05-27 02:53:19] VERSION="7 (Core)"
[2025-05-27 02:53:19] ID="centos"
[2025-05-27 02:53:19] ID_LIKE="rhel fedora"
[2025-05-27 02:53:19] VERSION_ID="7"
[2025-05-27 02:53:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 02:53:19] ANSI_COLOR="0;31"
[2025-05-27 02:53:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 02:53:19] HOME_URL="https://www.centos.org/"
[2025-05-27 02:53:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 02:53:19] 
[2025-05-27 02:53:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 02:53:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 02:53:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 02:53:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 02:53:19] 
[2025-05-27 02:53:19] 2025-05-27 06:53:03,942 | INFO     | **************************************
[2025-05-27 02:53:19] 2025-05-27 06:53:04,446 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-27 02:53:19] 2025-05-27 06:53:04,524 | INFO     | sufficient remaining disk space (74023174144 B)
[2025-05-27 02:53:19] 2025-05-27 06:53:04,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 02:53:19] 2025-05-27 06:53:04,524 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 02:53:19] 2025-05-27 06:53:04,524 | INFO     | update_server=False
[2025-05-27 02:53:19] 2025-05-27 06:53:04,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 02:53:19] 2025-05-27 06:53:04,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 02:53:19] 2025-05-27 06:53:04,525 | INFO     | aborting loop
[2025-05-27 02:53:19] 2025-05-27 06:53:04,525 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 02:53:19] 2025-05-27 06:53:04,526 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 02:53:19] 2025-05-27 06:53:04,526 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 02:53:19] 2025-05-27 06:53:04,526 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 02:53:19] 2025-05-27 06:53:04,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 02:53:19] 2025-05-27 06:53:05,070 | INFO     | all data control threads have been joined
[2025-05-27 02:53:19] 2025-05-27 06:53:05,276 | INFO     | all payload control threads have been joined
[2025-05-27 02:53:19] 2025-05-27 06:53:05,532 | INFO     | [job] retrieve thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:05,533 | INFO     | [job] job monitor thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:05,874 | INFO     | all job control threads have been joined
[2025-05-27 02:53:19] 2025-05-27 06:53:06,014 | INFO     | [payload] failed_post thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,032 | INFO     | [payload] validate_post thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,076 | INFO     | [data] control thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,282 | INFO     | [payload] control thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,564 | INFO     | [data] copytool_in thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,638 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,639 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,645 | INFO     | [job] validate thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,648 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 02:53:19] 2025-05-27 06:53:06,880 | INFO     | [job] control thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,898 | INFO     | [data] copytool_out thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:06,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 02:53:19] 2025-05-27 06:53:07,681 | INFO     | [job] queue monitor thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:10,971 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 02:53:19] 2025-05-27 06:53:12,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742751102784)>', '<ExcThread(monitor, started 139742263899904)>']
[2025-05-27 02:53:19] 2025-05-27 06:53:13,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 02:53:19] 2025-05-27 06:53:13,587 | INFO     | [monitor] control thread has ended
[2025-05-27 02:53:19] 2025-05-27 06:53:17,825 | INFO     | all workflow threads have been joined
[2025-05-27 02:53:19] 2025-05-27 06:53:17,825 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 02:53:19] 2025-05-27 06:53:17,826 | INFO     | traces error code: 0
[2025-05-27 02:53:19] 2025-05-27 06:53:17,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 02:53:19] 2025-05-27 06:53:18,485 [wrapper] ==== pilot stdout END ====
[2025-05-27 02:53:19] 2025-05-27 06:53:18,505 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 02:53:19] 2025-05-27 06:53:18,517 [wrapper] pilotpid: 4035202
[2025-05-27 02:53:19] 2025-05-27 06:53:18,528 [wrapper] Pilot exit status: 0
[2025-05-27 02:53:19] 2025-05-27 06:53:18,570 [wrapper] pandaids: 6666242093
[2025-05-27 02:53:19] 2025-05-27 06:53:18,721 [wrapper] cleanup supervisor_pilot 1378314 4035203
[2025-05-27 02:53:19] 2025-05-27 06:53:18,744 [wrapper] Test setup, not cleaning
[2025-05-27 02:53:19] 2025-05-27 06:53:18,762 [wrapper] apfmon messages muted
[2025-05-27 02:53:19] 2025-05-27 06:53:18,778 [wrapper] ==== wrapper stdout END ====
[2025-05-27 02:53:19] 2025-05-27 06:53:18,800 [wrapper] ==== wrapper stderr END ====
[2025-05-27 02:53:19]  *** Error codes and diagnostics ***
[2025-05-27 02:53:19]     "exeErrorCode": 0,
[2025-05-27 02:53:19]     "exeErrorDiag": "",
[2025-05-27 02:53:19]     "pilotErrorCode": 0,
[2025-05-27 02:53:19]     "pilotErrorDiag": "",
[2025-05-27 02:53:19]  *** Listing of results directory ***
[2025-05-27 02:53:19] total 423048
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas    495897 May 26 17:09 pilot3.tar.gz
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas      5111 May 26 17:19 queuedata.json
[2025-05-27 02:53:19] -rwx------. 1 boincer umatlas     37140 May 26 17:19 runpilot2-wrapper.sh
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas       100 May 26 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 02:53:19] -rwxr-xr-x. 1 boincer umatlas      7986 May 26 22:41 run_atlas
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas       105 May 26 22:41 job.xml
[2025-05-27 02:53:19] -rw-r--r--. 2 boincer umatlas 225093355 May 26 22:41 EVNT.44871834._002259.pool.root.1
[2025-05-27 02:53:19] -rw-r--r--. 2 boincer umatlas     15093 May 26 22:41 start_atlas.sh
[2025-05-27 02:53:19] drwxrwx--x. 2 boincer umatlas      4096 May 26 22:41 shared
[2025-05-27 02:53:19] -rw-r--r--. 2 boincer umatlas    508875 May 26 22:41 input.tar.gz
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas         0 May 26 22:41 boinc_lockfile
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas      2559 May 26 22:41 pandaJob.out
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas    990410 May 26 22:42 agis_schedconf.cvmfs.json
[2025-05-27 02:53:19] drwx------. 4 boincer umatlas      4096 May 26 22:42 pilot3
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas      6853 May 27 02:46 init_data.xml
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas 201002617 May 27 02:51 HITS.44871837._056957.pool.root.1
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas       530 May 27 02:51 boinc_task_state.xml
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas      1050 May 27 02:52 memory_monitor_summary.json
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas   1603667 May 27 02:52 agis_ddmendpoints.agis.ALL.json
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas    401548 May 27 02:52 log.44871837._056957.job.log.tgz.1
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas        95 May 27 02:52 pilot_heartbeat.json
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas      7746 May 27 02:53 heartbeat.json
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas      8192 May 27 02:53 boinc_mmap_file
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas        28 May 27 02:53 wrapper_checkpoint.txt
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas      4476 May 27 02:53 pilotlog.txt
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas   1228924 May 27 02:53 log.44871837._056957.job.log.1
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas       357 May 27 02:53 output.list
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas       620 May 27 02:53 runtime_log
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas   1648640 May 27 02:53 result.tar.gz
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas      8665 May 27 02:53 runtime_log.err
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas       656 May 27 02:53 aHPODmSPud7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYiXKDmHw4iXn.diag
[2025-05-27 02:53:19] -rw-r--r--. 1 boincer umatlas     21034 May 27 02:53 stderr.txt
[2025-05-27 02:53:19] HITS file was successfully produced:
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas 201002617 May 27 02:51 shared/HITS.pool.root.1
[2025-05-27 02:53:19]  *** Contents of shared directory: ***
[2025-05-27 02:53:19] total 418248
[2025-05-27 02:53:19] -rw-r--r--. 2 boincer umatlas 225093355 May 26 22:41 ATLAS.root_0
[2025-05-27 02:53:19] -rw-r--r--. 2 boincer umatlas     15093 May 26 22:41 start_atlas.sh
[2025-05-27 02:53:19] -rw-r--r--. 2 boincer umatlas    508875 May 26 22:41 input.tar.gz
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas 201002617 May 27 02:51 HITS.pool.root.1
[2025-05-27 02:53:19] -rw-------. 1 boincer umatlas   1648640 May 27 02:53 result.tar.gz
02:53:41 (4025529): run_atlas exited; CPU time 54484.021538
02:53:41 (4025529): called boinc_finish(0)

</stderr_txt>
]]>

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