Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:30:55 (3581860): wrapper (7.7.26015): starting
06:30:55 (3581860): wrapper: running run_atlas (--nthreads 4)
[2025-05-30 06:30:55] Arguments: --nthreads 4
[2025-05-30 06:30:55] Threads: 4
[2025-05-30 06:30:55] Checking for CVMFS
[2025-05-30 06:30:55] No cvmfs_config command found, will try listing directly
[2025-05-30 06:30:55] CVMFS is ok
[2025-05-30 06:30:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 06:30:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 06:30:55] Further information can be found at the LHC@home message board.
[2025-05-30 06:30:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 06:30:55] Checking for apptainer binary...
[2025-05-30 06:30:55] which: no apptainer in ((null))
[2025-05-30 06:30:55] apptainer is not installed, using version from CVMFS
[2025-05-30 06:30:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 06:30:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-05-30 06:30:55] apptainer works
[2025-05-30 06:30:55] Set ATHENA_PROC_NUMBER=4
[2025-05-30 06:30:55] Set ATHENA_CORE_NUMBER=4
[2025-05-30 06:30:55] Starting ATLAS job with PandaID=6666054614
[2025-05-30 06:30:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 10:20:25]  *** The last 200 lines of the pilot log: ***
[2025-05-30 10:20:25] 2025-05-30 08:20:11,642 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6666054614/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,644 | INFO     | extracted standard info from prmon json
[2025-05-30 10:20:25] 2025-05-30 08:20:11,644 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 10:20:25] 2025-05-30 08:20:11,644 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 10:20:25] 2025-05-30 08:20:11,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 10:20:25] 2025-05-30 08:20:11,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 10:20:25] 2025-05-30 08:20:11,651 | INFO     | fitting pss+swap vs Time
[2025-05-30 10:20:25] 2025-05-30 08:20:11,652 | INFO     | sufficient remaining disk space (1665101987840 B)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,652 | INFO     | sum of square deviations: 3531973200.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,653 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,655 | INFO     | sum of deviations: -50367308929.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,655 | INFO     | mean x: 1748586323.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,655 | INFO     | mean y: 2401741.1822222224
[2025-05-30 10:20:25] 2025-05-30 08:20:11,656 | INFO     | -- intersect: 24937921500.948566
[2025-05-30 10:20:25] 2025-05-30 08:20:11,656 | INFO     | intersect: 24937921500.948566
[2025-05-30 10:20:25] 2025-05-30 08:20:11,656 | INFO     | chi2: 2.030263482423294
[2025-05-30 10:20:25] 2025-05-30 08:20:11,657 | INFO     | sum of square deviations: 3301699115.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,659 | INFO     | sum of deviations: -48607959647.50001
[2025-05-30 10:20:25] 2025-05-30 08:20:11,659 | INFO     | mean x: 1748586170.5
[2025-05-30 10:20:25] 2025-05-30 08:20:11,660 | INFO     | mean y: 2402906.8863636362
[2025-05-30 10:20:25] 2025-05-30 08:20:11,660 | INFO     | -- intersect: 25745271368.06671
[2025-05-30 10:20:25] 2025-05-30 08:20:11,660 | INFO     | intersect: 25745271368.06671
[2025-05-30 10:20:25] 2025-05-30 08:20:11,660 | INFO     | chi2: 2.025479437923049
[2025-05-30 10:20:25] 2025-05-30 08:20:11,661 | INFO     | current chi2=2.025479437923049 (change=0.2356366324697203 %)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,661 | INFO     | right removable region: 219
[2025-05-30 10:20:25] 2025-05-30 08:20:11,661 | INFO     | sum of square deviations: 3301699115.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,663 | INFO     | sum of deviations: -84838492041.5
[2025-05-30 10:20:25] 2025-05-30 08:20:11,663 | INFO     | mean x: 1748586475.5
[2025-05-30 10:20:25] 2025-05-30 08:20:11,664 | INFO     | mean y: 2424353.6227272726
[2025-05-30 10:20:25] 2025-05-30 08:20:11,664 | INFO     | -- intersect: 44933059950.19231
[2025-05-30 10:20:25] 2025-05-30 08:20:11,664 | INFO     | intersect: 44933059950.19231
[2025-05-30 10:20:25] 2025-05-30 08:20:11,664 | INFO     | chi2: 0.45178315309840356
[2025-05-30 10:20:25] 2025-05-30 08:20:11,665 | INFO     | current chi2=0.45178315309840356 (change=77.74756050090792 %)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,665 | INFO     | sum of square deviations: 3081657780.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,667 | INFO     | sum of deviations: -78614142839.99998
[2025-05-30 10:20:25] 2025-05-30 08:20:11,667 | INFO     | mean x: 1748586628.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,667 | INFO     | mean y: 2420011.827906977
[2025-05-30 10:20:25] 2025-05-30 08:20:11,668 | INFO     | -- intersect: 44609462310.244934
[2025-05-30 10:20:25] 2025-05-30 08:20:11,668 | INFO     | intersect: 44609462310.244934
[2025-05-30 10:20:25] 2025-05-30 08:20:11,668 | INFO     | chi2: 0.44389673575905625
[2025-05-30 10:20:25] 2025-05-30 08:20:11,669 | INFO     | current chi2=0.44389673575905625 (change=1.7456200580435444 %)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,669 | INFO     | left removable region: 20
[2025-05-30 10:20:25] 2025-05-30 08:20:11,669 | INFO     | sum of square deviations: 2443580700.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,671 | INFO     | sum of deviations: -56901929048.99999
[2025-05-30 10:20:25] 2025-05-30 08:20:11,671 | INFO     | mean x: 1748586750.0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,671 | INFO     | mean y: 2406987.6281407033
[2025-05-30 10:20:25] 2025-05-30 08:20:11,671 | INFO     | -- intersect: 40720505303.154
[2025-05-30 10:20:25] 2025-05-30 08:20:11,671 | INFO     | intersect: 40720505303.154
[2025-05-30 10:20:25] 2025-05-30 08:20:11,672 | INFO     | chi2: 0.4011866388575411
[2025-05-30 10:20:25] 2025-05-30 08:20:11,672 | INFO     | -- intersect: 40720505303.154
[2025-05-30 10:20:25] 2025-05-30 08:20:11,672 | INFO     | current memory leak: -23.29 B/s (using 199 data points, chi2=0.40)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,673 | INFO     | ..............................
[2025-05-30 10:20:25] 2025-05-30 08:20:11,674 | INFO     | . Timing measurements:
[2025-05-30 10:20:25] 2025-05-30 08:20:11,674 | INFO     | . get job = 0 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,674 | INFO     | . initial setup = 1 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,674 | INFO     | . payload setup = 6 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,674 | INFO     | . stage-in = 0 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,674 | INFO     | . payload execution = 13711 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,675 | INFO     | . stage-out = 1 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,675 | INFO     | . log creation = 0 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,675 | INFO     | ..............................
[2025-05-30 10:20:25] 2025-05-30 08:20:11,692 | INFO     | size of work directory /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6666054614: 2956228 B (within 2537553920 B limit)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,708 | INFO     | pfn file=/scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6666054614/HITS.44871837._054139.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,718 | INFO     | total size of present files: 0 B (workdir size: 2956228 B)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,728 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6666054614/HITS.44871837._054139.pool.root.1 since it does not exist
[2025-05-30 10:20:25] 2025-05-30 08:20:11,800 | INFO     | 
[2025-05-30 10:20:25] 2025-05-30 08:20:11,800 | INFO     | job summary report
[2025-05-30 10:20:25] 2025-05-30 08:20:11,800 | INFO     | --------------------------------------------------
[2025-05-30 10:20:25] 2025-05-30 08:20:11,801 | INFO     | PanDA job id: 6666054614
[2025-05-30 10:20:25] 2025-05-30 08:20:11,801 | INFO     | task id: 44871837
[2025-05-30 10:20:25] 2025-05-30 08:20:11,801 | INFO     | errors: (none)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 10:20:25] 2025-05-30 08:20:11,801 | INFO     | pilot state: finished 
[2025-05-30 10:20:25] 2025-05-30 08:20:11,801 | INFO     | transexitcode: 0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,801 | INFO     | exeerrorcode: 0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | exeerrordiag: 
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | exitcode: 0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | exitmsg: OK
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | cpuconsumptiontime: 52764 s
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | nevents: 400
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | neventsw: 0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | pid: 3592753
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | pgrp: 3592753
[2025-05-30 10:20:25] 2025-05-30 08:20:11,802 | INFO     | corecount: 4
[2025-05-30 10:20:25] 2025-05-30 08:20:11,803 | INFO     | event service: False
[2025-05-30 10:20:25] 2025-05-30 08:20:11,803 | INFO     | sizes: {0: 2405131, 1: 2405273, 5: 2405479, 11: 2405535, 13722: 2435474, 13724: 2444437, 13725: 2444621, 13732: 2444819}
[2025-05-30 10:20:25] 2025-05-30 08:20:11,803 | INFO     | --------------------------------------------------
[2025-05-30 10:20:25] 2025-05-30 08:20:11,803 | INFO     | 
[2025-05-30 10:20:25] 2025-05-30 08:20:11,803 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-05-30 10:20:25] 2025-05-30 08:20:11,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 10:20:25] 2025-05-30 08:20:11,823 | INFO     | job 6666054614 has completed (purged errors)
[2025-05-30 10:20:25] 2025-05-30 08:20:11,823 | INFO     | overall cleanup function is called
[2025-05-30 10:20:25] 2025-05-30 08:20:12,126 | INFO     | number of running child processes to parent process 3592753: 1
[2025-05-30 10:20:25] 2025-05-30 08:20:12,126 | INFO     | maximum number of monitored processes: 6
[2025-05-30 10:20:25] 2025-05-30 08:20:12,126 | INFO     | aborting job monitoring since job object (job id=6666054614) has expired
[2025-05-30 10:20:25] 2025-05-30 08:20:12,830 | INFO     | --- collectZombieJob: --- 10, [3592753]
[2025-05-30 10:20:25] 2025-05-30 08:20:12,831 | INFO     | zombie collector waiting for pid 3592753
[2025-05-30 10:20:25] 2025-05-30 08:20:12,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 10:20:25] 2025-05-30 08:20:12,832 | INFO     | collected zombie processes
[2025-05-30 10:20:25] 2025-05-30 08:20:12,832 | INFO     | will attempt to kill all subprocesses of pid=3592753
[2025-05-30 10:20:25] 2025-05-30 08:20:13,123 | INFO     | process IDs to be killed: [3592753] (in reverse order)
[2025-05-30 10:20:25] 2025-05-30 08:20:13,198 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 10:20:25] 2025-05-30 08:20:13,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 10:20:25] 2025-05-30 08:20:13,205 | INFO     | did not find any defunct processes belonging to 3592753
[2025-05-30 10:20:25] 2025-05-30 08:20:13,211 | INFO     | did not find any defunct processes belonging to 3592753
[2025-05-30 10:20:25] 2025-05-30 08:20:13,212 | INFO     | ready for new job
[2025-05-30 10:20:25] 2025-05-30 08:20:13,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 10:20:25] 2025-05-30 08:20:13,214 | INFO     | **************************************
[2025-05-30 10:20:25] 2025-05-30 08:20:13,214 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 10:20:25] 2025-05-30 08:20:13,214 | INFO     | **************************************
[2025-05-30 10:20:25] 2025-05-30 08:20:13,214 | INFO     | 
[2025-05-30 10:20:25] 2025-05-30 08:20:13,217 | INFO     | architecture information:
[2025-05-30 10:20:25] 2025-05-30 08:20:13,217 | INFO     | executing command: cat /etc/os-release
[2025-05-30 10:20:25] 2025-05-30 08:20:13,229 | INFO     | cat /etc/os-release:
[2025-05-30 10:20:25] NAME="CentOS Linux"
[2025-05-30 10:20:25] VERSION="7 (Core)"
[2025-05-30 10:20:25] ID="centos"
[2025-05-30 10:20:25] ID_LIKE="rhel fedora"
[2025-05-30 10:20:25] VERSION_ID="7"
[2025-05-30 10:20:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 10:20:25] ANSI_COLOR="0;31"
[2025-05-30 10:20:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 10:20:25] HOME_URL="https://www.centos.org/"
[2025-05-30 10:20:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 10:20:25] 
[2025-05-30 10:20:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 10:20:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 10:20:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 10:20:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 10:20:25] 
[2025-05-30 10:20:25] 2025-05-30 08:20:13,230 | INFO     | **************************************
[2025-05-30 10:20:25] 2025-05-30 08:20:13,733 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-05-30 10:20:25] 2025-05-30 08:20:13,748 | INFO     | sufficient remaining disk space (1665106182144 B)
[2025-05-30 10:20:25] 2025-05-30 08:20:13,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 10:20:25] 2025-05-30 08:20:13,748 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 10:20:25] 2025-05-30 08:20:13,749 | INFO     | update_server=False
[2025-05-30 10:20:25] 2025-05-30 08:20:13,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 10:20:25] 2025-05-30 08:20:13,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 10:20:25] 2025-05-30 08:20:13,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 10:20:25] 2025-05-30 08:20:13,750 | INFO     | aborting loop
[2025-05-30 10:20:25] 2025-05-30 08:20:14,299 | INFO     | all job control threads have been joined
[2025-05-30 10:20:25] 2025-05-30 08:20:14,409 | INFO     | all payload control threads have been joined
[2025-05-30 10:20:25] 2025-05-30 08:20:14,468 | INFO     | all data control threads have been joined
[2025-05-30 10:20:25] 2025-05-30 08:20:14,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 10:20:25] 2025-05-30 08:20:14,558 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 10:20:25] 2025-05-30 08:20:14,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 10:20:25] 2025-05-30 08:20:14,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 10:20:25] 2025-05-30 08:20:14,754 | INFO     | [job] retrieve thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:14,755 | INFO     | [job] job monitor thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:14,755 | INFO     | [job] queue monitor thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:14,833 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,264 | INFO     | [data] copytool_in thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,305 | INFO     | [job] control thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,414 | INFO     | [payload] control thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,473 | INFO     | [data] control thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,526 | INFO     | [job] validate thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,710 | INFO     | [payload] validate_post thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,814 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:15,943 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:16,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 10:20:25] 2025-05-30 08:20:16,313 | INFO     | [payload] failed_post thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:16,516 | INFO     | [data] copytool_out thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:20,052 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 10:20:25] 2025-05-30 08:20:20,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23344835569472)>', '<ExcThread(monitor, started 23344596350720)>']
[2025-05-30 10:20:25] 2025-05-30 08:20:20,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 10:20:25] 2025-05-30 08:20:20,586 | INFO     | [monitor] control thread has ended
[2025-05-30 10:20:25] 2025-05-30 08:20:25,408 | INFO     | all workflow threads have been joined
[2025-05-30 10:20:25] 2025-05-30 08:20:25,408 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 10:20:25] 2025-05-30 08:20:25,409 | INFO     | traces error code: 0
[2025-05-30 10:20:25] 2025-05-30 08:20:25,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 10:20:25] 2025-05-30 08:20:25,516 [wrapper] ==== pilot stdout END ====
[2025-05-30 10:20:25] 2025-05-30 08:20:25,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 10:20:25] 2025-05-30 08:20:25,521 [wrapper] pilotpid: 3585506
[2025-05-30 10:20:25] 2025-05-30 08:20:25,524 [wrapper] Pilot exit status: 0
[2025-05-30 10:20:25] 2025-05-30 08:20:25,533 [wrapper] pandaids: 6666054614
[2025-05-30 10:20:25] 2025-05-30 08:20:25,576 [wrapper] cleanup supervisor_pilot 3860369 3585507
[2025-05-30 10:20:25] 2025-05-30 08:20:25,579 [wrapper] Test setup, not cleaning
[2025-05-30 10:20:25] 2025-05-30 08:20:25,581 [wrapper] apfmon messages muted
[2025-05-30 10:20:25] 2025-05-30 08:20:25,584 [wrapper] ==== wrapper stdout END ====
[2025-05-30 10:20:25] 2025-05-30 08:20:25,586 [wrapper] ==== wrapper stderr END ====
[2025-05-30 10:20:25]  *** Error codes and diagnostics ***
[2025-05-30 10:20:25]     "exeErrorCode": 0,
[2025-05-30 10:20:25]     "exeErrorDiag": "",
[2025-05-30 10:20:25]     "pilotErrorCode": 0,
[2025-05-30 10:20:25]     "pilotErrorDiag": "",
[2025-05-30 10:20:25]  *** Listing of results directory ***
[2025-05-30 10:20:25] total 420464
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc    495897 May 26 18:14 pilot3.tar.gz
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc      5111 May 26 18:48 queuedata.json
[2025-05-30 10:20:25] -rwx------ 1 boinc boinc     37140 May 26 18:50 runpilot2-wrapper.sh
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc       100 May 30 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 10:20:25] -rwxr-xr-x 1 boinc boinc      7986 May 30 06:30 run_atlas
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc       105 May 30 06:30 job.xml
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc      6423 May 30 06:30 init_data.xml
[2025-05-30 10:20:25] -rw-r--r-- 2 boinc boinc 225286901 May 30 06:30 EVNT.44871834._002151.pool.root.1
[2025-05-30 10:20:25] -rw-r--r-- 2 boinc boinc     15093 May 30 06:30 start_atlas.sh
[2025-05-30 10:20:25] drwxrwx--x 2 boinc boinc      4096 May 30 06:30 shared
[2025-05-30 10:20:25] -rw-r--r-- 2 boinc boinc    508884 May 30 06:30 input.tar.gz
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc         0 May 30 06:30 boinc_lockfile
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc      2559 May 30 06:30 pandaJob.out
[2025-05-30 10:20:25] -rw------- 1 boinc boinc    992366 May 30 06:31 agis_schedconf.cvmfs.json
[2025-05-30 10:20:25] drwx------ 4 boinc boinc      4096 May 30 06:31 pilot3
[2025-05-30 10:20:25] -rw------- 1 boinc boinc 198191648 May 30 10:19 HITS.44871837._054139.pool.root.1
[2025-05-30 10:20:25] -rw------- 1 boinc boinc        95 May 30 10:19 pilot_heartbeat.json
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc       530 May 30 10:19 boinc_task_state.xml
[2025-05-30 10:20:25] -rw------- 1 boinc boinc      1031 May 30 10:19 memory_monitor_summary.json
[2025-05-30 10:20:25] -rw------- 1 boinc boinc   1603667 May 30 10:20 agis_ddmendpoints.agis.ALL.json
[2025-05-30 10:20:25] -rw------- 1 boinc boinc    338957 May 30 10:20 log.44871837._054139.job.log.tgz.1
[2025-05-30 10:20:25] -rw------- 1 boinc boinc      7728 May 30 10:20 heartbeat.json
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc        28 May 30 10:20 wrapper_checkpoint.txt
[2025-05-30 10:20:25] -rw------- 1 boinc boinc      4364 May 30 10:20 pilotlog.txt
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc      8192 May 30 10:20 boinc_mmap_file
[2025-05-30 10:20:25] -rw------- 1 boinc boinc   1279050 May 30 10:20 log.44871837._054139.job.log.1
[2025-05-30 10:20:25] -rw------- 1 boinc boinc       357 May 30 10:20 output.list
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc       620 May 30 10:20 runtime_log
[2025-05-30 10:20:25] -rw------- 1 boinc boinc   1638400 May 30 10:20 result.tar.gz
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc      9026 May 30 10:20 runtime_log.err
[2025-05-30 10:20:25] -rw------- 1 boinc boinc       665 May 30 10:20 QgHNDmoCqd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6TQKDmBGzUTn.diag
[2025-05-30 10:20:25] -rw-r--r-- 1 boinc boinc     21097 May 30 10:20 stderr.txt
[2025-05-30 10:20:25] HITS file was successfully produced:
[2025-05-30 10:20:25] -rw------- 1 boinc boinc 198191648 May 30 10:19 shared/HITS.pool.root.1
[2025-05-30 10:20:25]  *** Contents of shared directory: ***
[2025-05-30 10:20:25] total 415676
[2025-05-30 10:20:25] -rw-r--r-- 2 boinc boinc 225286901 May 30 06:30 ATLAS.root_0
[2025-05-30 10:20:25] -rw-r--r-- 2 boinc boinc     15093 May 30 06:30 start_atlas.sh
[2025-05-30 10:20:25] -rw-r--r-- 2 boinc boinc    508884 May 30 06:30 input.tar.gz
[2025-05-30 10:20:25] -rw------- 1 boinc boinc 198191648 May 30 10:19 HITS.pool.root.1
[2025-05-30 10:20:25] -rw------- 1 boinc boinc   1638400 May 30 10:20 result.tar.gz
10:20:27 (3581860): run_atlas exited; CPU time 53282.747829
10:20:27 (3581860): called boinc_finish(0)

</stderr_txt>
]]>

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