Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 23:44:23 (5472): Detected: vboxwrapper 26206
2025-05-26 23:44:23 (5472): Detected: BOINC client v8.0.2
2025-05-26 23:44:24 (5472): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-26 23:44:24 (5472): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 23:44:25 (5472): Create VM. (boinc_1947662b64d50d19, slot#0)
2025-05-26 23:44:25 (5472): Setting Memory Size for VM. (4400MB)
2025-05-26 23:44:26 (5472): Setting CPU Count for VM. (4)
2025-05-26 23:44:26 (5472): Setting Chipset Options for VM.
2025-05-26 23:44:26 (5472): Setting Graphics Controller Options for VM.
2025-05-26 23:44:27 (5472): Setting Boot Options for VM.
2025-05-26 23:44:27 (5472): Setting Network Configuration for NAT.
2025-05-26 23:44:27 (5472): Enabling VM Network Access.
2025-05-26 23:44:27 (5472): Disabling USB Support for VM.
2025-05-26 23:44:28 (5472): Disabling COM Port Support for VM.
2025-05-26 23:44:28 (5472): Disabling LPT Port Support for VM.
2025-05-26 23:44:28 (5472): Disabling Audio Support for VM.
2025-05-26 23:44:28 (5472): Disabling Clipboard Support for VM.
2025-05-26 23:44:29 (5472): Disabling Drag and Drop Support for VM.
2025-05-26 23:44:29 (5472): Adding storage controller(s) to VM.
2025-05-26 23:44:29 (5472): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 23:44:32 (5472): Adding VirtualBox Guest Additions to VM.
2025-05-26 23:44:32 (5472): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 23:44:33 (5472): forwarding host port 65158 to guest port 80
2025-05-26 23:44:33 (5472): Enabling remote desktop for VM.
2025-05-26 23:44:33 (5472): Required extension pack not installed, remote desktop not enabled.
2025-05-26 23:44:33 (5472): Enabling shared directory for VM.
2025-05-26 23:44:34 (5472): Starting VM using VBoxManage interface. (boinc_1947662b64d50d19, slot#0)
2025-05-26 23:44:41 (5472): Successfully started VM. (PID = '5564')
2025-05-26 23:44:41 (5472): Reporting VM Process ID to BOINC.
2025-05-26 23:44:41 (5472): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-26 23:44:41 (5472): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 23:44:41 (5472): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-26 23:44:41 (5472): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 23:44:41 (5472): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 23:44:41 (5472): Detected: Web Application Enabled (http://localhost:65158)
2025-05-26 23:44:41 (5472): Preference change detected
2025-05-26 23:44:41 (5472): Setting CPU throttle for VM. (100%)
2025-05-26 23:44:41 (5472): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 23:44:43 (5472): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 23:44:43 (5472): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 23:44:46 (5472): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 23:44:46 (5472): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 23:44:46 (5472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 23:44:52 (5472): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 23:44:52 (5472): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 23:44:59 (5472): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.000277 main     Log opened 2025-05-26T23:44:57.604607000Z
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.000410 main     OS Product: Linux
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.000449 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.000482 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.000516 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.000517 main     Process ID: 1265
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.000517 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 23:44:59 (5472): Guest Log: 00:00:00.001502 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 23:44:59 (5472): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 23:44:59 (5472): Guest Log: [INFO] Mounting shared directory
2025-05-26 23:44:59 (5472): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 23:45:01 (5472): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 23:45:01 (5472): Guest Log: [INFO] Detected branch: prod
2025-05-26 23:45:02 (5472): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 23:45:02 (5472): Guest Log: Copying input files
2025-05-26 23:45:04 (5472): Guest Log: Copied input files into RunAtlas.
2025-05-26 23:45:04 (5472): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 23:45:04 (5472): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 23:45:04 (5472): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 23:45:04 (5472): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 23:45:09 (5472): Guest Log: 00:00:10.042774 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 335 615 000ns (GuestNow=1 748 295 909 273 181 000 ns GuestLast=1 748 303 097 608 796 000 ns fSetTimeLastLoop=true )
2025-05-26 23:45:14 (5472): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 23:45:15 (5472): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 23:45:15 (5472): Guest Log: 2.6.3.0 1541 0 30112 146457 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 23:45:16 (5472): Guest Log: copied the webapp to /var/www
2025-05-26 23:45:16 (5472): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-26 23:45:16 (5472): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-26 23:45:16 (5472): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 23:45:16 (5472): Guest Log:  *** Starting ATLAS job. (PandaID=6666011647 taskID=44871837) ***
2025-05-26 23:52:22 (5472): Guest Log:  *** Job finished ***
2025-05-26 23:52:22 (5472): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:12,849 | INFO     | [job] validate thread has finished
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:13,710 | INFO     | [data] copytool_out thread has finished
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:14,785 | INFO     | [data] queue_monitor thread has finished
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:15,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140347058878272)>', '<ExcThread(monitor, started 140346629543680)>']
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:16,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:16,715 | INFO     | [monitor] control thread has ended
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:20,822 | INFO     | all workflow threads have been joined
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:20,822 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:20,822 | INFO     | traces error code: 0
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:20,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:20,993 [wrapper] ==== pilot stdout END ====
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,002 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,011 [wrapper] pilotpid: 5844
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,021 [wrapper] Pilot exit status: 0
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,109 [wrapper] pandaids: 6666011647
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,161 [wrapper] cleanup supervisor_pilot  5850 5845
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,170 [wrapper] Test setup, not cleaning
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,178 [wrapper] apfmon messages muted
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,187 [wrapper] ==== wrapper stdout END ====
2025-05-26 23:52:22 (5472): Guest Log: 2025-05-26 21:52:21,195 [wrapper] ==== wrapper stderr END ====
2025-05-26 23:52:22 (5472): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 23:52:22 (5472): Guest Log:     "exeErrorCode": 65,
2025-05-26 23:52:22 (5472): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-05-26 23:52:22 (5472): Guest Log:     "pilotErrorCode": 1305,
2025-05-26 23:52:22 (5472): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-05-26 23:52:22 (5472): Guest Log:  *** Listing of results directory ***
2025-05-26 23:52:22 (5472): Guest Log: total 3984
2025-05-26 23:52:22 (5472): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 26 15:09 pilot3.tar.gz
2025-05-26 23:52:22 (5472): Guest Log: -rwx------. 1 atlas atlas   37140 May 26 15:38 runpilot2-wrapper.sh
2025-05-26 23:52:22 (5472): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 26 15:38 queuedata.json
2025-05-26 23:52:22 (5472): Guest Log: -rwxr-xr-x. 1 atlas atlas    9084 May 26 21:45 init_data.xml
2025-05-26 23:52:22 (5472): Guest Log: -rwxr-xr-x. 1 atlas atlas  508874 May 26 21:45 input.tar.gz
2025-05-26 23:52:22 (5472): Guest Log: -rwxr-xr-x. 1 atlas atlas   15093 May 26 21:45 start_atlas.sh
2025-05-26 23:52:22 (5472): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 26 21:45 EVNT.44871834._002113.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 23:52:22 (5472): Guest Log: -rw-r--r--. 1 atlas atlas    2559 May 26 21:45 pandaJob.out
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas  990418 May 26 21:45 agis_schedconf.cvmfs.json
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas 1603667 May 26 21:45 agis_ddmendpoints.agis.ALL.json
2025-05-26 23:52:22 (5472): Guest Log: drwx------. 4 atlas atlas    4096 May 26 21:46 pilot3
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas   45319 May 26 21:49 log.44871837._053110.job.log.tgz.1
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas      95 May 26 21:52 pilot_heartbeat.json
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas    7999 May 26 21:52 heartbeat.json
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas    4527 May 26 21:52 pilotlog.txt
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas  113365 May 26 21:52 log.44871837._053110.job.log.1
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas     188 May 26 21:52 output.list
2025-05-26 23:52:22 (5472): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 26 21:52 runtime_log
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas  174080 May 26 21:52 result.tar.gz
2025-05-26 23:52:22 (5472): Guest Log: -rw-r--r--. 1 atlas atlas    8451 May 26 21:52 runtime_log.err
2025-05-26 23:52:22 (5472): Guest Log: -rw-------. 1 atlas atlas     646 May 26 21:52 EYmMDm04od7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOOQKDm050cxm.diag
2025-05-26 23:52:22 (5472): Guest Log: Looking for outputfile HITS.44871837._053110.pool.root.1
2025-05-26 23:52:22 (5472): Guest Log: No HITS file was produced
2025-05-26 23:52:22 (5472): Guest Log: Successfully finished the ATLAS job!
2025-05-26 23:52:22 (5472): Guest Log: Copying the results back to the shared directory!
2025-05-26 23:52:22 (5472): Guest Log:  *** Contents of shared directory: ***
2025-05-26 23:52:22 (5472): Guest Log: total 220540
2025-05-26 23:52:22 (5472): Guest Log: -rwxrwxrwx. 1 root root 225114934 May 26 21:44 ATLAS.root_0
2025-05-26 23:52:22 (5472): Guest Log: -rwxrwxrwx. 1 root root      9084 May 26 21:44 init_data.xml
2025-05-26 23:52:22 (5472): Guest Log: -rwxrwxrwx. 1 root root    508874 May 26 21:36 input.tar.gz
2025-05-26 23:52:22 (5472): Guest Log: -rwxrwxrwx. 1 root root    174080 May 26  2025 result.tar.gz
2025-05-26 23:52:22 (5472): Guest Log: -rwxrwxrwx. 1 root root     15093 May 26 21:36 start_atlas.sh
2025-05-26 23:52:22 (5472): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 23:52:22 (5472): VM Completion File Detected.
2025-05-26 23:52:22 (5472): Powering off VM.
2025-05-26 23:52:23 (5472): Successfully stopped VM.
2025-05-26 23:52:23 (5472): Deregistering VM. (boinc_1947662b64d50d19, slot#0)
2025-05-26 23:52:23 (5472): Removing network bandwidth throttle group from VM.
2025-05-26 23:52:23 (5472): Removing VM from VirtualBox.
23:52:28 (5472): called boinc_finish(0)

</stderr_txt>
]]>

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