Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:47:28 (28575): wrapper (7.7.26015): starting
12:47:28 (28575): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 12:47:28] Arguments: --nthreads 8
[2025-05-27 12:47:28] Threads: 8
[2025-05-27 12:47:28] Checking for CVMFS
[2025-05-27 12:47:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 12:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 12:47:30] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 12:47:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 12:47:31] 2.11.2.0 1855 21594 96944 146477 3 16 19554038 25165825 4628 130560 0 12306288 99.792 13764182 1765 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 12:47:31] CVMFS is ok
[2025-05-27 12:47:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 12:47:31] Checking for apptainer binary...
[2025-05-27 12:47:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 12:47:31] Running /usr/bin/apptainer --version
[2025-05-27 12:47:31] apptainer version 1.3.2-1.el7
[2025-05-27 12:47:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 13:34:03] cg-vwn348.simple-grid.lan
[2025-05-27 13:34:03] apptainer works
[2025-05-27 13:34:03] Set ATHENA_PROC_NUMBER=8
[2025-05-27 13:34:03] Set ATHENA_CORE_NUMBER=8
[2025-05-27 13:34:03] Starting ATLAS job with PandaID=6666011639
[2025-05-27 13:34:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 23:10:19]  *** The last 200 lines of the pilot log: ***
[2025-05-27 23:10:19] 2025-05-27 16:20:48,187 | INFO     | using path: /var/lib/boinc/slots/28/PanDA_Pilot-6666011639/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,188 | INFO     | extracted standard info from prmon json
[2025-05-27 23:10:19] 2025-05-27 16:20:48,188 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 23:10:19] 2025-05-27 16:20:48,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 23:10:19] 2025-05-27 16:20:48,189 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 23:10:19] 2025-05-27 16:20:48,189 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 23:10:19] 2025-05-27 16:20:48,194 | INFO     | fitting pss+swap vs Time
[2025-05-27 23:10:19] 2025-05-27 16:20:48,195 | INFO     | sum of square deviations: 6734191380.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,198 | INFO     | sum of deviations: -30569944979.000008
[2025-05-27 23:10:19] 2025-05-27 16:20:48,198 | INFO     | mean x: 1748354207.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,198 | INFO     | mean y: 2504571.1541218637
[2025-05-27 23:10:19] 2025-05-27 16:20:48,198 | INFO     | -- intersect: 7939180096.96806
[2025-05-27 23:10:19] 2025-05-27 16:20:48,198 | INFO     | intersect: 7939180096.96806
[2025-05-27 23:10:19] 2025-05-27 16:20:48,199 | INFO     | chi2: 2.511805898426181
[2025-05-27 23:10:19] 2025-05-27 16:20:48,199 | INFO     | sum of square deviations: 6378584712.5
[2025-05-27 23:10:19] 2025-05-27 16:20:48,202 | INFO     | sum of deviations: -10697850173.000004
[2025-05-27 23:10:19] 2025-05-27 16:20:48,202 | INFO     | mean x: 1748354054.5
[2025-05-27 23:10:19] 2025-05-27 16:20:48,202 | INFO     | mean y: 2512974.4671532847
[2025-05-27 23:10:19] 2025-05-27 16:20:48,202 | INFO     | -- intersect: 2934766846.9829335
[2025-05-27 23:10:19] 2025-05-27 16:20:48,202 | INFO     | intersect: 2934766846.9829335
[2025-05-27 23:10:19] 2025-05-27 16:20:48,203 | INFO     | chi2: 1.6929208056499594
[2025-05-27 23:10:19] 2025-05-27 16:20:48,203 | INFO     | current chi2=1.6929208056499594 (change=32.6014479577944 %)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,203 | INFO     | sum of square deviations: 6035722470.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,205 | INFO     | sum of deviations: -10327641782.999994
[2025-05-27 23:10:19] 2025-05-27 16:20:48,206 | INFO     | mean x: 1748353902.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,206 | INFO     | mean y: 2513139.1970260222
[2025-05-27 23:10:19] 2025-05-27 16:20:48,206 | INFO     | -- intersect: 2994097477.1969604
[2025-05-27 23:10:19] 2025-05-27 16:20:48,206 | INFO     | intersect: 2994097477.1969604
[2025-05-27 23:10:19] 2025-05-27 16:20:48,206 | INFO     | chi2: 1.6926620680733278
[2025-05-27 23:10:19] 2025-05-27 16:20:48,207 | INFO     | current chi2=1.6926620680733278 (change=0.015283501494466167 %)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,207 | INFO     | right removable region: 268
[2025-05-27 23:10:19] 2025-05-27 16:20:48,207 | INFO     | sum of square deviations: 6378584712.5
[2025-05-27 23:10:19] 2025-05-27 16:20:48,215 | INFO     | sum of deviations: -73800207761.5
[2025-05-27 23:10:19] 2025-05-27 16:20:48,215 | INFO     | mean x: 1748354359.5
[2025-05-27 23:10:19] 2025-05-27 16:20:48,215 | INFO     | mean y: 2522962.105839416
[2025-05-27 23:10:19] 2025-05-27 16:20:48,215 | INFO     | -- intersect: 20230978142.605137
[2025-05-27 23:10:19] 2025-05-27 16:20:48,215 | INFO     | intersect: 20230978142.605137
[2025-05-27 23:10:19] 2025-05-27 16:20:48,216 | INFO     | chi2: 1.039226789058523
[2025-05-27 23:10:19] 2025-05-27 16:20:48,216 | INFO     | current chi2=1.039226789058523 (change=58.62630987093112 %)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,216 | INFO     | sum of square deviations: 6035722470.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,219 | INFO     | sum of deviations: -68801198500.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,219 | INFO     | mean x: 1748354512.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,219 | INFO     | mean y: 2520721.92936803
[2025-05-27 23:10:19] 2025-05-27 16:20:48,219 | INFO     | -- intersect: 19932013243.55663
[2025-05-27 23:10:19] 2025-05-27 16:20:48,219 | INFO     | intersect: 19932013243.55663
[2025-05-27 23:10:19] 2025-05-27 16:20:48,220 | INFO     | chi2: 1.0286211900266067
[2025-05-27 23:10:19] 2025-05-27 16:20:48,220 | INFO     | current chi2=1.0286211900266067 (change=1.0205278716423682 %)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,220 | INFO     | left removable region: 20
[2025-05-27 23:10:19] 2025-05-27 16:20:48,220 | INFO     | sum of square deviations: 4729621702.0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,222 | INFO     | sum of deviations: -31625509200.5
[2025-05-27 23:10:19] 2025-05-27 16:20:48,223 | INFO     | mean x: 1748354481.5
[2025-05-27 23:10:19] 2025-05-27 16:20:48,223 | INFO     | mean y: 2522148.4879032257
[2025-05-27 23:10:19] 2025-05-27 16:20:48,223 | INFO     | -- intersect: 11693224750.98828
[2025-05-27 23:10:19] 2025-05-27 16:20:48,223 | INFO     | intersect: 11693224750.98828
[2025-05-27 23:10:19] 2025-05-27 16:20:48,223 | INFO     | chi2: 0.1572722110237255
[2025-05-27 23:10:19] 2025-05-27 16:20:48,223 | INFO     | -- intersect: 11693224750.98828
[2025-05-27 23:10:19] 2025-05-27 16:20:48,224 | INFO     | current memory leak: -6.69 B/s (using 248 data points, chi2=0.16)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,224 | INFO     | ..............................
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . Timing measurements:
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . get job = 0 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . initial setup = 2 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . payload setup = 13 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . stage-in = 0 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . payload execution = 17039 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . stage-out = 8 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | . log creation = 1 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,225 | INFO     | ..............................
[2025-05-27 23:10:19] 2025-05-27 16:20:48,341 | INFO     | 
[2025-05-27 23:10:19] 2025-05-27 16:20:48,341 | INFO     | job summary report
[2025-05-27 23:10:19] 2025-05-27 16:20:48,341 | INFO     | --------------------------------------------------
[2025-05-27 23:10:19] 2025-05-27 16:20:48,341 | INFO     | PanDA job id: 6666011639
[2025-05-27 23:10:19] 2025-05-27 16:20:48,341 | INFO     | task id: 44871837
[2025-05-27 23:10:19] 2025-05-27 16:20:48,341 | INFO     | errors: (none)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | pilot state: finished 
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | transexitcode: 0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | exeerrorcode: 0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | exeerrordiag: 
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | exitcode: 0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | exitmsg: OK
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | cpuconsumptiontime: 65503 s
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | nevents: 400
[2025-05-27 23:10:19] 2025-05-27 16:20:48,342 | INFO     | neventsw: 0
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | pid: 7974
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | pgrp: 7974
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | corecount: 8
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | event service: False
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | sizes: {0: 2405064, 1: 2405263, 2: 2405263, 11: 2405497, 12: 2405525, 17056: 2436824, 17065: 2445767, 17066: 2445823, 17157: 2445993}
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | --------------------------------------------------
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | 
[2025-05-27 23:10:19] 2025-05-27 16:20:48,343 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-05-27 23:10:19] 2025-05-27 16:20:48,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | job 6666011639 has completed (purged errors)
[2025-05-27 23:10:19] 2025-05-27 16:20:48,770 | INFO     | overall cleanup function is called
[2025-05-27 23:10:19] 2025-05-27 16:20:49,780 | INFO     | --- collectZombieJob: --- 10, [7974]
[2025-05-27 23:10:19] 2025-05-27 16:20:49,780 | INFO     | zombie collector waiting for pid 7974
[2025-05-27 23:10:19] 2025-05-27 16:20:49,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 23:10:19] 2025-05-27 16:20:49,780 | INFO     | collected zombie processes
[2025-05-27 23:10:19] 2025-05-27 16:20:49,780 | INFO     | will attempt to kill all subprocesses of pid=7974
[2025-05-27 23:10:19] 2025-05-27 16:20:49,907 | INFO     | process IDs to be killed: [7974] (in reverse order)
[2025-05-27 23:10:19] 2025-05-27 16:20:50,635 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 23:10:19] 2025-05-27 16:20:50,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 23:10:19] 2025-05-27 16:20:50,639 | INFO     | did not find any defunct processes belonging to 7974
[2025-05-27 23:10:19] 2025-05-27 16:20:50,642 | INFO     | did not find any defunct processes belonging to 7974
[2025-05-27 23:10:19] 2025-05-27 16:20:50,642 | INFO     | ready for new job
[2025-05-27 23:10:19] 2025-05-27 16:20:50,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 23:10:19] 2025-05-27 16:20:50,645 | INFO     | **************************************
[2025-05-27 23:10:19] 2025-05-27 16:20:50,645 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 23:10:19] 2025-05-27 16:20:50,645 | INFO     | **************************************
[2025-05-27 23:10:19] 2025-05-27 16:20:50,645 | INFO     | 
[2025-05-27 23:10:19] 2025-05-27 16:20:50,646 | INFO     | pilot is running in a VM
[2025-05-27 23:10:19] 2025-05-27 16:20:50,646 | INFO     | architecture information:
[2025-05-27 23:10:19] 2025-05-27 16:20:50,646 | INFO     | executing command: cat /etc/os-release
[2025-05-27 23:10:19] 2025-05-27 16:20:50,831 | INFO     | cat /etc/os-release:
[2025-05-27 23:10:19] NAME="CentOS Linux"
[2025-05-27 23:10:19] VERSION="7 (Core)"
[2025-05-27 23:10:19] ID="centos"
[2025-05-27 23:10:19] ID_LIKE="rhel fedora"
[2025-05-27 23:10:19] VERSION_ID="7"
[2025-05-27 23:10:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 23:10:19] ANSI_COLOR="0;31"
[2025-05-27 23:10:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 23:10:19] HOME_URL="https://www.centos.org/"
[2025-05-27 23:10:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 23:10:19] 
[2025-05-27 23:10:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 23:10:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 23:10:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 23:10:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 23:10:19] 
[2025-05-27 23:10:19] 2025-05-27 16:20:50,832 | INFO     | **************************************
[2025-05-27 23:10:19] 2025-05-27 16:20:51,335 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-05-27 23:10:19] 2025-05-27 16:20:51,582 | INFO     | sufficient remaining disk space (495234056192 B)
[2025-05-27 23:10:19] 2025-05-27 16:20:51,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 23:10:19] 2025-05-27 16:20:51,583 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 23:10:19] 2025-05-27 16:20:51,583 | INFO     | update_server=False
[2025-05-27 23:10:19] 2025-05-27 16:20:51,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 23:10:19] 2025-05-27 16:20:51,679 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 23:10:19] 2025-05-27 16:20:51,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 23:10:19] 2025-05-27 16:20:51,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 23:10:19] 2025-05-27 16:20:51,707 | INFO     | all data control threads have been joined
[2025-05-27 23:10:19] 2025-05-27 16:20:51,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 23:10:19] 2025-05-27 16:20:51,748 | INFO     | aborting loop
[2025-05-27 23:10:19] 2025-05-27 16:20:52,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 23:10:19] 2025-05-27 16:20:52,073 | INFO     | all job control threads have been joined
[2025-05-27 23:10:19] 2025-05-27 16:20:52,295 | INFO     | all payload control threads have been joined
[2025-05-27 23:10:19] 2025-05-27 16:20:52,589 | INFO     | [job] retrieve thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:52,713 | INFO     | [data] control thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:52,728 | INFO     | [payload] failed_post thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:52,754 | INFO     | [job] job monitor thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:52,933 | INFO     | [job] validate thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:53,078 | INFO     | [job] control thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:53,150 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:53,301 | INFO     | [payload] control thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:53,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 23:10:19] 2025-05-27 16:20:53,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 23:10:19] 2025-05-27 16:20:53,475 | INFO     | [payload] validate_post thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:53,599 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:53,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:54,035 | INFO     | [data] copytool_in thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:54,039 | INFO     | [data] copytool_out thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:54,068 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:54,367 | INFO     | [job] queue monitor thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:57,450 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 23:10:19] 2025-05-27 16:20:58,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847940728640)>', '<ExcThread(monitor, started 139847255701248)>']
[2025-05-27 23:10:19] 2025-05-27 16:20:58,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 23:10:19] 2025-05-27 16:20:58,720 | INFO     | [monitor] control thread has ended
[2025-05-27 23:10:19] 2025-05-27 16:21:03,451 | INFO     | all workflow threads have been joined
[2025-05-27 23:10:19] 2025-05-27 16:21:03,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 23:10:19] 2025-05-27 16:21:03,451 | INFO     | traces error code: 0
[2025-05-27 23:10:19] 2025-05-27 16:21:03,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 23:10:19] 2025-05-27 16:21:03,866 [wrapper] ==== pilot stdout END ====
[2025-05-27 23:10:19] 2025-05-27 16:21:03,992 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 23:10:19] 2025-05-27 16:21:04,100 [wrapper] pilotpid: 31779
[2025-05-27 23:10:19] 2025-05-27 16:21:04,217 [wrapper] Pilot exit status: 0
[2025-05-27 23:10:19] 2025-05-27 16:21:04,668 [wrapper] pandaids: 6666011639
[2025-05-27 23:10:19] 2025-05-27 16:21:05,800 [wrapper] cleanup supervisor_pilot  6979 31780
[2025-05-27 23:10:19] 2025-05-27 16:21:05,865 [wrapper] Test setup, not cleaning
[2025-05-27 23:10:19] 2025-05-27 16:21:05,962 [wrapper] apfmon messages muted
[2025-05-27 23:10:19] 2025-05-27 16:21:06,057 [wrapper] ==== wrapper stdout END ====
[2025-05-27 23:10:19] 2025-05-27 16:21:06,178 [wrapper] ==== wrapper stderr END ====
[2025-05-27 23:10:19]  *** Error codes and diagnostics ***
[2025-05-27 23:10:19]     "exeErrorCode": 0,
[2025-05-27 23:10:19]     "exeErrorDiag": "",
[2025-05-27 23:10:19]     "pilotErrorCode": 0,
[2025-05-27 23:10:19]     "pilotErrorDiag": "",
[2025-05-27 23:10:19]  *** Listing of results directory ***
[2025-05-27 23:10:19] total 407840
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc    495897 May 26 17:09 pilot3.tar.gz
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc      5111 May 26 17:34 queuedata.json
[2025-05-27 23:10:19] -rwx------. 1 boinc boinc     37140 May 26 17:35 runpilot2-wrapper.sh
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc       100 May 27 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 23:10:19] -rwxr-xr-x. 1 boinc boinc      7986 May 27 12:47 run_atlas
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc       105 May 27 12:47 job.xml
[2025-05-27 23:10:19] -rw-r--r--. 2 boinc boinc 223273715 May 27 12:47 EVNT.44871834._002112.pool.root.1
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc      6372 May 27 12:47 init_data.xml
[2025-05-27 23:10:19] -rw-r--r--. 2 boinc boinc     15093 May 27 12:47 start_atlas.sh
[2025-05-27 23:10:19] drwxrwx--x. 2 boinc boinc        68 May 27 12:47 shared
[2025-05-27 23:10:19] -rw-r--r--. 2 boinc boinc    508880 May 27 12:47 input.tar.gz
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc         0 May 27 12:47 boinc_lockfile
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc      2559 May 27 13:34 pandaJob.out
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc    990747 May 27 13:34 agis_schedconf.cvmfs.json
[2025-05-27 23:10:19] drwx------. 4 boinc boinc      4096 May 27 13:34 pilot3
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc 186733921 May 27 18:17 HITS.44871837._053102.pool.root.1
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc       531 May 27 18:17 boinc_task_state.xml
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc      1017 May 27 18:19 memory_monitor_summary.json
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc   1603667 May 27 18:19 agis_ddmendpoints.agis.ALL.json
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc    424405 May 27 18:19 log.44871837._053102.job.log.tgz.1
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc        95 May 27 18:20 pilot_heartbeat.json
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc      7688 May 27 18:20 heartbeat.json
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc      4417 May 27 18:21 pilotlog.txt
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc   1468756 May 27 18:21 log.44871837._053102.job.log.1
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc       357 May 27 18:21 output.list
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc       620 May 27 18:21 runtime_log
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc   1914880 May 27 18:21 result.tar.gz
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc      8673 May 27 18:21 runtime_log.err
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc       657 May 27 18:21 gSzMDm41od7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5NQKDmhkdUun.diag
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc      8192 May 27 23:10 boinc_mmap_file
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc        28 May 27 23:10 wrapper_checkpoint.txt
[2025-05-27 23:10:19] -rw-r--r--. 1 boinc boinc     20488 May 27 23:10 stderr.txt
[2025-05-27 23:10:19] HITS file was successfully produced:
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc 186733921 May 27 18:17 shared/HITS.pool.root.1
[2025-05-27 23:10:19]  *** Contents of shared directory: ***
[2025-05-27 23:10:19] total 402792
[2025-05-27 23:10:19] -rw-r--r--. 2 boinc boinc 223273715 May 27 12:47 ATLAS.root_0
[2025-05-27 23:10:19] -rw-r--r--. 2 boinc boinc     15093 May 27 12:47 start_atlas.sh
[2025-05-27 23:10:19] -rw-r--r--. 2 boinc boinc    508880 May 27 12:47 input.tar.gz
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc 186733921 May 27 18:17 HITS.pool.root.1
[2025-05-27 23:10:19] -rw-------. 1 boinc boinc   1914880 May 27 18:21 result.tar.gz
23:10:21 (28575): run_atlas exited; CPU time 65722.596588
23:10:21 (28575): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN