Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:00 (2275): wrapper (7.7.26015): starting
08:23:00 (2275): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 08:23:00] Arguments: --nthreads 8
[2025-05-27 08:23:00] Threads: 8
[2025-05-27 08:23:00] Checking for CVMFS
[2025-05-27 08:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 08:23:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 08:23:00] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 08:23:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 08:23:01] 2.11.2.0 26253 21320 94324 146471 1 130 22575557 25165824 4040 130560 0 12496257 99.767 13965435 1981 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 08:23:01] CVMFS is ok
[2025-05-27 08:23:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 08:23:01] Checking for apptainer binary...
[2025-05-27 08:23:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 08:23:01] Running /usr/bin/apptainer --version
[2025-05-27 08:23:01] apptainer version 1.3.2-1.el7
[2025-05-27 08:23:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 08:23:02] cg-vwn377.simple-grid.lan
[2025-05-27 08:23:02] apptainer works
[2025-05-27 08:23:02] Set ATHENA_PROC_NUMBER=8
[2025-05-27 08:23:02] Set ATHENA_CORE_NUMBER=8
[2025-05-27 08:23:02] Starting ATLAS job with PandaID=6665894860
[2025-05-27 08:23:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 13:57:06]  *** The last 200 lines of the pilot log: ***
[2025-05-27 13:57:06] 2025-05-27 11:40:54,305 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6665894860/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,306 | INFO     | extracted standard info from prmon json
[2025-05-27 13:57:06] 2025-05-27 11:40:54,306 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 13:57:06] 2025-05-27 11:40:54,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 13:57:06] 2025-05-27 11:40:54,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 13:57:06] 2025-05-27 11:40:54,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 13:57:06] 2025-05-27 11:40:54,315 | INFO     | fitting pss+swap vs Time
[2025-05-27 13:57:06] 2025-05-27 11:40:54,316 | INFO     | sum of square deviations: 9237596457.5
[2025-05-27 13:57:06] 2025-05-27 11:40:54,319 | INFO     | sum of deviations: -55272540694.50001
[2025-05-27 13:57:06] 2025-05-27 11:40:54,319 | INFO     | mean x: 1748336497.5
[2025-05-27 13:57:06] 2025-05-27 11:40:54,320 | INFO     | mean y: 2517804.2419354836
[2025-05-27 13:57:06] 2025-05-27 11:40:54,320 | INFO     | -- intersect: 10463572327.498411
[2025-05-27 13:57:06] 2025-05-27 11:40:54,320 | INFO     | intersect: 10463572327.498411
[2025-05-27 13:57:06] 2025-05-27 11:40:54,320 | INFO     | chi2: 2.5793932725015902
[2025-05-27 13:57:06] 2025-05-27 11:40:54,321 | INFO     | sum of square deviations: 8797783560.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,324 | INFO     | sum of deviations: -33673039073.999996
[2025-05-27 13:57:06] 2025-05-27 11:40:54,324 | INFO     | mean x: 1748336345.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,325 | INFO     | mean y: 2525200.275409836
[2025-05-27 13:57:06] 2025-05-27 11:40:54,325 | INFO     | -- intersect: 6694187669.37113
[2025-05-27 13:57:06] 2025-05-27 11:40:54,325 | INFO     | intersect: 6694187669.37113
[2025-05-27 13:57:06] 2025-05-27 11:40:54,325 | INFO     | chi2: 1.8077386737901868
[2025-05-27 13:57:06] 2025-05-27 11:40:54,325 | INFO     | current chi2=1.8077386737901868 (change=29.91612822045645 %)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,326 | INFO     | sum of square deviations: 8372156975.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,329 | INFO     | sum of deviations: -32999266349.5
[2025-05-27 13:57:06] 2025-05-27 11:40:54,329 | INFO     | mean x: 1748336192.5
[2025-05-27 13:57:06] 2025-05-27 11:40:54,329 | INFO     | mean y: 2525441.696666667
[2025-05-27 13:57:06] 2025-05-27 11:40:54,330 | INFO     | -- intersect: 6893678086.95368
[2025-05-27 13:57:06] 2025-05-27 11:40:54,330 | INFO     | intersect: 6893678086.95368
[2025-05-27 13:57:06] 2025-05-27 11:40:54,330 | INFO     | chi2: 1.8064806076202988
[2025-05-27 13:57:06] 2025-05-27 11:40:54,330 | INFO     | current chi2=1.8064806076202988 (change=0.06959336480036 %)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,331 | INFO     | right removable region: 299
[2025-05-27 13:57:06] 2025-05-27 11:40:54,331 | INFO     | sum of square deviations: 8797783560.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,334 | INFO     | sum of deviations: -104172383877.99995
[2025-05-27 13:57:06] 2025-05-27 11:40:54,334 | INFO     | mean x: 1748336650.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,335 | INFO     | mean y: 2534641.2557377047
[2025-05-27 13:57:06] 2025-05-27 11:40:54,335 | INFO     | -- intersect: 20704157431.777813
[2025-05-27 13:57:06] 2025-05-27 11:40:54,335 | INFO     | intersect: 20704157431.777813
[2025-05-27 13:57:06] 2025-05-27 11:40:54,335 | INFO     | chi2: 1.0907835279988287
[2025-05-27 13:57:06] 2025-05-27 11:40:54,335 | INFO     | current chi2=1.0907835279988287 (change=57.71162390677452 %)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,336 | INFO     | sum of square deviations: 8372156975.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,341 | INFO     | sum of deviations: -102038059209.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,341 | INFO     | mean x: 1748336802.5
[2025-05-27 13:57:06] 2025-05-27 11:40:54,341 | INFO     | mean y: 2533857.3666666667
[2025-05-27 13:57:06] 2025-05-27 11:40:54,342 | INFO     | -- intersect: 21310889004.490353
[2025-05-27 13:57:06] 2025-05-27 11:40:54,342 | INFO     | intersect: 21310889004.490353
[2025-05-27 13:57:06] 2025-05-27 11:40:54,342 | INFO     | chi2: 1.074974357671254
[2025-05-27 13:57:06] 2025-05-27 11:40:54,342 | INFO     | current chi2=1.074974357671254 (change=1.4493407648517083 %)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,342 | INFO     | left removable region: 20
[2025-05-27 13:57:06] 2025-05-27 11:40:54,343 | INFO     | sum of square deviations: 6734191380.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,346 | INFO     | sum of deviations: -61367703363.99999
[2025-05-27 13:57:06] 2025-05-27 11:40:54,346 | INFO     | mean x: 1748336772.0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,346 | INFO     | mean y: 2535357.4838709678
[2025-05-27 13:57:06] 2025-05-27 11:40:54,346 | INFO     | -- intersect: 15934873235.958199
[2025-05-27 13:57:06] 2025-05-27 11:40:54,346 | INFO     | intersect: 15934873235.958199
[2025-05-27 13:57:06] 2025-05-27 11:40:54,347 | INFO     | chi2: 0.2638341251094585
[2025-05-27 13:57:06] 2025-05-27 11:40:54,347 | INFO     | -- intersect: 15934873235.958199
[2025-05-27 13:57:06] 2025-05-27 11:40:54,347 | INFO     | current memory leak: -9.11 B/s (using 279 data points, chi2=0.26)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,348 | INFO     | ..............................
[2025-05-27 13:57:06] 2025-05-27 11:40:54,348 | INFO     | . Timing measurements:
[2025-05-27 13:57:06] 2025-05-27 11:40:54,348 | INFO     | . get job = 0 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,348 | INFO     | . initial setup = 3 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,348 | INFO     | . payload setup = 13 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,348 | INFO     | . stage-in = 0 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,348 | INFO     | . payload execution = 18908 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,349 | INFO     | . stage-out = 3 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,349 | INFO     | . log creation = 1 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,349 | INFO     | ..............................
[2025-05-27 13:57:06] 2025-05-27 11:40:54,499 | INFO     | 
[2025-05-27 13:57:06] 2025-05-27 11:40:54,499 | INFO     | job summary report
[2025-05-27 13:57:06] 2025-05-27 11:40:54,499 | INFO     | --------------------------------------------------
[2025-05-27 13:57:06] 2025-05-27 11:40:54,499 | INFO     | PanDA job id: 6665894860
[2025-05-27 13:57:06] 2025-05-27 11:40:54,499 | INFO     | task id: 44871837
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | errors: (none)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | pilot state: finished 
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | transexitcode: 0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | exeerrorcode: 0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | exeerrordiag: 
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | exitcode: 0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | exitmsg: OK
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | cpuconsumptiontime: 72606 s
[2025-05-27 13:57:06] 2025-05-27 11:40:54,500 | INFO     | nevents: 400
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | neventsw: 0
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | pid: 16491
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | pgrp: 16491
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | corecount: 8
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | event service: False
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | sizes: {0: 2405234, 1: 2405234, 12: 2405496, 22: 2405496, 18926: 2437359, 18930: 2446300, 18932: 2446484, 19017: 2446654}
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | --------------------------------------------------
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | 
[2025-05-27 13:57:06] 2025-05-27 11:40:54,501 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-27 13:57:06] 2025-05-27 11:40:54,777 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 13:57:06] 2025-05-27 11:40:54,780 | INFO     | job 6665894860 has completed (purged errors)
[2025-05-27 13:57:06] 2025-05-27 11:40:54,780 | INFO     | overall cleanup function is called
[2025-05-27 13:57:06] 2025-05-27 11:40:55,788 | INFO     | --- collectZombieJob: --- 10, [16491]
[2025-05-27 13:57:06] 2025-05-27 11:40:55,788 | INFO     | zombie collector waiting for pid 16491
[2025-05-27 13:57:06] 2025-05-27 11:40:55,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 13:57:06] 2025-05-27 11:40:55,788 | INFO     | collected zombie processes
[2025-05-27 13:57:06] 2025-05-27 11:40:55,789 | INFO     | will attempt to kill all subprocesses of pid=16491
[2025-05-27 13:57:06] 2025-05-27 11:40:55,901 | INFO     | process IDs to be killed: [16491] (in reverse order)
[2025-05-27 13:57:06] 2025-05-27 11:40:56,631 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 13:57:06] 2025-05-27 11:40:56,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 13:57:06] 2025-05-27 11:40:56,635 | INFO     | did not find any defunct processes belonging to 16491
[2025-05-27 13:57:06] 2025-05-27 11:40:56,638 | INFO     | did not find any defunct processes belonging to 16491
[2025-05-27 13:57:06] 2025-05-27 11:40:56,638 | INFO     | ready for new job
[2025-05-27 13:57:06] 2025-05-27 11:40:56,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 13:57:06] 2025-05-27 11:40:56,640 | INFO     | **************************************
[2025-05-27 13:57:06] 2025-05-27 11:40:56,640 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 13:57:06] 2025-05-27 11:40:56,641 | INFO     | **************************************
[2025-05-27 13:57:06] 2025-05-27 11:40:56,641 | INFO     | 
[2025-05-27 13:57:06] 2025-05-27 11:40:56,641 | INFO     | pilot is running in a VM
[2025-05-27 13:57:06] 2025-05-27 11:40:56,641 | INFO     | architecture information:
[2025-05-27 13:57:06] 2025-05-27 11:40:56,646 | INFO     | executing command: cat /etc/os-release
[2025-05-27 13:57:06] 2025-05-27 11:40:56,747 | INFO     | cat /etc/os-release:
[2025-05-27 13:57:06] NAME="CentOS Linux"
[2025-05-27 13:57:06] VERSION="7 (Core)"
[2025-05-27 13:57:06] ID="centos"
[2025-05-27 13:57:06] ID_LIKE="rhel fedora"
[2025-05-27 13:57:06] VERSION_ID="7"
[2025-05-27 13:57:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 13:57:06] ANSI_COLOR="0;31"
[2025-05-27 13:57:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 13:57:06] HOME_URL="https://www.centos.org/"
[2025-05-27 13:57:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 13:57:06] 
[2025-05-27 13:57:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 13:57:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 13:57:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 13:57:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 13:57:06] 
[2025-05-27 13:57:06] 2025-05-27 11:40:56,748 | INFO     | **************************************
[2025-05-27 13:57:06] 2025-05-27 11:40:57,251 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-27 13:57:06] 2025-05-27 11:40:57,472 | INFO     | sufficient remaining disk space (496405315584 B)
[2025-05-27 13:57:06] 2025-05-27 11:40:57,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 13:57:06] 2025-05-27 11:40:57,472 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 13:57:06] 2025-05-27 11:40:57,473 | INFO     | update_server=False
[2025-05-27 13:57:06] 2025-05-27 11:40:57,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 13:57:06] 2025-05-27 11:40:57,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 13:57:06] 2025-05-27 11:40:57,474 | INFO     | aborting loop
[2025-05-27 13:57:06] 2025-05-27 11:40:57,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 13:57:06] 2025-05-27 11:40:58,017 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 13:57:06] 2025-05-27 11:40:58,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 13:57:06] 2025-05-27 11:40:58,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 13:57:06] 2025-05-27 11:40:58,458 | INFO     | all payload control threads have been joined
[2025-05-27 13:57:06] 2025-05-27 11:40:58,479 | INFO     | [job] retrieve thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:58,480 | INFO     | [job] job monitor thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:58,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 13:57:06] 2025-05-27 11:40:58,530 | INFO     | all job control threads have been joined
[2025-05-27 13:57:06] 2025-05-27 11:40:58,538 | INFO     | all data control threads have been joined
[2025-05-27 13:57:06] 2025-05-27 11:40:58,950 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,187 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,379 | INFO     | [data] copytool_in thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,453 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,464 | INFO     | [payload] control thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 13:57:06] 2025-05-27 11:40:59,536 | INFO     | [job] control thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,543 | INFO     | [data] control thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,685 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,800 | INFO     | [job] validate thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:40:59,977 | INFO     | [payload] failed_post thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:41:00,061 | INFO     | [payload] validate_post thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:41:00,509 | INFO     | [data] copytool_out thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:41:00,518 | INFO     | [job] queue monitor thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:41:01,486 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 13:57:06] 2025-05-27 11:41:01,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194482595648)>', '<ExcThread(monitor, started 140193906554624)>']
[2025-05-27 13:57:06] 2025-05-27 11:41:02,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 13:57:06] 2025-05-27 11:41:02,041 | INFO     | [monitor] control thread has ended
[2025-05-27 13:57:06] 2025-05-27 11:41:06,909 | INFO     | all workflow threads have been joined
[2025-05-27 13:57:06] 2025-05-27 11:41:06,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 13:57:06] 2025-05-27 11:41:06,909 | INFO     | traces error code: 0
[2025-05-27 13:57:06] 2025-05-27 11:41:06,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 13:57:06] 2025-05-27 11:41:07,271 [wrapper] ==== pilot stdout END ====
[2025-05-27 13:57:06] 2025-05-27 11:41:07,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 13:57:06] 2025-05-27 11:41:07,494 [wrapper] pilotpid: 9233
[2025-05-27 13:57:06] 2025-05-27 11:41:07,549 [wrapper] Pilot exit status: 0
[2025-05-27 13:57:06] 2025-05-27 11:41:07,986 [wrapper] pandaids: 6665894860
[2025-05-27 13:57:06] 2025-05-27 11:41:08,708 [wrapper] cleanup supervisor_pilot 13651 9234
[2025-05-27 13:57:06] 2025-05-27 11:41:08,790 [wrapper] Test setup, not cleaning
[2025-05-27 13:57:06] 2025-05-27 11:41:08,886 [wrapper] apfmon messages muted
[2025-05-27 13:57:06] 2025-05-27 11:41:08,994 [wrapper] ==== wrapper stdout END ====
[2025-05-27 13:57:06] 2025-05-27 11:41:09,084 [wrapper] ==== wrapper stderr END ====
[2025-05-27 13:57:06]  *** Error codes and diagnostics ***
[2025-05-27 13:57:06]     "exeErrorCode": 0,
[2025-05-27 13:57:06]     "exeErrorDiag": "",
[2025-05-27 13:57:06]     "pilotErrorCode": 0,
[2025-05-27 13:57:06]     "pilotErrorDiag": "",
[2025-05-27 13:57:06]  *** Listing of results directory ***
[2025-05-27 13:57:06] total 425952
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc    495897 May 26 10:29 pilot3.tar.gz
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc      5111 May 26 11:01 queuedata.json
[2025-05-27 13:57:06] -rwx------. 1 boinc boinc     37140 May 26 11:02 runpilot2-wrapper.sh
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc       100 May 27 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 13:57:06] -rwxr-xr-x. 1 boinc boinc      7986 May 27 08:22 run_atlas
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc       105 May 27 08:22 job.xml
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc      6371 May 27 08:23 init_data.xml
[2025-05-27 13:57:06] -rw-r--r--. 2 boinc boinc 225410397 May 27 08:23 EVNT.44871834._001932.pool.root.1
[2025-05-27 13:57:06] -rw-r--r--. 2 boinc boinc     15093 May 27 08:23 start_atlas.sh
[2025-05-27 13:57:06] drwxrwx--x. 2 boinc boinc        68 May 27 08:23 shared
[2025-05-27 13:57:06] -rw-r--r--. 2 boinc boinc    508881 May 27 08:23 input.tar.gz
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc         0 May 27 08:23 boinc_lockfile
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc      2559 May 27 08:23 pandaJob.out
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc    990418 May 27 08:23 agis_schedconf.cvmfs.json
[2025-05-27 13:57:06] drwx------. 4 boinc boinc      4096 May 27 08:23 pilot3
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc 202823450 May 27 13:38 HITS.44871837._048477.pool.root.1
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc       531 May 27 13:38 boinc_task_state.xml
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc      1015 May 27 13:39 memory_monitor_summary.json
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc   1603667 May 27 13:39 agis_ddmendpoints.agis.ALL.json
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc    431348 May 27 13:39 log.44871837._048477.job.log.tgz.1
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc        95 May 27 13:40 pilot_heartbeat.json
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc      7689 May 27 13:40 heartbeat.json
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc      4416 May 27 13:41 pilotlog.txt
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc   1627435 May 27 13:41 log.44871837._048477.job.log.1
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc       357 May 27 13:41 output.list
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc       620 May 27 13:41 runtime_log
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc   2078720 May 27 13:41 result.tar.gz
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc      8659 May 27 13:41 runtime_log.err
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc       657 May 27 13:41 RaPNDmFuid7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAQWKDmrZNYwm.diag
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc      8192 May 27 13:57 boinc_mmap_file
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc        28 May 27 13:57 wrapper_checkpoint.txt
[2025-05-27 13:57:06] -rw-r--r--. 1 boinc boinc     20422 May 27 13:57 stderr.txt
[2025-05-27 13:57:06] HITS file was successfully produced:
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc 202823450 May 27 13:38 shared/HITS.pool.root.1
[2025-05-27 13:57:06]  *** Contents of shared directory: ***
[2025-05-27 13:57:06] total 420748
[2025-05-27 13:57:06] -rw-r--r--. 2 boinc boinc 225410397 May 27 08:23 ATLAS.root_0
[2025-05-27 13:57:06] -rw-r--r--. 2 boinc boinc     15093 May 27 08:23 start_atlas.sh
[2025-05-27 13:57:06] -rw-r--r--. 2 boinc boinc    508881 May 27 08:23 input.tar.gz
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc 202823450 May 27 13:38 HITS.pool.root.1
[2025-05-27 13:57:06] -rw-------. 1 boinc boinc   2078720 May 27 13:41 result.tar.gz
13:57:08 (2275): run_atlas exited; CPU time 72861.823133
13:57:08 (2275): called boinc_finish(0)

</stderr_txt>
]]>

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