Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:18:57 (12294): wrapper (7.7.26015): starting
16:18:57 (12294): wrapper: running run_atlas (--nthreads 12)
[2025-05-26 16:18:57] Arguments: --nthreads 12
[2025-05-26 16:18:57] Threads: 12
[2025-05-26 16:18:57] Checking for CVMFS
[2025-05-26 16:18:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 16:18:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 16:18:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 16:18:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 16:18:57] 2.11.2.0 2937 23192 83864 146455 2 55 12942337 20275201 1 130560 0 8787123 99.976 4526373 7187 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-26 16:18:57] CVMFS is ok
[2025-05-26 16:18:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 16:18:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 16:18:57] Further information can be found at the LHC@home message board.
[2025-05-26 16:18:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 16:18:57] Checking for apptainer binary...
[2025-05-26 16:18:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 16:18:57] Running /usr/bin/apptainer --version
[2025-05-26 16:18:57] apptainer version 1.3.2-1.el7
[2025-05-26 16:18:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 16:18:59] c-205-8.aglt2.org
[2025-05-26 16:18:59] apptainer works
[2025-05-26 16:18:59] Set ATHENA_PROC_NUMBER=12
[2025-05-26 16:18:59] Set ATHENA_CORE_NUMBER=12
[2025-05-26 16:18:59] Starting ATLAS job with PandaID=6665731893
[2025-05-26 16:18:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 17:49:37]  *** The last 200 lines of the pilot log: ***
[2025-05-26 17:49:37]  guid=fecff6a9-5327-4b39-ace6-48d3e003fc26
[2025-05-26 17:49:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-26 17:49:37]  is_altstaged=None
[2025-05-26 17:49:37]  is_tar=False
[2025-05-26 17:49:37]  lfn=log.44871837._036133.job.log.tgz.1
[2025-05-26 17:49:37]  mtime=0
[2025-05-26 17:49:37]  protocol_id=None
[2025-05-26 17:49:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-26 17:49:37]  replicas=None
[2025-05-26 17:49:37]  scope=mc23_13p6TeV
[2025-05-26 17:49:37]  status=None
[2025-05-26 17:49:37]  status_code=0
[2025-05-26 17:49:37]  storage_token=
[2025-05-26 17:49:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665731893/log.44871837._036133.job.log.tgz.1
[2025-05-26 17:49:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/f8/log.44871837._036133.job.log.tgz.1
[2025-05-26 17:49:37]  workdir=None
[2025-05-26 17:49:37] ]
[2025-05-26 17:49:37] 2025-05-26 21:49:16,470 | INFO     | transferring file log.44871837._036133.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665731893/log.44871837._036133.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-26 17:49:37] 2025-05-26 21:49:16,470 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665731893/log.44871837._036133.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._036133.job
[2025-05-26 17:49:37] 2025-05-26 21:49:16,493 | INFO     | adding to output.list: log.44871837._036133.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/f8/log.44871837._036133.job.log.tg
[2025-05-26 17:49:37] 2025-05-26 21:49:16,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-26 17:49:37] 2025-05-26 21:49:16,494 | INFO     | summary of transferred files:
[2025-05-26 17:49:37] 2025-05-26 21:49:16,494 | INFO     |  -- lfn=log.44871837._036133.job.log.tgz.1, status_code=0, status=transferred
[2025-05-26 17:49:37] 2025-05-26 21:49:16,494 | INFO     | stage-out finished correctly
[2025-05-26 17:49:37] 2025-05-26 21:49:17,665 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-26 17:49:37] 2025-05-26 21:49:17,750 | INFO     | job 6665731893 has state=finished
[2025-05-26 17:49:37] 2025-05-26 21:49:17,751 | INFO     | preparing for final server update for job 6665731893 in state='finished'
[2025-05-26 17:49:37] 2025-05-26 21:49:17,751 | INFO     | this job has now completed (state=finished)
[2025-05-26 17:49:37] 2025-05-26 21:49:17,751 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-26 17:49:37] 2025-05-26 21:49:17,752 | INFO     | log transfer has been attempted: DONE
[2025-05-26 17:49:37] 2025-05-26 21:49:17,752 | INFO     | job 6665731893 has finished - writing final server update
[2025-05-26 17:49:37] 2025-05-26 21:49:17,752 | INFO     | total number of processed events: 400 (read)
[2025-05-26 17:49:37] 2025-05-26 21:49:17,754 | INFO     | executing command: lscpu
[2025-05-26 17:49:37] 2025-05-26 21:49:17,782 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 17:49:37] 2025-05-26 21:49:18,179 | INFO     | monitor loop #404: job 0:6665731893 is in state 'finished'
[2025-05-26 17:49:37] 2025-05-26 21:49:18,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 17:49:37] 2025-05-26 21:49:20,682 | INFO     | monitor loop #405: job 0:6665731893 is in state 'finished'
[2025-05-26 17:49:37] 2025-05-26 21:49:20,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 17:49:37] 2025-05-26 21:49:23,189 | INFO     | monitor loop #406: job 0:6665731893 is in state 'finished'
[2025-05-26 17:49:37] 2025-05-26 21:49:23,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 17:49:37] 2025-05-26 21:49:24,246 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-26 17:49:37] 2025-05-26 21:49:24,247 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665731893/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 17:49:37] 2025-05-26 21:49:24,248 | INFO     | extracted standard info from prmon json
[2025-05-26 17:49:37] 2025-05-26 21:49:24,248 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 17:49:37] 2025-05-26 21:49:24,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 17:49:37] 2025-05-26 21:49:24,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 17:49:37] 2025-05-26 21:49:24,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 17:49:37] 2025-05-26 21:49:24,251 | INFO     | fitting pss+swap vs Time
[2025-05-26 17:49:37] 2025-05-26 21:49:24,251 | INFO     | sum of square deviations: 170944600.5
[2025-05-26 17:49:37] 2025-05-26 21:49:24,251 | INFO     | sum of deviations: -11858692067.999998
[2025-05-26 17:49:37] 2025-05-26 21:49:24,251 | INFO     | mean x: 1748293558.5
[2025-05-26 17:49:37] 2025-05-26 21:49:24,251 | INFO     | mean y: 2866492.2682926827
[2025-05-26 17:49:37] 2025-05-26 21:49:24,252 | INFO     | -- intersect: 121284702210.26419
[2025-05-26 17:49:37] 2025-05-26 21:49:24,252 | INFO     | intersect: 121284702210.26419
[2025-05-26 17:49:37] 2025-05-26 21:49:24,252 | INFO     | chi2: 0.07354814279252549
[2025-05-26 17:49:37] 2025-05-26 21:49:24,252 | INFO     | -- intersect: 121284702210.26419
[2025-05-26 17:49:37] 2025-05-26 21:49:24,252 | INFO     | current memory leak: -69.37 B/s (using 82 data points, chi2=0.07)
[2025-05-26 17:49:37] 2025-05-26 21:49:24,252 | INFO     | ..............................
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . Timing measurements:
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . get job = 0 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . initial setup = 2 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . payload setup = 9 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . stage-in = 0 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . payload execution = 5373 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . stage-out = 0 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | . log creation = 0 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,253 | INFO     | ..............................
[2025-05-26 17:49:37] 2025-05-26 21:49:24,337 | INFO     | 
[2025-05-26 17:49:37] 2025-05-26 21:49:24,337 | INFO     | job summary report
[2025-05-26 17:49:37] 2025-05-26 21:49:24,337 | INFO     | --------------------------------------------------
[2025-05-26 17:49:37] 2025-05-26 21:49:24,338 | INFO     | PanDA job id: 6665731893
[2025-05-26 17:49:37] 2025-05-26 21:49:24,338 | INFO     | task id: 44871837
[2025-05-26 17:49:37] 2025-05-26 21:49:24,338 | INFO     | errors: (none)
[2025-05-26 17:49:37] 2025-05-26 21:49:24,338 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 17:49:37] 2025-05-26 21:49:24,338 | INFO     | pilot state: finished 
[2025-05-26 17:49:37] 2025-05-26 21:49:24,338 | INFO     | transexitcode: 0
[2025-05-26 17:49:37] 2025-05-26 21:49:24,339 | INFO     | exeerrorcode: 0
[2025-05-26 17:49:37] 2025-05-26 21:49:24,339 | INFO     | exeerrordiag: 
[2025-05-26 17:49:37] 2025-05-26 21:49:24,339 | INFO     | exitcode: 0
[2025-05-26 17:49:37] 2025-05-26 21:49:24,339 | INFO     | exitmsg: OK
[2025-05-26 17:49:37] 2025-05-26 21:49:24,339 | INFO     | cpuconsumptiontime: 59880 s
[2025-05-26 17:49:37] 2025-05-26 21:49:24,339 | INFO     | nevents: 400
[2025-05-26 17:49:37] 2025-05-26 21:49:24,340 | INFO     | neventsw: 0
[2025-05-26 17:49:37] 2025-05-26 21:49:24,340 | INFO     | pid: 22352
[2025-05-26 17:49:37] 2025-05-26 21:49:24,340 | INFO     | pgrp: 22352
[2025-05-26 17:49:37] 2025-05-26 21:49:24,340 | INFO     | corecount: 12
[2025-05-26 17:49:37] 2025-05-26 21:49:24,340 | INFO     | event service: False
[2025-05-26 17:49:37] 2025-05-26 21:49:24,340 | INFO     | sizes: {0: 2405234, 5: 2405440, 11: 2405496, 5387: 2431883, 5389: 2440824, 5390: 2440880, 5396: 2441178}
[2025-05-26 17:49:37] 2025-05-26 21:49:24,341 | INFO     | --------------------------------------------------
[2025-05-26 17:49:37] 2025-05-26 21:49:24,341 | INFO     | 
[2025-05-26 17:49:37] 2025-05-26 21:49:24,341 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-26 17:49:37] 2025-05-26 21:49:24,365 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,365 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,366 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,366 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,368 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 17:49:37] 2025-05-26 21:49:24,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 17:49:37] 2025-05-26 21:49:24,369 | INFO     | job 6665731893 has completed (purged errors)
[2025-05-26 17:49:37] 2025-05-26 21:49:24,369 | INFO     | overall cleanup function is called
[2025-05-26 17:49:37] 2025-05-26 21:49:25,376 | INFO     | --- collectZombieJob: --- 10, [22352]
[2025-05-26 17:49:37] 2025-05-26 21:49:25,377 | INFO     | zombie collector waiting for pid 22352
[2025-05-26 17:49:37] 2025-05-26 21:49:25,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 17:49:37] 2025-05-26 21:49:25,377 | INFO     | collected zombie processes
[2025-05-26 17:49:37] 2025-05-26 21:49:25,377 | INFO     | will attempt to kill all subprocesses of pid=22352
[2025-05-26 17:49:37] 2025-05-26 21:49:25,468 | INFO     | process IDs to be killed: [22352] (in reverse order)
[2025-05-26 17:49:37] 2025-05-26 21:49:25,518 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 17:49:37] 2025-05-26 21:49:25,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 17:49:37] 2025-05-26 21:49:25,522 | INFO     | did not find any defunct processes belonging to 22352
[2025-05-26 17:49:37] 2025-05-26 21:49:25,525 | INFO     | did not find any defunct processes belonging to 22352
[2025-05-26 17:49:37] 2025-05-26 21:49:25,525 | INFO     | ready for new job
[2025-05-26 17:49:37] 2025-05-26 21:49:25,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 17:49:37] 2025-05-26 21:49:25,527 | INFO     | **************************************
[2025-05-26 17:49:37] 2025-05-26 21:49:25,527 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 17:49:37] 2025-05-26 21:49:25,527 | INFO     | **************************************
[2025-05-26 17:49:37] 2025-05-26 21:49:25,527 | INFO     | 
[2025-05-26 17:49:37] 2025-05-26 21:49:25,528 | INFO     | architecture information:
[2025-05-26 17:49:37] 2025-05-26 21:49:25,529 | INFO     | executing command: cat /etc/os-release
[2025-05-26 17:49:37] 2025-05-26 21:49:25,541 | INFO     | cat /etc/os-release:
[2025-05-26 17:49:37] NAME="CentOS Linux"
[2025-05-26 17:49:37] VERSION="7 (Core)"
[2025-05-26 17:49:37] ID="centos"
[2025-05-26 17:49:37] ID_LIKE="rhel fedora"
[2025-05-26 17:49:37] VERSION_ID="7"
[2025-05-26 17:49:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 17:49:37] ANSI_COLOR="0;31"
[2025-05-26 17:49:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 17:49:37] HOME_URL="https://www.centos.org/"
[2025-05-26 17:49:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 17:49:37] 
[2025-05-26 17:49:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 17:49:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 17:49:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 17:49:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 17:49:37] 
[2025-05-26 17:49:37] 2025-05-26 21:49:25,542 | INFO     | **************************************
[2025-05-26 17:49:37] 2025-05-26 21:49:26,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-26 17:49:37] 2025-05-26 21:49:26,063 | INFO     | sufficient remaining disk space (29385293824 B)
[2025-05-26 17:49:37] 2025-05-26 21:49:26,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 17:49:37] 2025-05-26 21:49:26,064 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 17:49:37] 2025-05-26 21:49:26,064 | INFO     | update_server=False
[2025-05-26 17:49:37] 2025-05-26 21:49:26,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 17:49:37] 2025-05-26 21:49:26,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 17:49:37] 2025-05-26 21:49:26,065 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 17:49:37] 2025-05-26 21:49:26,065 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 17:49:37] 2025-05-26 21:49:26,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 17:49:37] 2025-05-26 21:49:26,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 17:49:37] 2025-05-26 21:49:26,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 17:49:37] 2025-05-26 21:49:26,697 | INFO     | aborting loop
[2025-05-26 17:49:37] 2025-05-26 21:49:26,723 | INFO     | all payload control threads have been joined
[2025-05-26 17:49:37] 2025-05-26 21:49:26,793 | INFO     | all job control threads have been joined
[2025-05-26 17:49:37] 2025-05-26 21:49:26,796 | INFO     | all data control threads have been joined
[2025-05-26 17:49:37] 2025-05-26 21:49:27,069 | INFO     | [job] retrieve thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,070 | INFO     | [job] queue monitor thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 17:49:37] 2025-05-26 21:49:27,160 | INFO     | [data] copytool_in thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,204 | INFO     | [payload] validate_post thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,657 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,703 | INFO     | [job] job monitor thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,729 | INFO     | [payload] control thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,799 | INFO     | [job] control thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,801 | INFO     | [data] control thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:27,880 | INFO     | [job] validate thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:28,246 | INFO     | [payload] failed_post thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:28,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 17:49:37] 2025-05-26 21:49:28,356 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:28,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:28,365 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:29,099 | INFO     | [data] copytool_out thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:32,265 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 17:49:37] 2025-05-26 21:49:32,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140397190969152)>', '<ExcThread(monitor, started 140396155885312)>']
[2025-05-26 17:49:37] 2025-05-26 21:49:33,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 17:49:37] 2025-05-26 21:49:33,101 | INFO     | [monitor] control thread has ended
[2025-05-26 17:49:37] 2025-05-26 21:49:37,431 | INFO     | all workflow threads have been joined
[2025-05-26 17:49:37] 2025-05-26 21:49:37,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 17:49:37] 2025-05-26 21:49:37,431 | INFO     | traces error code: 0
[2025-05-26 17:49:37] 2025-05-26 21:49:37,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 17:49:37] 2025-05-26 21:49:37,519 [wrapper] ==== pilot stdout END ====
[2025-05-26 17:49:37] 2025-05-26 21:49:37,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 17:49:37] 2025-05-26 21:49:37,527 [wrapper] pilotpid: 15933
[2025-05-26 17:49:37] 2025-05-26 21:49:37,530 [wrapper] Pilot exit status: 0
[2025-05-26 17:49:37] 2025-05-26 21:49:37,546 [wrapper] pandaids: 6665731893
[2025-05-26 17:49:37] 2025-05-26 21:49:37,586 [wrapper] cleanup supervisor_pilot  8237 15934
[2025-05-26 17:49:37] 2025-05-26 21:49:37,590 [wrapper] Test setup, not cleaning
[2025-05-26 17:49:37] 2025-05-26 21:49:37,594 [wrapper] apfmon messages muted
[2025-05-26 17:49:37] 2025-05-26 21:49:37,597 [wrapper] ==== wrapper stdout END ====
[2025-05-26 17:49:37] 2025-05-26 21:49:37,601 [wrapper] ==== wrapper stderr END ====
[2025-05-26 17:49:37]  *** Error codes and diagnostics ***
[2025-05-26 17:49:37]     "exeErrorCode": 0,
[2025-05-26 17:49:37]     "exeErrorDiag": "",
[2025-05-26 17:49:37]     "pilotErrorCode": 0,
[2025-05-26 17:49:37]     "pilotErrorDiag": "",
[2025-05-26 17:49:37]  *** Listing of results directory ***
[2025-05-26 17:49:37] total 414160
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas      5111 May 25 10:37 queuedata.json
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas    495897 May 25 10:38 pilot3.tar.gz
[2025-05-26 17:49:37] -rwx------ 1 boincer umatlas     37140 May 25 10:38 runpilot2-wrapper.sh
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas       100 May 26 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 17:49:37] -rwxr-xr-x 1 boincer umatlas      7986 May 26 16:18 run_atlas
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas       105 May 26 16:18 job.xml
[2025-05-26 17:49:37] -rw-r--r-- 2 boincer umatlas 226212117 May 26 16:18 EVNT.44871834._001441.pool.root.1
[2025-05-26 17:49:37] -rw-r--r-- 2 boincer umatlas     15093 May 26 16:18 start_atlas.sh
[2025-05-26 17:49:37] drwxrwx--x 2 boincer umatlas      4096 May 26 16:18 shared
[2025-05-26 17:49:37] -rw-r--r-- 2 boincer umatlas    508877 May 26 16:18 input.tar.gz
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas         0 May 26 16:18 boinc_lockfile
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas      2559 May 26 16:18 pandaJob.out
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas    990402 May 26 16:19 agis_schedconf.cvmfs.json
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas   1603667 May 26 16:19 agis_ddmendpoints.agis.ALL.json
[2025-05-26 17:49:37] drwx------ 4 boincer umatlas      4096 May 26 16:19 pilot3
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas      5867 May 26 17:48 init_data.xml
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas 192304996 May 26 17:48 HITS.44871837._036133.pool.root.1
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas       529 May 26 17:49 boinc_task_state.xml
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas      1048 May 26 17:49 memory_monitor_summary.json
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas    368764 May 26 17:49 log.44871837._036133.job.log.tgz.1
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas        95 May 26 17:49 pilot_heartbeat.json
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas      7751 May 26 17:49 heartbeat.json
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas        27 May 26 17:49 wrapper_checkpoint.txt
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas      8192 May 26 17:49 boinc_mmap_file
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas      4476 May 26 17:49 pilotlog.txt
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas    507720 May 26 17:49 log.44871837._036133.job.log.1
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas       357 May 26 17:49 output.list
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas       620 May 26 17:49 runtime_log
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas    890880 May 26 17:49 result.tar.gz
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas       658 May 26 17:49 z2vLDm4fRd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNQUKDmI3LeNn.diag
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas      8656 May 26 17:49 runtime_log.err
[2025-05-26 17:49:37] -rw-r--r-- 1 boincer umatlas     21306 May 26 17:49 stderr.txt
[2025-05-26 17:49:37] HITS file was successfully produced:
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas 192304996 May 26 17:48 shared/HITS.pool.root.1
[2025-05-26 17:49:37]  *** Contents of shared directory: ***
[2025-05-26 17:49:37] total 410100
[2025-05-26 17:49:37] -rw-r--r-- 2 boincer umatlas 226212117 May 26 16:18 ATLAS.root_0
[2025-05-26 17:49:37] -rw-r--r-- 2 boincer umatlas     15093 May 26 16:18 start_atlas.sh
[2025-05-26 17:49:37] -rw-r--r-- 2 boincer umatlas    508877 May 26 16:18 input.tar.gz
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas 192304996 May 26 17:48 HITS.pool.root.1
[2025-05-26 17:49:37] -rw------- 1 boincer umatlas    890880 May 26 17:49 result.tar.gz
17:49:39 (12294): run_atlas exited; CPU time 59869.733627
17:49:39 (12294): called boinc_finish(0)

</stderr_txt>
]]>

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