Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
00:33:22 (457719): wrapper (7.7.26015): starting
00:33:22 (457719): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 00:33:22] Arguments: --nthreads 12
[2025-05-27 00:33:22] Threads: 12
[2025-05-27 00:33:22] Checking for CVMFS
[2025-05-27 00:33:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 00:33:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 00:33:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 00:33:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 00:33:22] 2.12.6.0 434683 57 46552 146460 2 56 3433982 6144000 0 130560 0 60261 99.972 72713 10561 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-27 00:33:22] CVMFS is ok
[2025-05-27 00:33:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 00:33:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-27 00:33:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-27 00:33:22] Further information can be found at the LHC@home message board.
[2025-05-27 00:33:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 00:33:22] Checking for apptainer binary...
[2025-05-27 00:33:22] apptainer is not installed, using version from CVMFS
[2025-05-27 00:33:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 00:33:22] Debian-bookworm-latest-amd64-base
[2025-05-27 00:33:22] apptainer works
[2025-05-27 00:33:22] Set ATHENA_PROC_NUMBER=12
[2025-05-27 00:33:22] Set ATHENA_CORE_NUMBER=12
[2025-05-27 00:33:22] Starting ATLAS job with PandaID=6666011475
[2025-05-27 00:33:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 01:29:44]  *** The last 200 lines of the pilot log: ***
[2025-05-27 01:29:44] ]
[2025-05-27 01:29:44] 2025-05-26 23:29:16,967 | INFO     | transferring file log.44871837._052950.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475/log.44871837._052950.job.log.tgz.1 to /var/lib/boinc
[2025-05-27 01:29:44] 2025-05-26 23:29:16,967 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475/log.44871837._052950.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.448718
[2025-05-27 01:29:44] 2025-05-26 23:29:16,986 | INFO     | adding to output.list: log.44871837._052950.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/21/log.44871837._052950.job.log.tg
[2025-05-27 01:29:44] 2025-05-26 23:29:16,987 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-27 01:29:44] 2025-05-26 23:29:16,987 | INFO     | summary of transferred files:
[2025-05-27 01:29:44] 2025-05-26 23:29:16,987 | INFO     |  -- lfn=log.44871837._052950.job.log.tgz.1, status_code=0, status=transferred
[2025-05-27 01:29:44] 2025-05-26 23:29:16,987 | INFO     | stage-out finished correctly
[2025-05-27 01:29:44] 2025-05-26 23:29:17,030 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-27 01:29:44] 2025-05-26 23:29:17,169 | WARNING  | process 468085 can no longer be monitored (due to stat problems) - aborting
[2025-05-27 01:29:44] 2025-05-26 23:29:17,169 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 01:29:44] 2025-05-26 23:29:17,170 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 01:29:44] 2025-05-26 23:29:17,170 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4560128 B
[2025-05-27 01:29:44] 2025-05-26 23:29:17,170 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16042 B
[2025-05-27 01:29:44] 2025-05-26 23:29:17,170 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-05-27 01:29:44] 2025-05-26 23:29:17,182 | INFO     | sufficient remaining disk space (821895888896 B)
[2025-05-27 01:29:44] 2025-05-26 23:29:17,182 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-27 01:29:44] 2025-05-26 23:29:17,182 | INFO     | size of work directory /var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475: 4848455 B (within 2537553920 B limit)
[2025-05-27 01:29:44] 2025-05-26 23:29:17,182 | INFO     | pfn file=/var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475/HITS.44871837._052950.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-27 01:29:44] 2025-05-26 23:29:17,182 | INFO     | total size of present files: 0 B (workdir size: 4848455 B)
[2025-05-27 01:29:44] 2025-05-26 23:29:17,182 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475/HITS.44871837._052950.pool.root.1 since it does not exist
[2025-05-27 01:29:44] 2025-05-26 23:29:17,212 | INFO     | number of running child processes to parent process 468085: 1
[2025-05-27 01:29:44] 2025-05-26 23:29:17,212 | INFO     | maximum number of monitored processes: 6
[2025-05-27 01:29:44] 2025-05-26 23:29:19,435 | INFO     | job 6666011475 has state=finished
[2025-05-27 01:29:44] 2025-05-26 23:29:19,436 | INFO     | preparing for final server update for job 6666011475 in state='finished'
[2025-05-27 01:29:44] 2025-05-26 23:29:19,436 | INFO     | this job has now completed (state=finished)
[2025-05-27 01:29:44] 2025-05-26 23:29:19,436 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-27 01:29:44] 2025-05-26 23:29:19,436 | INFO     | log transfer has been attempted: DONE
[2025-05-27 01:29:44] 2025-05-26 23:29:19,436 | INFO     | job 6666011475 has finished - writing final server update
[2025-05-27 01:29:44] 2025-05-26 23:29:19,437 | INFO     | total number of processed events: 400 (read)
[2025-05-27 01:29:44] 2025-05-26 23:29:19,439 | INFO     | executing command: lscpu
[2025-05-27 01:29:44] 2025-05-26 23:29:19,455 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-27 01:29:44] 2025-05-26 23:29:19,714 | INFO     | monitor loop #256: job 0:6666011475 is in state 'finished'
[2025-05-27 01:29:44] 2025-05-26 23:29:19,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 01:29:44] 2025-05-26 23:29:22,217 | INFO     | monitor loop #257: job 0:6666011475 is in state 'finished'
[2025-05-27 01:29:44] 2025-05-26 23:29:22,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 01:29:44] 2025-05-26 23:29:24,718 | INFO     | monitor loop #258: job 0:6666011475 is in state 'finished'
[2025-05-27 01:29:44] 2025-05-26 23:29:24,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 01:29:44] 2025-05-26 23:29:25,327 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-27 01:29:44] 2025-05-26 23:29:25,327 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6666011475/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 01:29:44] 2025-05-26 23:29:25,327 | INFO     | extracted standard info from prmon json
[2025-05-27 01:29:44] 2025-05-26 23:29:25,327 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 01:29:44] 2025-05-26 23:29:25,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 01:29:44] 2025-05-26 23:29:25,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 01:29:44] 2025-05-26 23:29:25,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 01:29:44] 2025-05-26 23:29:25,328 | INFO     | fitting pss+swap vs Time
[2025-05-27 01:29:44] 2025-05-26 23:29:25,328 | INFO     | sum of square deviations: 34277852.0
[2025-05-27 01:29:44] 2025-05-26 23:29:25,328 | INFO     | sum of deviations: -4699034228.0
[2025-05-27 01:29:44] 2025-05-26 23:29:25,328 | INFO     | mean x: 1748300563.5
[2025-05-27 01:29:44] 2025-05-26 23:29:25,328 | INFO     | mean y: 3071227.25
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | -- intersect: 239671653398.5654
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | intersect: 239671653398.5654
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | chi2: 0.08441791654816064
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | -- intersect: 239671653398.5654
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | current memory leak: -137.09 B/s (using 48 data points, chi2=0.08)
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | ..............................
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . Timing measurements:
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . get job = 0 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . initial setup = 1 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . payload setup = 2 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . stage-in = 0 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . payload execution = 3330 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . stage-out = 0 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | . log creation = 0 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,329 | INFO     | ..............................
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | 
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | job summary report
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | --------------------------------------------------
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | PanDA job id: 6666011475
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | task id: 44871837
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | errors: (none)
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | pilot state: finished 
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | transexitcode: 0
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | exeerrorcode: 0
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | exeerrordiag: 
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | exitcode: 0
[2025-05-27 01:29:44] 2025-05-26 23:29:25,381 | INFO     | exitmsg: OK
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | cpuconsumptiontime: 36196 s
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | nevents: 400
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | neventsw: 0
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | pid: 468085
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | pgrp: 468085
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | corecount: 12
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | event service: False
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | sizes: {0: 2405241, 2: 2405447, 11: 2405475, 3336: 2431094, 3337: 2440105, 3345: 2440247}
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | --------------------------------------------------
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | 
[2025-05-27 01:29:44] 2025-05-26 23:29:25,382 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-05-27 01:29:44] 2025-05-26 23:29:25,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | job 6666011475 has completed (purged errors)
[2025-05-27 01:29:44] 2025-05-26 23:29:25,393 | INFO     | overall cleanup function is called
[2025-05-27 01:29:44] 2025-05-26 23:29:26,400 | INFO     | --- collectZombieJob: --- 10, [468085]
[2025-05-27 01:29:44] 2025-05-26 23:29:26,400 | INFO     | zombie collector waiting for pid 468085
[2025-05-27 01:29:44] 2025-05-26 23:29:26,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 01:29:44] 2025-05-26 23:29:26,401 | INFO     | collected zombie processes
[2025-05-27 01:29:44] 2025-05-26 23:29:26,401 | INFO     | will attempt to kill all subprocesses of pid=468085
[2025-05-27 01:29:44] 2025-05-26 23:29:26,458 | INFO     | process IDs to be killed: [468085] (in reverse order)
[2025-05-27 01:29:44] 2025-05-26 23:29:26,479 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 01:29:44] 2025-05-26 23:29:26,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 01:29:44] 2025-05-26 23:29:26,481 | INFO     | did not find any defunct processes belonging to 468085
[2025-05-27 01:29:44] 2025-05-26 23:29:26,481 | INFO     | did not find any defunct processes belonging to 468085
[2025-05-27 01:29:44] 2025-05-26 23:29:26,482 | INFO     | ready for new job
[2025-05-27 01:29:44] 2025-05-26 23:29:26,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 01:29:44] 2025-05-26 23:29:26,482 | INFO     | **************************************
[2025-05-27 01:29:44] 2025-05-26 23:29:26,482 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 01:29:44] 2025-05-26 23:29:26,482 | INFO     | **************************************
[2025-05-27 01:29:44] 2025-05-26 23:29:26,482 | INFO     | 
[2025-05-27 01:29:44] 2025-05-26 23:29:26,483 | INFO     | architecture information:
[2025-05-27 01:29:44] 2025-05-26 23:29:26,483 | INFO     | executing command: cat /etc/os-release
[2025-05-27 01:29:44] 2025-05-26 23:29:26,493 | INFO     | cat /etc/os-release:
[2025-05-27 01:29:44] NAME="CentOS Linux"
[2025-05-27 01:29:44] VERSION="7 (Core)"
[2025-05-27 01:29:44] ID="centos"
[2025-05-27 01:29:44] ID_LIKE="rhel fedora"
[2025-05-27 01:29:44] VERSION_ID="7"
[2025-05-27 01:29:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 01:29:44] ANSI_COLOR="0;31"
[2025-05-27 01:29:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 01:29:44] HOME_URL="https://www.centos.org/"
[2025-05-27 01:29:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 01:29:44] 
[2025-05-27 01:29:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 01:29:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 01:29:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 01:29:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 01:29:44] 
[2025-05-27 01:29:44] 2025-05-26 23:29:26,493 | INFO     | **************************************
[2025-05-27 01:29:44] 2025-05-26 23:29:26,996 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-05-27 01:29:44] 2025-05-26 23:29:27,009 | INFO     | sufficient remaining disk space (821896937472 B)
[2025-05-27 01:29:44] 2025-05-26 23:29:27,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 01:29:44] 2025-05-26 23:29:27,010 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 01:29:44] 2025-05-26 23:29:27,010 | INFO     | update_server=False
[2025-05-27 01:29:44] 2025-05-26 23:29:27,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 01:29:44] 2025-05-26 23:29:27,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 01:29:44] 2025-05-26 23:29:27,220 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-27 01:29:44] 2025-05-26 23:29:27,221 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-27 01:29:44] 2025-05-26 23:29:27,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 01:29:44] 2025-05-26 23:29:27,221 | INFO     | will abort loop
[2025-05-27 01:29:44] 2025-05-26 23:29:27,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 01:29:44] 2025-05-26 23:29:27,570 | INFO     | all payload control threads have been joined
[2025-05-27 01:29:44] 2025-05-26 23:29:27,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 01:29:44] 2025-05-26 23:29:27,653 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 01:29:44] 2025-05-26 23:29:27,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 01:29:44] 2025-05-26 23:29:27,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 01:29:44] 2025-05-26 23:29:27,804 | INFO     | all job control threads have been joined
[2025-05-27 01:29:44] 2025-05-26 23:29:28,013 | INFO     | [job] queue monitor thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:28,015 | INFO     | [job] retrieve thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:28,106 | INFO     | all data control threads have been joined
[2025-05-27 01:29:44] 2025-05-26 23:29:28,226 | INFO     | [job] job monitor thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:28,554 | INFO     | [payload] validate_post thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:28,574 | INFO     | [payload] control thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:28,789 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:28,809 | INFO     | [job] control thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:29,019 | INFO     | [job] validate thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:29,111 | INFO     | [data] control thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:29,131 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:29,133 | INFO     | [data] copytool_in thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:29,169 | INFO     | [payload] failed_post thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:29,323 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:29,545 | INFO     | [data] copytool_out thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:31,583 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:37,480 | INFO     | job.realtimelogging is not enabled
[2025-05-27 01:29:44] 2025-05-26 23:29:38,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 01:29:44] 2025-05-26 23:29:39,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458526168896)>', '<ExcThread(monitor, started 140457694713600)>']
[2025-05-27 01:29:44] 2025-05-26 23:29:39,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 01:29:44] 2025-05-26 23:29:39,710 | INFO     | [monitor] control thread has ended
[2025-05-27 01:29:44] 2025-05-26 23:29:44,211 | INFO     | all workflow threads have been joined
[2025-05-27 01:29:44] 2025-05-26 23:29:44,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 01:29:44] 2025-05-26 23:29:44,211 | INFO     | traces error code: 0
[2025-05-27 01:29:44] 2025-05-26 23:29:44,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 01:29:44] 2025-05-26 23:29:44,278 [wrapper] ==== pilot stdout END ====
[2025-05-27 01:29:44] 2025-05-26 23:29:44,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 01:29:44] 2025-05-26 23:29:44,281 [wrapper] pilotpid: 461501
[2025-05-27 01:29:44] 2025-05-26 23:29:44,282 [wrapper] Pilot exit status: 0
[2025-05-27 01:29:44] 2025-05-26 23:29:44,287 [wrapper] pandaids: 6666011475
[2025-05-27 01:29:44] 2025-05-26 23:29:44,300 [wrapper] cleanup supervisor_pilot  477821 461502
[2025-05-27 01:29:44] 2025-05-26 23:29:44,302 [wrapper] Test setup, not cleaning
[2025-05-27 01:29:44] 2025-05-26 23:29:44,303 [wrapper] apfmon messages muted
[2025-05-27 01:29:44] 2025-05-26 23:29:44,304 [wrapper] ==== wrapper stdout END ====
[2025-05-27 01:29:44] 2025-05-26 23:29:44,306 [wrapper] ==== wrapper stderr END ====
[2025-05-27 01:29:44]  *** Error codes and diagnostics ***
[2025-05-27 01:29:44]     "exeErrorCode": 0,
[2025-05-27 01:29:44]     "exeErrorDiag": "",
[2025-05-27 01:29:44]     "pilotErrorCode": 0,
[2025-05-27 01:29:44]     "pilotErrorDiag": "",
[2025-05-27 01:29:44]  *** Listing of results directory ***
[2025-05-27 01:29:44] total 418636
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc    495897 May 26 17:09 pilot3.tar.gz
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc      5111 May 26 17:26 queuedata.json
[2025-05-27 01:29:44] -rwx------ 1 boinc boinc     37140 May 26 17:28 runpilot2-wrapper.sh
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc       100 May 27 00:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 01:29:44] -rwxr-xr-x 1 boinc boinc      7986 May 27 00:33 run_atlas
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc       105 May 27 00:33 job.xml
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc      6727 May 27 00:33 init_data.xml
[2025-05-27 01:29:44] -rw-r--r-- 2 boinc boinc 222192787 May 27 00:33 EVNT.44871834._002106.pool.root.1
[2025-05-27 01:29:44] -rw-r--r-- 2 boinc boinc     15093 May 27 00:33 start_atlas.sh
[2025-05-27 01:29:44] drwxrwx--x 2 boinc boinc      4096 May 27 00:33 shared
[2025-05-27 01:29:44] -rw-r--r-- 2 boinc boinc    508878 May 27 00:33 input.tar.gz
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc         0 May 27 00:33 boinc_lockfile
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc      2559 May 27 00:33 pandaJob.out
[2025-05-27 01:29:44] -rw------- 1 boinc boinc    990418 May 27 00:33 agis_schedconf.cvmfs.json
[2025-05-27 01:29:44] -rw------- 1 boinc boinc   1603667 May 27 00:33 agis_ddmendpoints.agis.ALL.json
[2025-05-27 01:29:44] drwx------ 4 boinc boinc      4096 May 27 00:33 pilot3
[2025-05-27 01:29:44] -rw------- 1 boinc boinc        95 May 27 01:28 pilot_heartbeat.json
[2025-05-27 01:29:44] -rw------- 1 boinc boinc 201240402 May 27 01:28 HITS.44871837._052950.pool.root.1
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc       529 May 27 01:28 boinc_task_state.xml
[2025-05-27 01:29:44] -rw------- 1 boinc boinc      1012 May 27 01:29 memory_monitor_summary.json
[2025-05-27 01:29:44] -rw------- 1 boinc boinc    361080 May 27 01:29 log.44871837._052950.job.log.tgz.1
[2025-05-27 01:29:44] -rw------- 1 boinc boinc      7693 May 27 01:29 heartbeat.json
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc        27 May 27 01:29 wrapper_checkpoint.txt
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc      8192 May 27 01:29 boinc_mmap_file
[2025-05-27 01:29:44] -rw------- 1 boinc boinc      4619 May 27 01:29 pilotlog.txt
[2025-05-27 01:29:44] -rw------- 1 boinc boinc    343504 May 27 01:29 log.44871837._052950.job.log.1
[2025-05-27 01:29:44] -rw------- 1 boinc boinc       357 May 27 01:29 output.list
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc       620 May 27 01:29 runtime_log
[2025-05-27 01:29:44] -rw------- 1 boinc boinc    727040 May 27 01:29 result.tar.gz
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc      8960 May 27 01:29 runtime_log.err
[2025-05-27 01:29:44] -rw------- 1 boinc boinc       705 May 27 01:29 1rZMDm2vod7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh6WKDm4KC3On.diag
[2025-05-27 01:29:44] -rw-r--r-- 1 boinc boinc     22674 May 27 01:29 stderr.txt
[2025-05-27 01:29:44] HITS file was successfully produced:
[2025-05-27 01:29:44] -rw------- 1 boinc boinc 201240402 May 27 01:28 shared/HITS.pool.root.1
[2025-05-27 01:29:44]  *** Contents of shared directory: ***
[2025-05-27 01:29:44] total 414744
[2025-05-27 01:29:44] -rw-r--r-- 2 boinc boinc 222192787 May 27 00:33 ATLAS.root_0
[2025-05-27 01:29:44] -rw-r--r-- 2 boinc boinc     15093 May 27 00:33 start_atlas.sh
[2025-05-27 01:29:44] -rw-r--r-- 2 boinc boinc    508878 May 27 00:33 input.tar.gz
[2025-05-27 01:29:44] -rw------- 1 boinc boinc 201240402 May 27 01:28 HITS.pool.root.1
[2025-05-27 01:29:44] -rw------- 1 boinc boinc    727040 May 27 01:29 result.tar.gz
01:29:45 (457719): run_atlas exited; CPU time 36211.815515
01:29:45 (457719): called boinc_finish(0)

</stderr_txt>
]]>

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