Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:55:09 (548032): wrapper (7.7.26015): starting
10:55:09 (548032): wrapper: running run_atlas (--nthreads 6)
[2025-05-27 10:55:09] Arguments: --nthreads 6
[2025-05-27 10:55:09] Threads: 6
[2025-05-27 10:55:09] Checking for CVMFS
[2025-05-27 10:55:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 10:55:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 10:55:09] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 10:55:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 10:55:10] 2.11.5.0 1578993 3873 80548 146463 3 187 43285217 52428801 1858 130560 0 8739633 99.997 920205 79 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-27 10:55:10] CVMFS is ok
[2025-05-27 10:55:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 10:55:10] Checking for apptainer binary...
[2025-05-27 10:55:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 10:55:10] Running /usr/bin/apptainer --version
[2025-05-27 10:55:10] apptainer version 1.3.5-1.el9
[2025-05-27 10:55:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 10:55:10] testio008
[2025-05-27 10:55:10] apptainer works
[2025-05-27 10:55:10] Set ATHENA_PROC_NUMBER=6
[2025-05-27 10:55:10] Set ATHENA_CORE_NUMBER=6
[2025-05-27 10:55:10] Starting ATLAS job with PandaID=6665731849
[2025-05-27 10:55:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 12:25:55]  *** The last 200 lines of the pilot log: ***
[2025-05-27 12:25:55]  filetype=log
[2025-05-27 12:25:55]  guid=6b3b2f3c-7037-4ec4-af27-f2d3a11563b6
[2025-05-27 12:25:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-27 12:25:55]  is_altstaged=None
[2025-05-27 12:25:55]  is_tar=False
[2025-05-27 12:25:55]  lfn=log.44871837._036089.job.log.tgz.1
[2025-05-27 12:25:55]  mtime=0
[2025-05-27 12:25:55]  protocol_id=None
[2025-05-27 12:25:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-27 12:25:55]  replicas=None
[2025-05-27 12:25:55]  scope=mc23_13p6TeV
[2025-05-27 12:25:55]  status=None
[2025-05-27 12:25:55]  status_code=0
[2025-05-27 12:25:55]  storage_token=
[2025-05-27 12:25:55]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6665731849/log.44871837._036089.job.log.tgz.1
[2025-05-27 12:25:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/70/log.44871837._036089.job.log.tgz.1
[2025-05-27 12:25:55]  workdir=None
[2025-05-27 12:25:55] ]
[2025-05-27 12:25:55] 2025-05-27 03:25:34,491 | INFO     | transferring file log.44871837._036089.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6665731849/log.44871837._036089.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-27 12:25:55] 2025-05-27 03:25:34,491 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6665731849/log.44871837._036089.job.log.tgz.1 /var/lib/boinc/slots/4/log.44871837._036089.job
[2025-05-27 12:25:55] 2025-05-27 03:25:34,498 | INFO     | adding to output.list: log.44871837._036089.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/70/log.44871837._036089.job.log.tg
[2025-05-27 12:25:55] 2025-05-27 03:25:34,498 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-27 12:25:55] 2025-05-27 03:25:34,499 | INFO     | summary of transferred files:
[2025-05-27 12:25:55] 2025-05-27 03:25:34,499 | INFO     |  -- lfn=log.44871837._036089.job.log.tgz.1, status_code=0, status=transferred
[2025-05-27 12:25:55] 2025-05-27 03:25:34,499 | INFO     | stage-out finished correctly
[2025-05-27 12:25:55] 2025-05-27 03:25:34,558 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-27 12:25:55] 2025-05-27 03:25:35,128 | INFO     | job 6665731849 has state=finished
[2025-05-27 12:25:55] 2025-05-27 03:25:35,128 | INFO     | preparing for final server update for job 6665731849 in state='finished'
[2025-05-27 12:25:55] 2025-05-27 03:25:35,129 | INFO     | this job has now completed (state=finished)
[2025-05-27 12:25:55] 2025-05-27 03:25:35,129 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-27 12:25:55] 2025-05-27 03:25:35,129 | INFO     | log transfer has been attempted: DONE
[2025-05-27 12:25:55] 2025-05-27 03:25:35,129 | INFO     | job 6665731849 has finished - writing final server update
[2025-05-27 12:25:55] 2025-05-27 03:25:35,129 | INFO     | total number of processed events: 400 (read)
[2025-05-27 12:25:55] 2025-05-27 03:25:35,130 | INFO     | executing command: lscpu
[2025-05-27 12:25:55] 2025-05-27 03:25:35,141 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-27 12:25:55] 2025-05-27 03:25:36,111 | INFO     | monitor loop #382: job 0:6665731849 is in state 'finished'
[2025-05-27 12:25:55] 2025-05-27 03:25:36,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 12:25:55] 2025-05-27 03:25:36,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-27 12:25:55] 2025-05-27 03:25:36,590 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6665731849/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 12:25:55] 2025-05-27 03:25:36,590 | INFO     | extracted standard info from prmon json
[2025-05-27 12:25:55] 2025-05-27 03:25:36,590 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 12:25:55] 2025-05-27 03:25:36,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 12:25:55] 2025-05-27 03:25:36,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 12:25:55] 2025-05-27 03:25:36,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 12:25:55] 2025-05-27 03:25:36,591 | INFO     | fitting pss+swap vs Time
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | sum of square deviations: 155125706.86075953
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | sum of deviations: 15537976196.25316
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | mean x: 1748313623.835443
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | mean y: 2357625.481012658
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | -- intersect: -175115332539.97742
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | intersect: -175115332539.97742
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | chi2: 1.2040566565665665
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | -- intersect: -175115332539.97742
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | current memory leak: 100.16 B/s (using 79 data points, chi2=1.20)
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | ..............................
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | . Timing measurements:
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | . get job = 0 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | . initial setup = 4 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | . payload setup = 2 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | . stage-in = 0 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,592 | INFO     | . payload execution = 5397 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,593 | INFO     | . stage-out = 0 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,593 | INFO     | . log creation = 0 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,593 | INFO     | ..............................
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | 
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | job summary report
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | --------------------------------------------------
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | PanDA job id: 6665731849
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | task id: 44871837
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | errors: (none)
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | pilot state: finished 
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | transexitcode: 0
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | exeerrorcode: 0
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | exeerrordiag: 
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | exitcode: 0
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | exitmsg: OK
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | cpuconsumptiontime: 26349 s
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | nevents: 400
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | neventsw: 0
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | pid: 558272
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | pgrp: 558272
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | corecount: 6
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | event service: False
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | sizes: {0: 2405234, 1: 2405234, 2: 2405468, 11: 2405496, 5403: 2431786, 5404: 2440911, 5406: 2441025}
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | --------------------------------------------------
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | 
[2025-05-27 12:25:55] 2025-05-27 03:25:36,637 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 12:25:55] 2025-05-27 03:25:36,646 | INFO     | job 6665731849 has completed (purged errors)
[2025-05-27 12:25:55] 2025-05-27 03:25:36,646 | INFO     | overall cleanup function is called
[2025-05-27 12:25:55] 2025-05-27 03:25:37,651 | INFO     | --- collectZombieJob: --- 10, [558272]
[2025-05-27 12:25:55] 2025-05-27 03:25:37,652 | INFO     | zombie collector waiting for pid 558272
[2025-05-27 12:25:55] 2025-05-27 03:25:37,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 12:25:55] 2025-05-27 03:25:37,652 | INFO     | collected zombie processes
[2025-05-27 12:25:55] 2025-05-27 03:25:37,652 | INFO     | will attempt to kill all subprocesses of pid=558272
[2025-05-27 12:25:55] 2025-05-27 03:25:37,682 | INFO     | process IDs to be killed: [558272] (in reverse order)
[2025-05-27 12:25:55] 2025-05-27 03:25:37,704 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 12:25:55] 2025-05-27 03:25:37,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 12:25:55] 2025-05-27 03:25:37,706 | INFO     | did not find any defunct processes belonging to 558272
[2025-05-27 12:25:55] 2025-05-27 03:25:37,708 | INFO     | did not find any defunct processes belonging to 558272
[2025-05-27 12:25:55] 2025-05-27 03:25:37,708 | INFO     | ready for new job
[2025-05-27 12:25:55] 2025-05-27 03:25:37,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 12:25:55] 2025-05-27 03:25:37,709 | INFO     | **************************************
[2025-05-27 12:25:55] 2025-05-27 03:25:37,709 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 12:25:55] 2025-05-27 03:25:37,709 | INFO     | **************************************
[2025-05-27 12:25:55] 2025-05-27 03:25:37,709 | INFO     | 
[2025-05-27 12:25:55] 2025-05-27 03:25:37,709 | INFO     | architecture information:
[2025-05-27 12:25:55] 2025-05-27 03:25:37,710 | INFO     | executing command: cat /etc/os-release
[2025-05-27 12:25:55] 2025-05-27 03:25:37,718 | INFO     | cat /etc/os-release:
[2025-05-27 12:25:55] NAME="CentOS Linux"
[2025-05-27 12:25:55] VERSION="7 (Core)"
[2025-05-27 12:25:55] ID="centos"
[2025-05-27 12:25:55] ID_LIKE="rhel fedora"
[2025-05-27 12:25:55] VERSION_ID="7"
[2025-05-27 12:25:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 12:25:55] ANSI_COLOR="0;31"
[2025-05-27 12:25:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 12:25:55] HOME_URL="https://www.centos.org/"
[2025-05-27 12:25:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 12:25:55] 
[2025-05-27 12:25:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 12:25:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 12:25:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 12:25:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 12:25:55] 
[2025-05-27 12:25:55] 2025-05-27 03:25:37,718 | INFO     | **************************************
[2025-05-27 12:25:55] 2025-05-27 03:25:38,221 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | INFO     | sufficient remaining disk space (281987252224 B)
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | INFO     | update_server=False
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 12:25:55] 2025-05-27 03:25:38,228 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 12:25:55] 2025-05-27 03:25:38,229 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 12:25:55] 2025-05-27 03:25:38,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 12:25:55] 2025-05-27 03:25:38,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 12:25:55] 2025-05-27 03:25:38,614 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-27 12:25:55] 2025-05-27 03:25:38,614 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-27 12:25:55] 2025-05-27 03:25:38,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 12:25:55] 2025-05-27 03:25:38,614 | INFO     | will abort loop
[2025-05-27 12:25:55] 2025-05-27 03:25:38,712 | INFO     | all data control threads have been joined
[2025-05-27 12:25:55] 2025-05-27 03:25:39,232 | INFO     | [job] queue monitor thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:39,233 | INFO     | [job] retrieve thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:39,582 | INFO     | all payload control threads have been joined
[2025-05-27 12:25:55] 2025-05-27 03:25:39,619 | INFO     | [job] job monitor thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:39,717 | INFO     | [data] control thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:39,724 | INFO     | all job control threads have been joined
[2025-05-27 12:25:55] 2025-05-27 03:25:39,924 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,160 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,169 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,173 | INFO     | [job] validate thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,233 | INFO     | [data] copytool_out thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,407 | INFO     | [payload] validate_post thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,531 | INFO     | [payload] failed_post thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,587 | INFO     | [payload] control thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 12:25:55] 2025-05-27 03:25:40,686 | INFO     | [data] copytool_in thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:40,729 | INFO     | [job] control thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:44,612 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:48,627 | INFO     | job.realtimelogging is not enabled
[2025-05-27 12:25:55] 2025-05-27 03:25:49,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 12:25:55] 2025-05-27 03:25:50,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838056994624)>', '<ExcThread(monitor, started 139837281658624)>']
[2025-05-27 12:25:55] 2025-05-27 03:25:50,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 12:25:55] 2025-05-27 03:25:50,286 | INFO     | [monitor] control thread has ended
[2025-05-27 12:25:55] 2025-05-27 03:25:55,108 | INFO     | all workflow threads have been joined
[2025-05-27 12:25:55] 2025-05-27 03:25:55,108 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 12:25:55] 2025-05-27 03:25:55,108 | INFO     | traces error code: 0
[2025-05-27 12:25:55] 2025-05-27 03:25:55,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 12:25:55] 2025-05-27 03:25:55,162 [wrapper] ==== pilot stdout END ====
[2025-05-27 12:25:55] 2025-05-27 03:25:55,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 12:25:55] 2025-05-27 03:25:55,163 [wrapper] pilotpid: 551726
[2025-05-27 12:25:55] 2025-05-27 03:25:55,164 [wrapper] Pilot exit status: 0
[2025-05-27 12:25:55] 2025-05-27 03:25:55,168 [wrapper] pandaids: 6665731849
[2025-05-27 12:25:55] 2025-05-27 03:25:55,179 [wrapper] cleanup supervisor_pilot  619673 551727
[2025-05-27 12:25:55] 2025-05-27 03:25:55,180 [wrapper] Test setup, not cleaning
[2025-05-27 12:25:55] 2025-05-27 03:25:55,181 [wrapper] apfmon messages muted
[2025-05-27 12:25:55] 2025-05-27 03:25:55,181 [wrapper] ==== wrapper stdout END ====
[2025-05-27 12:25:55] 2025-05-27 03:25:55,182 [wrapper] ==== wrapper stderr END ====
[2025-05-27 12:25:55]  *** Error codes and diagnostics ***
[2025-05-27 12:25:55]     "exeErrorCode": 0,
[2025-05-27 12:25:55]     "exeErrorDiag": "",
[2025-05-27 12:25:55]     "pilotErrorCode": 0,
[2025-05-27 12:25:55]     "pilotErrorDiag": "",
[2025-05-27 12:25:55]  *** Listing of results directory ***
[2025-05-27 12:25:55] total 422840
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc    495897 May 25 23:32 pilot3.tar.gz
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc      5111 May 25 23:33 queuedata.json
[2025-05-27 12:25:55] -rwx------. 1 boinc boinc     37140 May 25 23:35 runpilot2-wrapper.sh
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc       100 May 27 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 12:25:55] -rwxr-xr-x. 1 boinc boinc      7986 May 27 10:55 run_atlas
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc       105 May 27 10:55 job.xml
[2025-05-27 12:25:55] -rw-r--r--. 2 boinc boinc 227068047 May 27 10:55 EVNT.44871834._001439.pool.root.1
[2025-05-27 12:25:55] -rw-r--r--. 2 boinc boinc     15093 May 27 10:55 start_atlas.sh
[2025-05-27 12:25:55] drwxrwx--x. 2 boinc boinc        68 May 27 10:55 shared
[2025-05-27 12:25:55] -rw-r--r--. 2 boinc boinc    508879 May 27 10:55 input.tar.gz
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc      9509 May 27 10:55 init_data.xml
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc         0 May 27 10:55 boinc_lockfile
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc      2559 May 27 10:55 pandaJob.out
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc    990410 May 27 10:55 agis_schedconf.cvmfs.json
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc   1603667 May 27 10:55 agis_ddmendpoints.agis.ALL.json
[2025-05-27 12:25:55] drwx------. 4 boinc boinc      4096 May 27 10:55 pilot3
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc 200508403 May 27 12:25 HITS.44871837._036089.pool.root.1
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc      1017 May 27 12:25 memory_monitor_summary.json
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc      8192 May 27 12:25 boinc_mmap_file
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc        27 May 27 12:25 wrapper_checkpoint.txt
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc       529 May 27 12:25 boinc_task_state.xml
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc    286079 May 27 12:25 log.44871837._036089.job.log.tgz.1
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc        96 May 27 12:25 pilot_heartbeat.json
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc      7666 May 27 12:25 heartbeat.json
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc      4735 May 27 12:25 pilotlog.txt
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc    501952 May 27 12:25 log.44871837._036089.job.log.1
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc       357 May 27 12:25 output.list
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc       620 May 27 12:25 runtime_log
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc    808960 May 27 12:25 result.tar.gz
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc      8617 May 27 12:25 runtime_log.err
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc       642 May 27 12:25 ijJODmmcRd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3PUKDmVV3Rtm.diag
[2025-05-27 12:25:55] -rw-r--r--. 1 boinc boinc     20863 May 27 12:25 stderr.txt
[2025-05-27 12:25:55] HITS file was successfully produced:
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc 200508403 May 27 12:25 shared/HITS.pool.root.1
[2025-05-27 12:25:55]  *** Contents of shared directory: ***
[2025-05-27 12:25:55] total 418868
[2025-05-27 12:25:55] -rw-r--r--. 2 boinc boinc 227068047 May 27 10:55 ATLAS.root_0
[2025-05-27 12:25:55] -rw-r--r--. 2 boinc boinc     15093 May 27 10:55 start_atlas.sh
[2025-05-27 12:25:55] -rw-r--r--. 2 boinc boinc    508879 May 27 10:55 input.tar.gz
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc 200508403 May 27 12:25 HITS.pool.root.1
[2025-05-27 12:25:55] -rw-------. 1 boinc boinc    808960 May 27 12:25 result.tar.gz
12:25:56 (548032): run_atlas exited; CPU time 26379.368241
12:25:56 (548032): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN