Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:23:18 (11606): wrapper (7.7.26015): starting
17:23:18 (11606): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 17:23:18] Arguments: --nthreads 8
[2025-05-27 17:23:18] Threads: 8
[2025-05-27 17:23:18] Checking for CVMFS
[2025-05-27 17:23:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 17:23:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 17:23:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 17:23:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 17:23:21] 2.11.2.0 3063 21881 93104 146485 2 16 13742674 25165824 4629 130560 0 12572752 99.781 13933877 1682 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 17:23:21] CVMFS is ok
[2025-05-27 17:23:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 17:23:21] Checking for apptainer binary...
[2025-05-27 17:23:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 17:23:21] Running /usr/bin/apptainer --version
[2025-05-27 17:23:21] apptainer version 1.3.2-1.el7
[2025-05-27 17:23:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 18:51:38] cg-vwn462.simple-grid.lan
[2025-05-27 18:51:38] apptainer works
[2025-05-27 18:51:39] Set ATHENA_PROC_NUMBER=8
[2025-05-27 18:51:39] Set ATHENA_CORE_NUMBER=8
[2025-05-27 18:51:39] Starting ATLAS job with PandaID=6665731848
[2025-05-27 18:51:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 00:58:58]  *** The last 200 lines of the pilot log: ***
[2025-05-28 00:58:58] 2025-05-27 21:31:23,366 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-6665731848/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,366 | INFO     | extracted standard info from prmon json
[2025-05-28 00:58:58] 2025-05-27 21:31:23,367 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 00:58:58] 2025-05-27 21:31:23,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 00:58:58] 2025-05-27 21:31:23,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 00:58:58] 2025-05-27 21:31:23,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 00:58:58] 2025-05-27 21:31:23,372 | INFO     | fitting pss+swap vs Time
[2025-05-28 00:58:58] 2025-05-27 21:31:23,373 | INFO     | sum of square deviations: 6309000152.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,375 | INFO     | sum of deviations: 2992401360.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,375 | INFO     | mean x: 1748373068.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,375 | INFO     | mean y: 2481890.717948718
[2025-05-28 00:58:58] 2025-05-27 21:31:23,376 | INFO     | -- intersect: -826783257.5499654
[2025-05-28 00:58:58] 2025-05-27 21:31:23,376 | INFO     | intersect: -826783257.5499654
[2025-05-28 00:58:58] 2025-05-27 21:31:23,376 | INFO     | chi2: 2.336378009293339
[2025-05-28 00:58:58] 2025-05-27 21:31:23,377 | INFO     | sum of square deviations: 5968658887.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,379 | INFO     | sum of deviations: 20715527044.000015
[2025-05-28 00:58:58] 2025-05-27 21:31:23,379 | INFO     | mean x: 1748372915.5
[2025-05-28 00:58:58] 2025-05-27 21:31:23,379 | INFO     | mean y: 2489711.925373134
[2025-05-28 00:58:58] 2025-05-27 21:31:23,380 | INFO     | -- intersect: -6065618233.215001
[2025-05-28 00:58:58] 2025-05-27 21:31:23,380 | INFO     | intersect: -6065618233.215001
[2025-05-28 00:58:58] 2025-05-27 21:31:23,380 | INFO     | chi2: 1.5657959115791884
[2025-05-28 00:58:58] 2025-05-27 21:31:23,380 | INFO     | current chi2=1.5657959115791884 (change=32.981910232378056 %)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,381 | INFO     | sum of square deviations: 5640782972.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,387 | INFO     | sum of deviations: 20093997555.999977
[2025-05-28 00:58:58] 2025-05-27 21:31:23,387 | INFO     | mean x: 1748372763.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,387 | INFO     | mean y: 2489422.9011406843
[2025-05-28 00:58:58] 2025-05-27 21:31:23,388 | INFO     | -- intersect: -6225688154.766339
[2025-05-28 00:58:58] 2025-05-27 21:31:23,388 | INFO     | intersect: -6225688154.766339
[2025-05-28 00:58:58] 2025-05-27 21:31:23,388 | INFO     | chi2: 1.5662599139888254
[2025-05-28 00:58:58] 2025-05-27 21:31:23,388 | INFO     | current chi2=1.5662599139888254 (change=-0.029633645496556654 %)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,388 | INFO     | right removable region: 262
[2025-05-28 00:58:58] 2025-05-27 21:31:23,389 | INFO     | sum of square deviations: 5968658887.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,391 | INFO     | sum of deviations: -37171314654.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,392 | INFO     | mean x: 1748373220.5
[2025-05-28 00:58:58] 2025-05-27 21:31:23,392 | INFO     | mean y: 2499726.9850746267
[2025-05-28 00:58:58] 2025-05-27 21:31:23,392 | INFO     | -- intersect: 10890930837.26052
[2025-05-28 00:58:58] 2025-05-27 21:31:23,392 | INFO     | intersect: 10890930837.26052
[2025-05-28 00:58:58] 2025-05-27 21:31:23,392 | INFO     | chi2: 0.914723290533781
[2025-05-28 00:58:58] 2025-05-27 21:31:23,392 | INFO     | current chi2=0.914723290533781 (change=60.84866032400089 %)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,403 | INFO     | sum of square deviations: 5640782972.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,405 | INFO     | sum of deviations: -33646654560.999992
[2025-05-28 00:58:58] 2025-05-27 21:31:23,406 | INFO     | mean x: 1748373373.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,406 | INFO     | mean y: 2498062.2813688214
[2025-05-28 00:58:58] 2025-05-27 21:31:23,406 | INFO     | -- intersect: 10431354342.870317
[2025-05-28 00:58:58] 2025-05-27 21:31:23,406 | INFO     | intersect: 10431354342.870317
[2025-05-28 00:58:58] 2025-05-27 21:31:23,406 | INFO     | chi2: 0.8975849333381208
[2025-05-28 00:58:58] 2025-05-27 21:31:23,407 | INFO     | current chi2=0.8975849333381208 (change=1.873611109831823 %)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,407 | INFO     | left removable region: 20
[2025-05-28 00:58:58] 2025-05-27 21:31:23,407 | INFO     | sum of square deviations: 4394577280.5
[2025-05-28 00:58:58] 2025-05-27 21:31:23,409 | INFO     | sum of deviations: 2333032352.0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,409 | INFO     | mean x: 1748373342.5
[2025-05-28 00:58:58] 2025-05-27 21:31:23,409 | INFO     | mean y: 2496766.380165289
[2025-05-28 00:58:58] 2025-05-27 21:31:23,409 | INFO     | -- intersect: -925695255.5297965
[2025-05-28 00:58:58] 2025-05-27 21:31:23,409 | INFO     | intersect: -925695255.5297965
[2025-05-28 00:58:58] 2025-05-27 21:31:23,410 | INFO     | chi2: 0.026524162703373138
[2025-05-28 00:58:58] 2025-05-27 21:31:23,410 | INFO     | -- intersect: -925695255.5297965
[2025-05-28 00:58:58] 2025-05-27 21:31:23,410 | INFO     | current memory leak: 0.53 B/s (using 242 data points, chi2=0.03)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,411 | INFO     | ..............................
[2025-05-28 00:58:58] 2025-05-27 21:31:23,411 | INFO     | . Timing measurements:
[2025-05-28 00:58:58] 2025-05-27 21:31:23,411 | INFO     | . get job = 0 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,411 | INFO     | . initial setup = 2 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,411 | INFO     | . payload setup = 12 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,411 | INFO     | . stage-in = 0 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,411 | INFO     | . payload execution = 16635 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,412 | INFO     | . stage-out = 2 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,412 | INFO     | . log creation = 1 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,412 | INFO     | ..............................
[2025-05-28 00:58:58] 2025-05-27 21:31:23,584 | INFO     | 
[2025-05-28 00:58:58] 2025-05-27 21:31:23,584 | INFO     | job summary report
[2025-05-28 00:58:58] 2025-05-27 21:31:23,584 | INFO     | --------------------------------------------------
[2025-05-28 00:58:58] 2025-05-27 21:31:23,584 | INFO     | PanDA job id: 6665731848
[2025-05-28 00:58:58] 2025-05-27 21:31:23,584 | INFO     | task id: 44871837
[2025-05-28 00:58:58] 2025-05-27 21:31:23,584 | INFO     | errors: (none)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | pilot state: finished 
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | transexitcode: 0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | exeerrorcode: 0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | exeerrordiag: 
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | exitcode: 0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | exitmsg: OK
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | cpuconsumptiontime: 62846 s
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | nevents: 400
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | neventsw: 0
[2025-05-28 00:58:58] 2025-05-27 21:31:23,585 | INFO     | pid: 7962
[2025-05-28 00:58:58] 2025-05-27 21:31:23,586 | INFO     | pgrp: 7962
[2025-05-28 00:58:58] 2025-05-27 21:31:23,586 | INFO     | corecount: 8
[2025-05-28 00:58:58] 2025-05-27 21:31:23,586 | INFO     | event service: False
[2025-05-28 00:58:58] 2025-05-27 21:31:23,586 | INFO     | sizes: {0: 2405235, 6: 2405441, 11: 2405469, 16651: 2436305, 16652: 2436304, 16655: 2445303, 16657: 2445487, 16745: 2445657}
[2025-05-28 00:58:58] 2025-05-27 21:31:23,586 | INFO     | --------------------------------------------------
[2025-05-28 00:58:58] 2025-05-27 21:31:23,586 | INFO     | 
[2025-05-28 00:58:58] 2025-05-27 21:31:23,586 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-05-28 00:58:58] 2025-05-27 21:31:23,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 00:58:58] 2025-05-27 21:31:23,835 | INFO     | job 6665731848 has completed (purged errors)
[2025-05-28 00:58:58] 2025-05-27 21:31:23,836 | INFO     | overall cleanup function is called
[2025-05-28 00:58:58] 2025-05-27 21:31:24,844 | INFO     | --- collectZombieJob: --- 10, [7962]
[2025-05-28 00:58:58] 2025-05-27 21:31:24,844 | INFO     | zombie collector waiting for pid 7962
[2025-05-28 00:58:58] 2025-05-27 21:31:24,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 00:58:58] 2025-05-27 21:31:24,844 | INFO     | collected zombie processes
[2025-05-28 00:58:58] 2025-05-27 21:31:24,844 | INFO     | will attempt to kill all subprocesses of pid=7962
[2025-05-28 00:58:58] 2025-05-27 21:31:24,950 | INFO     | process IDs to be killed: [7962] (in reverse order)
[2025-05-28 00:58:58] 2025-05-27 21:31:25,797 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 00:58:58] 2025-05-27 21:31:25,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 00:58:58] 2025-05-27 21:31:25,801 | INFO     | did not find any defunct processes belonging to 7962
[2025-05-28 00:58:58] 2025-05-27 21:31:25,803 | INFO     | did not find any defunct processes belonging to 7962
[2025-05-28 00:58:58] 2025-05-27 21:31:25,804 | INFO     | ready for new job
[2025-05-28 00:58:58] 2025-05-27 21:31:25,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 00:58:58] 2025-05-27 21:31:25,806 | INFO     | **************************************
[2025-05-28 00:58:58] 2025-05-27 21:31:25,806 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 00:58:58] 2025-05-27 21:31:25,806 | INFO     | **************************************
[2025-05-28 00:58:58] 2025-05-27 21:31:25,806 | INFO     | 
[2025-05-28 00:58:58] 2025-05-27 21:31:25,807 | INFO     | pilot is running in a VM
[2025-05-28 00:58:58] 2025-05-27 21:31:25,807 | INFO     | architecture information:
[2025-05-28 00:58:58] 2025-05-27 21:31:25,827 | INFO     | executing command: cat /etc/os-release
[2025-05-28 00:58:58] 2025-05-27 21:31:26,137 | INFO     | cat /etc/os-release:
[2025-05-28 00:58:58] NAME="CentOS Linux"
[2025-05-28 00:58:58] VERSION="7 (Core)"
[2025-05-28 00:58:58] ID="centos"
[2025-05-28 00:58:58] ID_LIKE="rhel fedora"
[2025-05-28 00:58:58] VERSION_ID="7"
[2025-05-28 00:58:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 00:58:58] ANSI_COLOR="0;31"
[2025-05-28 00:58:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 00:58:58] HOME_URL="https://www.centos.org/"
[2025-05-28 00:58:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 00:58:58] 
[2025-05-28 00:58:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 00:58:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 00:58:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 00:58:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 00:58:58] 
[2025-05-28 00:58:58] 2025-05-27 21:31:26,137 | INFO     | **************************************
[2025-05-28 00:58:58] 2025-05-27 21:31:26,641 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-05-28 00:58:58] 2025-05-27 21:31:26,860 | INFO     | sufficient remaining disk space (495378759680 B)
[2025-05-28 00:58:58] 2025-05-27 21:31:26,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 00:58:58] 2025-05-27 21:31:26,861 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 00:58:58] 2025-05-27 21:31:26,861 | INFO     | update_server=False
[2025-05-28 00:58:58] 2025-05-27 21:31:26,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 00:58:58] 2025-05-27 21:31:26,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 00:58:58] 2025-05-27 21:31:26,862 | INFO     | aborting loop
[2025-05-28 00:58:58] 2025-05-27 21:31:26,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 00:58:58] 2025-05-27 21:31:27,221 | INFO     | all job control threads have been joined
[2025-05-28 00:58:58] 2025-05-27 21:31:27,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 00:58:58] 2025-05-27 21:31:27,484 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 00:58:58] 2025-05-27 21:31:27,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 00:58:58] 2025-05-27 21:31:27,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 00:58:58] 2025-05-27 21:31:27,502 | INFO     | all data control threads have been joined
[2025-05-28 00:58:58] 2025-05-27 21:31:27,809 | INFO     | all payload control threads have been joined
[2025-05-28 00:58:58] 2025-05-27 21:31:27,867 | INFO     | [job] retrieve thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:27,868 | INFO     | [job] job monitor thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,157 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,226 | INFO     | [job] control thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,420 | INFO     | [data] copytool_in thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,508 | INFO     | [data] control thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 00:58:58] 2025-05-27 21:31:28,668 | INFO     | [payload] failed_post thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,766 | INFO     | [job] validate thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,815 | INFO     | [payload] control thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,870 | INFO     | [data] copytool_out thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,911 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:28,918 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:29,188 | INFO     | [payload] validate_post thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:29,615 | INFO     | [job] queue monitor thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:31,434 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 00:58:58] 2025-05-27 21:31:33,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475403360064)>', '<ExcThread(monitor, started 140474815866624)>']
[2025-05-28 00:58:58] 2025-05-27 21:31:33,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 00:58:58] 2025-05-27 21:31:33,520 | INFO     | [monitor] control thread has ended
[2025-05-28 00:58:58] 2025-05-27 21:31:38,035 | INFO     | all workflow threads have been joined
[2025-05-28 00:58:58] 2025-05-27 21:31:38,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 00:58:58] 2025-05-27 21:31:38,035 | INFO     | traces error code: 0
[2025-05-28 00:58:58] 2025-05-27 21:31:38,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 00:58:58] 2025-05-27 21:31:38,456 [wrapper] ==== pilot stdout END ====
[2025-05-28 00:58:58] 2025-05-27 21:31:38,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 00:58:58] 2025-05-27 21:31:38,567 [wrapper] pilotpid: 1340
[2025-05-28 00:58:58] 2025-05-27 21:31:38,678 [wrapper] Pilot exit status: 0
[2025-05-28 00:58:58] 2025-05-27 21:31:38,777 [wrapper] pandaids: 6665731848
[2025-05-28 00:58:58] 2025-05-27 21:31:38,891 [wrapper] cleanup supervisor_pilot  2235 1341
[2025-05-28 00:58:58] 2025-05-27 21:31:39,008 [wrapper] Test setup, not cleaning
[2025-05-28 00:58:58] 2025-05-27 21:31:39,121 [wrapper] apfmon messages muted
[2025-05-28 00:58:58] 2025-05-27 21:31:39,179 [wrapper] ==== wrapper stdout END ====
[2025-05-28 00:58:58] 2025-05-27 21:31:39,243 [wrapper] ==== wrapper stderr END ====
[2025-05-28 00:58:58]  *** Error codes and diagnostics ***
[2025-05-28 00:58:58]     "exeErrorCode": 0,
[2025-05-28 00:58:58]     "exeErrorDiag": "",
[2025-05-28 00:58:58]     "pilotErrorCode": 0,
[2025-05-28 00:58:58]     "pilotErrorDiag": "",
[2025-05-28 00:58:58]  *** Listing of results directory ***
[2025-05-28 00:58:58] total 417256
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc    495897 May 25 16:32 pilot3.tar.gz
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc      5111 May 25 16:33 queuedata.json
[2025-05-28 00:58:58] -rwx------. 1 boinc boinc     37140 May 25 16:35 runpilot2-wrapper.sh
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc       100 May 27 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 00:58:58] -rwxr-xr-x. 1 boinc boinc      7986 May 27 17:23 run_atlas
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc       105 May 27 17:23 job.xml
[2025-05-28 00:58:58] -rw-r--r--. 2 boinc boinc    508881 May 27 17:23 input.tar.gz
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc      6373 May 27 17:23 init_data.xml
[2025-05-28 00:58:58] -rw-r--r--. 2 boinc boinc 227068047 May 27 17:23 EVNT.44871834._001439.pool.root.1
[2025-05-28 00:58:58] -rw-r--r--. 2 boinc boinc     15093 May 27 17:23 start_atlas.sh
[2025-05-28 00:58:58] drwxrwx--x. 2 boinc boinc        68 May 27 17:23 shared
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc         0 May 27 17:23 boinc_lockfile
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc      2559 May 27 18:51 pandaJob.out
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc    991119 May 27 18:51 agis_schedconf.cvmfs.json
[2025-05-28 00:58:58] drwx------. 4 boinc boinc      4096 May 27 18:52 pilot3
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc 192655922 May 27 23:28 HITS.44871837._036088.pool.root.1
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc       531 May 27 23:28 boinc_task_state.xml
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc      1019 May 27 23:29 memory_monitor_summary.json
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc   1603667 May 27 23:29 agis_ddmendpoints.agis.ALL.json
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc    414880 May 27 23:29 log.44871837._036088.job.log.tgz.1
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc        95 May 27 23:30 pilot_heartbeat.json
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc      7685 May 27 23:31 heartbeat.json
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc      4417 May 27 23:31 pilotlog.txt
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc   1444691 May 27 23:31 log.44871837._036088.job.log.1
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc       357 May 27 23:31 output.list
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc       620 May 27 23:31 runtime_log
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc   1873920 May 27 23:31 result.tar.gz
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc      8673 May 27 23:31 runtime_log.err
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc       657 May 27 23:31 CXIODmmcRd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2PUKDmUaoJqn.diag
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc      8192 May 28 00:58 boinc_mmap_file
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc        28 May 28 00:58 wrapper_checkpoint.txt
[2025-05-28 00:58:58] -rw-r--r--. 1 boinc boinc     20481 May 28 00:58 stderr.txt
[2025-05-28 00:58:58] HITS file was successfully produced:
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc 192655922 May 27 23:28 shared/HITS.pool.root.1
[2025-05-28 00:58:58]  *** Contents of shared directory: ***
[2025-05-28 00:58:58] total 412240
[2025-05-28 00:58:58] -rw-r--r--. 2 boinc boinc    508881 May 27 17:23 input.tar.gz
[2025-05-28 00:58:58] -rw-r--r--. 2 boinc boinc 227068047 May 27 17:23 ATLAS.root_0
[2025-05-28 00:58:58] -rw-r--r--. 2 boinc boinc     15093 May 27 17:23 start_atlas.sh
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc 192655922 May 27 23:28 HITS.pool.root.1
[2025-05-28 00:58:58] -rw-------. 1 boinc boinc   1873920 May 27 23:31 result.tar.gz
00:59:00 (11606): run_atlas exited; CPU time 63043.172434
00:59:00 (11606): called boinc_finish(0)

</stderr_txt>
]]>

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