Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:55:04 (31958): wrapper (7.7.26015): starting
02:55:04 (31958): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 02:55:04] Arguments: --nthreads 8
[2025-05-27 02:55:04] Threads: 8
[2025-05-27 02:55:04] Checking for CVMFS
[2025-05-27 02:55:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 02:55:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 02:55:04] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 02:55:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 02:55:04] 2.11.2.0 16148 21002 92444 146462 2 120 23097202 25165824 3685 130560 0 12182080 99.760 13987654 1699 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 02:55:04] CVMFS is ok
[2025-05-27 02:55:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 02:55:04] Checking for apptainer binary...
[2025-05-27 02:55:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 02:55:04] Running /usr/bin/apptainer --version
[2025-05-27 02:55:04] apptainer version 1.3.2-1.el7
[2025-05-27 02:55:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 02:55:06] cg-vwn372.simple-grid.lan
[2025-05-27 02:55:06] apptainer works
[2025-05-27 02:55:06] Set ATHENA_PROC_NUMBER=8
[2025-05-27 02:55:06] Set ATHENA_CORE_NUMBER=8
[2025-05-27 02:55:06] Starting ATLAS job with PandaID=6665896745
[2025-05-27 02:55:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 08:35:39]  *** The last 200 lines of the pilot log: ***
[2025-05-27 08:35:39] 2025-05-27 06:10:56,991 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6665896745/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 08:35:39] 2025-05-27 06:10:56,992 | INFO     | extracted standard info from prmon json
[2025-05-27 08:35:39] 2025-05-27 06:10:56,992 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 08:35:39] 2025-05-27 06:10:56,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 08:35:39] 2025-05-27 06:10:56,992 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 08:35:39] 2025-05-27 06:10:56,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 08:35:39] 2025-05-27 06:10:56,999 | INFO     | fitting pss+swap vs Time
[2025-05-27 08:35:39] 2025-05-27 06:10:56,999 | INFO     | sum of square deviations: 9059954057.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,002 | INFO     | sum of deviations: 21760124136.499996
[2025-05-27 08:35:39] 2025-05-27 06:10:57,003 | INFO     | mean x: 1748316771.5
[2025-05-27 08:35:39] 2025-05-27 06:10:57,003 | INFO     | mean y: 2483987.775974026
[2025-05-27 08:35:39] 2025-05-27 06:10:57,003 | INFO     | -- intersect: -4196609047.179457
[2025-05-27 08:35:39] 2025-05-27 06:10:57,003 | INFO     | intersect: -4196609047.179457
[2025-05-27 08:35:39] 2025-05-27 06:10:57,003 | INFO     | chi2: 2.2836490306688018
[2025-05-27 08:35:39] 2025-05-27 06:10:57,004 | INFO     | sum of square deviations: 8625843592.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,007 | INFO     | sum of deviations: 41550519904.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,007 | INFO     | mean x: 1748316619.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,007 | INFO     | mean y: 2490845.399339934
[2025-05-27 08:35:39] 2025-05-27 06:10:57,008 | INFO     | -- intersect: -8419116119.932879
[2025-05-27 08:35:39] 2025-05-27 06:10:57,008 | INFO     | intersect: -8419116119.932879
[2025-05-27 08:35:39] 2025-05-27 06:10:57,008 | INFO     | chi2: 1.5096186509530216
[2025-05-27 08:35:39] 2025-05-27 06:10:57,008 | INFO     | current chi2=1.5096186509530216 (change=33.894454415751156 %)
[2025-05-27 08:35:39] 2025-05-27 06:10:57,009 | INFO     | sum of square deviations: 8205826414.5
[2025-05-27 08:35:39] 2025-05-27 06:10:57,012 | INFO     | sum of deviations: 40544853347.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,012 | INFO     | mean x: 1748316466.5
[2025-05-27 08:35:39] 2025-05-27 06:10:57,012 | INFO     | mean y: 2490480.234899329
[2025-05-27 08:35:39] 2025-05-27 06:10:57,012 | INFO     | -- intersect: -8635912424.94122
[2025-05-27 08:35:39] 2025-05-27 06:10:57,012 | INFO     | intersect: -8635912424.94122
[2025-05-27 08:35:39] 2025-05-27 06:10:57,013 | INFO     | chi2: 1.5100875279803965
[2025-05-27 08:35:39] 2025-05-27 06:10:57,013 | INFO     | current chi2=1.5100875279803965 (change=-0.03105930276357257 %)
[2025-05-27 08:35:39] 2025-05-27 06:10:57,013 | INFO     | right removable region: 297
[2025-05-27 08:35:39] 2025-05-27 06:10:57,014 | INFO     | sum of square deviations: 8625843592.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,017 | INFO     | sum of deviations: -25201943576.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,017 | INFO     | mean x: 1748316924.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,017 | INFO     | mean y: 2500365.4488448845
[2025-05-27 08:35:39] 2025-05-27 06:10:57,017 | INFO     | -- intersect: 5110520700.118261
[2025-05-27 08:35:39] 2025-05-27 06:10:57,017 | INFO     | intersect: 5110520700.118261
[2025-05-27 08:35:39] 2025-05-27 06:10:57,018 | INFO     | chi2: 0.863656002985213
[2025-05-27 08:35:39] 2025-05-27 06:10:57,018 | INFO     | current chi2=0.863656002985213 (change=62.18087843681137 %)
[2025-05-27 08:35:39] 2025-05-27 06:10:57,018 | INFO     | sum of square deviations: 8205826414.5
[2025-05-27 08:35:39] 2025-05-27 06:10:57,021 | INFO     | sum of deviations: -26499952816.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,022 | INFO     | mean x: 1748317076.5
[2025-05-27 08:35:39] 2025-05-27 06:10:57,022 | INFO     | mean y: 2500824.463087248
[2025-05-27 08:35:39] 2025-05-27 06:10:57,022 | INFO     | -- intersect: 5648528134.13048
[2025-05-27 08:35:39] 2025-05-27 06:10:57,022 | INFO     | intersect: 5648528134.13048
[2025-05-27 08:35:39] 2025-05-27 06:10:57,022 | INFO     | chi2: 0.8528912730447442
[2025-05-27 08:35:39] 2025-05-27 06:10:57,023 | INFO     | current chi2=0.8528912730447442 (change=1.2464140703313145 %)
[2025-05-27 08:35:39] 2025-05-27 06:10:57,023 | INFO     | left removable region: 20
[2025-05-27 08:35:39] 2025-05-27 06:10:57,023 | INFO     | sum of square deviations: 6590404498.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,026 | INFO     | sum of deviations: 9434581164.999998
[2025-05-27 08:35:39] 2025-05-27 06:10:57,026 | INFO     | mean x: 1748317046.0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,026 | INFO     | mean y: 2501420.4187725633
[2025-05-27 08:35:39] 2025-05-27 06:10:57,026 | INFO     | -- intersect: -2500325087.0658116
[2025-05-27 08:35:39] 2025-05-27 06:10:57,026 | INFO     | intersect: -2500325087.0658116
[2025-05-27 08:35:39] 2025-05-27 06:10:57,026 | INFO     | chi2: 0.006987579389324049
[2025-05-27 08:35:39] 2025-05-27 06:10:57,027 | INFO     | -- intersect: -2500325087.0658116
[2025-05-27 08:35:39] 2025-05-27 06:10:57,027 | INFO     | current memory leak: 1.43 B/s (using 277 data points, chi2=0.01)
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | ..............................
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . Timing measurements:
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . get job = 0 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . initial setup = 2 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . payload setup = 29 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . stage-in = 0 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . payload execution = 18770 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . stage-out = 3 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,028 | INFO     | . log creation = 1 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,029 | INFO     | ..............................
[2025-05-27 08:35:39] 2025-05-27 06:10:57,624 | INFO     | 
[2025-05-27 08:35:39] 2025-05-27 06:10:57,624 | INFO     | job summary report
[2025-05-27 08:35:39] 2025-05-27 06:10:57,624 | INFO     | --------------------------------------------------
[2025-05-27 08:35:39] 2025-05-27 06:10:57,624 | INFO     | PanDA job id: 6665896745
[2025-05-27 08:35:39] 2025-05-27 06:10:57,624 | INFO     | task id: 44871837
[2025-05-27 08:35:39] 2025-05-27 06:10:57,624 | INFO     | errors: (none)
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | pilot state: finished 
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | transexitcode: 0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | exeerrorcode: 0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | exeerrordiag: 
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | exitcode: 0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | exitmsg: OK
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | cpuconsumptiontime: 72440 s
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | nevents: 400
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | neventsw: 0
[2025-05-27 08:35:39] 2025-05-27 06:10:57,625 | INFO     | pid: 19185
[2025-05-27 08:35:39] 2025-05-27 06:10:57,626 | INFO     | pgrp: 19185
[2025-05-27 08:35:39] 2025-05-27 06:10:57,626 | INFO     | corecount: 8
[2025-05-27 08:35:39] 2025-05-27 06:10:57,626 | INFO     | event service: False
[2025-05-27 08:35:39] 2025-05-27 06:10:57,626 | INFO     | sizes: {0: 2405013, 1: 2405212, 2: 2405212, 9: 2405446, 12: 2405474, 18804: 2437374, 18809: 2446317, 18811: 2446401, 18905: 2446571}
[2025-05-27 08:35:39] 2025-05-27 06:10:57,626 | INFO     | --------------------------------------------------
[2025-05-27 08:35:39] 2025-05-27 06:10:57,626 | INFO     | 
[2025-05-27 08:35:39] 2025-05-27 06:10:57,626 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-27 08:35:39] 2025-05-27 06:10:58,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 08:35:39] 2025-05-27 06:10:58,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,044 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 08:35:39] 2025-05-27 06:10:58,044 | INFO     | job 6665896745 has completed (purged errors)
[2025-05-27 08:35:39] 2025-05-27 06:10:58,044 | INFO     | overall cleanup function is called
[2025-05-27 08:35:39] 2025-05-27 06:10:59,058 | INFO     | --- collectZombieJob: --- 10, [19185]
[2025-05-27 08:35:39] 2025-05-27 06:10:59,058 | INFO     | zombie collector waiting for pid 19185
[2025-05-27 08:35:39] 2025-05-27 06:10:59,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 08:35:39] 2025-05-27 06:10:59,058 | INFO     | collected zombie processes
[2025-05-27 08:35:39] 2025-05-27 06:10:59,058 | INFO     | will attempt to kill all subprocesses of pid=19185
[2025-05-27 08:35:39] 2025-05-27 06:10:59,183 | INFO     | process IDs to be killed: [19185] (in reverse order)
[2025-05-27 08:35:39] 2025-05-27 06:10:59,978 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 08:35:39] 2025-05-27 06:10:59,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 08:35:39] 2025-05-27 06:10:59,987 | INFO     | did not find any defunct processes belonging to 19185
[2025-05-27 08:35:39] 2025-05-27 06:10:59,990 | INFO     | did not find any defunct processes belonging to 19185
[2025-05-27 08:35:39] 2025-05-27 06:10:59,990 | INFO     | ready for new job
[2025-05-27 08:35:39] 2025-05-27 06:10:59,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 08:35:39] 2025-05-27 06:10:59,993 | INFO     | **************************************
[2025-05-27 08:35:39] 2025-05-27 06:10:59,993 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 08:35:39] 2025-05-27 06:10:59,993 | INFO     | **************************************
[2025-05-27 08:35:39] 2025-05-27 06:10:59,993 | INFO     | 
[2025-05-27 08:35:39] 2025-05-27 06:10:59,994 | INFO     | pilot is running in a VM
[2025-05-27 08:35:39] 2025-05-27 06:10:59,994 | INFO     | architecture information:
[2025-05-27 08:35:39] 2025-05-27 06:11:00,009 | INFO     | executing command: cat /etc/os-release
[2025-05-27 08:35:39] 2025-05-27 06:11:00,284 | INFO     | cat /etc/os-release:
[2025-05-27 08:35:39] NAME="CentOS Linux"
[2025-05-27 08:35:39] VERSION="7 (Core)"
[2025-05-27 08:35:39] ID="centos"
[2025-05-27 08:35:39] ID_LIKE="rhel fedora"
[2025-05-27 08:35:39] VERSION_ID="7"
[2025-05-27 08:35:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 08:35:39] ANSI_COLOR="0;31"
[2025-05-27 08:35:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 08:35:39] HOME_URL="https://www.centos.org/"
[2025-05-27 08:35:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 08:35:39] 
[2025-05-27 08:35:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 08:35:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 08:35:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 08:35:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 08:35:39] 
[2025-05-27 08:35:39] 2025-05-27 06:11:00,284 | INFO     | **************************************
[2025-05-27 08:35:39] 2025-05-27 06:11:00,788 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-27 08:35:39] 2025-05-27 06:11:00,930 | INFO     | sufficient remaining disk space (494825111552 B)
[2025-05-27 08:35:39] 2025-05-27 06:11:00,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 08:35:39] 2025-05-27 06:11:00,930 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 08:35:39] 2025-05-27 06:11:00,930 | INFO     | update_server=False
[2025-05-27 08:35:39] 2025-05-27 06:11:00,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 08:35:39] 2025-05-27 06:11:01,316 | INFO     | all data control threads have been joined
[2025-05-27 08:35:39] 2025-05-27 06:11:01,436 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 08:35:39] 2025-05-27 06:11:01,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 08:35:39] 2025-05-27 06:11:01,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 08:35:39] 2025-05-27 06:11:01,477 | INFO     | all job control threads have been joined
[2025-05-27 08:35:39] 2025-05-27 06:11:01,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 08:35:39] 2025-05-27 06:11:01,600 | INFO     | aborting loop
[2025-05-27 08:35:39] 2025-05-27 06:11:01,652 | INFO     | all payload control threads have been joined
[2025-05-27 08:35:39] 2025-05-27 06:11:01,937 | INFO     | [job] retrieve thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:01,968 | INFO     | [payload] failed_post thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 08:35:39] 2025-05-27 06:11:02,090 | INFO     | [payload] validate_post thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 08:35:39] 2025-05-27 06:11:02,280 | INFO     | [data] copytool_in thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,322 | INFO     | [data] control thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,337 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,397 | INFO     | [job] validate thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,483 | INFO     | [job] control thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,606 | INFO     | [job] job monitor thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,657 | INFO     | [payload] control thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,818 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,837 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:02,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:03,210 | INFO     | [job] queue monitor thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:03,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 08:35:39] 2025-05-27 06:11:04,047 | INFO     | [data] copytool_out thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:07,434 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 08:35:39] 2025-05-27 06:11:07,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054454269760)>', '<ExcThread(monitor, started 140054143936256)>']
[2025-05-27 08:35:39] 2025-05-27 06:11:08,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 08:35:39] 2025-05-27 06:11:08,479 | INFO     | [monitor] control thread has ended
[2025-05-27 08:35:39] 2025-05-27 06:11:13,016 | INFO     | all workflow threads have been joined
[2025-05-27 08:35:39] 2025-05-27 06:11:13,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 08:35:39] 2025-05-27 06:11:13,016 | INFO     | traces error code: 0
[2025-05-27 08:35:39] 2025-05-27 06:11:13,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 08:35:39] 2025-05-27 06:11:13,400 [wrapper] ==== pilot stdout END ====
[2025-05-27 08:35:39] 2025-05-27 06:11:13,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 08:35:39] 2025-05-27 06:11:13,633 [wrapper] pilotpid: 7187
[2025-05-27 08:35:39] 2025-05-27 06:11:13,705 [wrapper] Pilot exit status: 0
[2025-05-27 08:35:39] 2025-05-27 06:11:14,265 [wrapper] pandaids: 6665896745
[2025-05-27 08:35:39] 2025-05-27 06:11:14,866 [wrapper] cleanup supervisor_pilot  7604 7188
[2025-05-27 08:35:39] 2025-05-27 06:11:14,980 [wrapper] Test setup, not cleaning
[2025-05-27 08:35:39] 2025-05-27 06:11:15,052 [wrapper] apfmon messages muted
[2025-05-27 08:35:39] 2025-05-27 06:11:15,153 [wrapper] ==== wrapper stdout END ====
[2025-05-27 08:35:39] 2025-05-27 06:11:15,227 [wrapper] ==== wrapper stderr END ====
[2025-05-27 08:35:39]  *** Error codes and diagnostics ***
[2025-05-27 08:35:39]     "exeErrorCode": 0,
[2025-05-27 08:35:39]     "exeErrorDiag": "",
[2025-05-27 08:35:39]     "pilotErrorCode": 0,
[2025-05-27 08:35:39]     "pilotErrorDiag": "",
[2025-05-27 08:35:39]  *** Listing of results directory ***
[2025-05-27 08:35:39] total 424860
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc    495897 May 26 12:58 pilot3.tar.gz
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc      5111 May 26 13:02 queuedata.json
[2025-05-27 08:35:39] -rwx------. 1 boinc boinc     37140 May 26 13:02 runpilot2-wrapper.sh
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc       100 May 27 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 08:35:39] -rwxr-xr-x. 1 boinc boinc      7986 May 27 02:55 run_atlas
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc       105 May 27 02:55 job.xml
[2025-05-27 08:35:39] -rw-r--r--. 2 boinc boinc 226555419 May 27 02:55 EVNT.44871834._001963.pool.root.1
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc      6372 May 27 02:55 init_data.xml
[2025-05-27 08:35:39] -rw-r--r--. 2 boinc boinc     15093 May 27 02:55 start_atlas.sh
[2025-05-27 08:35:39] drwxrwx--x. 2 boinc boinc        68 May 27 02:55 shared
[2025-05-27 08:35:39] -rw-r--r--. 2 boinc boinc    508876 May 27 02:55 input.tar.gz
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc         0 May 27 02:55 boinc_lockfile
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc      2558 May 27 02:55 pandaJob.out
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc    990410 May 27 02:55 agis_schedconf.cvmfs.json
[2025-05-27 08:35:39] drwx------. 4 boinc boinc      4096 May 27 02:55 pilot3
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc 200600617 May 27 08:07 HITS.44871837._049247.pool.root.1
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc       531 May 27 08:08 boinc_task_state.xml
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc      1017 May 27 08:09 memory_monitor_summary.json
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc   1603667 May 27 08:09 agis_ddmendpoints.agis.ALL.json
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc    419911 May 27 08:09 log.44871837._049247.job.log.tgz.1
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc        95 May 27 08:10 pilot_heartbeat.json
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc      7690 May 27 08:10 heartbeat.json
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc      4417 May 27 08:11 pilotlog.txt
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc   1617883 May 27 08:11 log.44871837._049247.job.log.1
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc       357 May 27 08:11 output.list
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc       620 May 27 08:11 runtime_log
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc   2058240 May 27 08:11 result.tar.gz
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc       656 May 27 08:11 yHULDm1lkd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6WWKDmDlADpn.diag
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc      8673 May 27 08:11 runtime_log.err
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc      8192 May 27 08:35 boinc_mmap_file
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc        28 May 27 08:35 wrapper_checkpoint.txt
[2025-05-27 08:35:39] -rw-r--r--. 1 boinc boinc     20492 May 27 08:35 stderr.txt
[2025-05-27 08:35:39] HITS file was successfully produced:
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc 200600617 May 27 08:07 shared/HITS.pool.root.1
[2025-05-27 08:35:39]  *** Contents of shared directory: ***
[2025-05-27 08:35:39] total 419676
[2025-05-27 08:35:39] -rw-r--r--. 2 boinc boinc 226555419 May 27 02:55 ATLAS.root_0
[2025-05-27 08:35:39] -rw-r--r--. 2 boinc boinc     15093 May 27 02:55 start_atlas.sh
[2025-05-27 08:35:39] -rw-r--r--. 2 boinc boinc    508876 May 27 02:55 input.tar.gz
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc 200600617 May 27 08:07 HITS.pool.root.1
[2025-05-27 08:35:39] -rw-------. 1 boinc boinc   2058240 May 27 08:11 result.tar.gz
08:35:41 (31958): run_atlas exited; CPU time 72694.793987
08:35:41 (31958): called boinc_finish(0)

</stderr_txt>
]]>

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