Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 22:17:07 (10948): Detected: vboxwrapper 26206
2025-05-26 22:17:07 (10948): Detected: BOINC client v8.0.2
2025-05-26 22:17:08 (10948): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-26 22:17:08 (10948): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 22:17:08 (10948): Create VM. (boinc_e2d109a78590ffe2, slot#2)
2025-05-26 22:17:09 (10948): Setting Memory Size for VM. (4800MB)
2025-05-26 22:17:09 (10948): Setting CPU Count for VM. (8)
2025-05-26 22:17:09 (10948): Setting Chipset Options for VM.
2025-05-26 22:17:10 (10948): Setting Graphics Controller Options for VM.
2025-05-26 22:17:10 (10948): Setting Boot Options for VM.
2025-05-26 22:17:10 (10948): Setting Network Configuration for NAT.
2025-05-26 22:17:10 (10948): Enabling VM Network Access.
2025-05-26 22:17:11 (10948): Disabling USB Support for VM.
2025-05-26 22:17:11 (10948): Disabling COM Port Support for VM.
2025-05-26 22:17:11 (10948): Disabling LPT Port Support for VM.
2025-05-26 22:17:11 (10948): Disabling Audio Support for VM.
2025-05-26 22:17:12 (10948): Disabling Clipboard Support for VM.
2025-05-26 22:17:12 (10948): Disabling Drag and Drop Support for VM.
2025-05-26 22:17:12 (10948): Adding storage controller(s) to VM.
2025-05-26 22:17:12 (10948): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 22:17:15 (10948): Adding VirtualBox Guest Additions to VM.
2025-05-26 22:17:15 (10948): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 22:17:16 (10948): forwarding host port 52420 to guest port 80
2025-05-26 22:17:16 (10948): Enabling remote desktop for VM.
2025-05-26 22:17:16 (10948): Enabling shared directory for VM.
2025-05-26 22:17:17 (10948): Starting VM using VBoxManage interface. (boinc_e2d109a78590ffe2, slot#2)
2025-05-26 22:17:22 (10948): Successfully started VM. (PID = '12156')
2025-05-26 22:17:22 (10948): Reporting VM Process ID to BOINC.
2025-05-26 22:17:22 (10948): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-26 22:17:22 (10948): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 22:17:22 (10948): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-26 22:17:22 (10948): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 22:17:22 (10948): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 22:17:22 (10948): Detected: Web Application Enabled (http://localhost:52420)
2025-05-26 22:17:22 (10948): Detected: Remote Desktop Enabled (localhost:52421)
2025-05-26 22:17:22 (10948): Preference change detected
2025-05-26 22:17:22 (10948): Setting CPU throttle for VM. (100%)
2025-05-26 22:17:23 (10948): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 22:17:24 (10948): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 22:17:24 (10948): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 22:17:27 (10948): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 22:17:27 (10948): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 22:17:27 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 22:17:28 (10948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 22:17:32 (10948): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 22:17:32 (10948): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 22:17:37 (10948): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 22:17:37 (10948): Guest Log: 00:00:00.000156 main     Log opened 2025-05-26T22:17:34.861300000Z
2025-05-26 22:17:38 (10948): Guest Log: 00:00:00.000238 main     OS Product: Linux
2025-05-26 22:17:38 (10948): Guest Log: 00:00:00.000298 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 22:17:38 (10948): Guest Log: 00:00:00.000322 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 22:17:38 (10948): Guest Log: 00:00:00.000347 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 22:17:38 (10948): Guest Log: 00:00:00.000347 main     Process ID: 1373
2025-05-26 22:17:38 (10948): Guest Log: 00:00:00.000348 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 22:17:38 (10948): Guest Log: 00:00:00.002289 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 22:17:38 (10948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 22:17:38 (10948): Guest Log: [INFO] Mounting shared directory
2025-05-26 22:17:38 (10948): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 22:17:48 (10948): Guest Log: 00:00:10.025744 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 541 284 000ns (GuestNow=1 748 290 667 323 785 000 ns GuestLast=1 748 297 854 865 069 000 ns fSetTimeLastLoop=true )
2025-05-26 22:19:15 (10948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 22:19:15 (10948): Guest Log: [INFO] Detected branch: prod
2025-05-26 22:19:16 (10948): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 22:19:16 (10948): Guest Log: Copying input files
2025-05-26 22:19:17 (10948): Guest Log: Copied input files into RunAtlas.
2025-05-26 22:19:17 (10948): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 22:19:17 (10948): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 22:19:17 (10948): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 22:19:17 (10948): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 22:20:20 (10948): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 22:20:20 (10948): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 22:20:20 (10948): Guest Log: 2.6.3.0 1693 1 32284 146455 4 1 3117617 4096000 0 65024 0 0 n/a 1 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 22:20:21 (10948): Guest Log: copied the webapp to /var/www
2025-05-26 22:20:21 (10948): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-26 22:20:21 (10948): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-26 22:20:21 (10948): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 22:20:21 (10948): Guest Log:  *** Starting ATLAS job. (PandaID=6665751310 taskID=44871837) ***
2025-05-26 22:30:02 (10948): Guest Log:  *** Job finished ***
2025-05-26 22:30:02 (10948): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:29:53,391 | INFO     | [payload] validate_pre thread has finished
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:29:53,496 | INFO     | [job] control thread has finished
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:29:55,151 | INFO     | [data] queue_monitor thread has finished
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:29:56,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139759492257600)>', '<ExcThread(monitor, started 139758839789312)>']
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:29:57,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:29:57,075 | INFO     | [monitor] control thread has ended
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,274 | INFO     | all workflow threads have been joined
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,275 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,275 | INFO     | traces error code: 0
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,344 [wrapper] ==== pilot stdout END ====
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,348 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,353 [wrapper] pilotpid: 6090
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,358 [wrapper] Pilot exit status: 0
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,422 [wrapper] pandaids: 6665751310
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,454 [wrapper] cleanup supervisor_pilot  6096 6091
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,459 [wrapper] Test setup, not cleaning
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,464 [wrapper] apfmon messages muted
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,469 [wrapper] ==== wrapper stdout END ====
2025-05-26 22:30:02 (10948): Guest Log: 2025-05-26 20:30:01,474 [wrapper] ==== wrapper stderr END ====
2025-05-26 22:30:02 (10948): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 22:30:02 (10948): Guest Log:     "exeErrorCode": 65,
2025-05-26 22:30:02 (10948): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-05-26 22:30:02 (10948): Guest Log:     "pilotErrorCode": 1305,
2025-05-26 22:30:02 (10948): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-05-26 22:30:02 (10948): Guest Log:  *** Listing of results directory ***
2025-05-26 22:30:02 (10948): Guest Log: total 3888
2025-05-26 22:30:02 (10948): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 26 01:12 pilot3.tar.gz
2025-05-26 22:30:02 (10948): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 26 01:24 queuedata.json
2025-05-26 22:30:02 (10948): Guest Log: -rwx------. 1 atlas atlas   37140 May 26 01:25 runpilot2-wrapper.sh
2025-05-26 22:30:02 (10948): Guest Log: -rwxr-xr-x. 1 atlas atlas    9128 May 26 20:19 init_data.xml
2025-05-26 22:30:02 (10948): Guest Log: -rwxr-xr-x. 1 atlas atlas  508880 May 26 20:19 input.tar.gz
2025-05-26 22:30:02 (10948): Guest Log: -rwxr-xr-x. 1 atlas atlas   15093 May 26 20:19 start_atlas.sh
2025-05-26 22:30:02 (10948): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 26 20:19 EVNT.44871834._001748.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 22:30:02 (10948): Guest Log: -rw-r--r--. 1 atlas atlas    2559 May 26 20:20 pandaJob.out
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas  990402 May 26 20:24 agis_schedconf.cvmfs.json
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas 1603667 May 26 20:24 agis_ddmendpoints.agis.ALL.json
2025-05-26 22:30:02 (10948): Guest Log: drwx------. 4 atlas atlas    4096 May 26 20:24 pilot3
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas    1009 May 26 20:27 memory_monitor_summary.json
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas   21273 May 26 20:27 log.44871837._043809.job.log.tgz.1
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas      95 May 26 20:29 pilot_heartbeat.json
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas    8366 May 26 20:29 heartbeat.json
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas    4536 May 26 20:30 pilotlog.txt
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas   84140 May 26 20:30 log.44871837._043809.job.log.1
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas     188 May 26 20:30 output.list
2025-05-26 22:30:02 (10948): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 26 20:30 runtime_log
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas  122880 May 26 20:30 result.tar.gz
2025-05-26 22:30:02 (10948): Guest Log: -rw-r--r--. 1 atlas atlas    8474 May 26 20:30 runtime_log.err
2025-05-26 22:30:02 (10948): Guest Log: -rw-------. 1 atlas atlas     655 May 26 20:30 9vXKDmplbd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMdVKDmMaSofm.diag
2025-05-26 22:30:02 (10948): Guest Log: Looking for outputfile HITS.44871837._043809.pool.root.1
2025-05-26 22:30:02 (10948): Guest Log: No HITS file was produced
2025-05-26 22:30:02 (10948): Guest Log: Successfully finished the ATLAS job!
2025-05-26 22:30:02 (10948): Guest Log: Copying the results back to the shared directory!
2025-05-26 22:30:02 (10948): Guest Log:  *** Contents of shared directory: ***
2025-05-26 22:30:02 (10948): Guest Log: total 220012
2025-05-26 22:30:02 (10948): Guest Log: -rwxrwxrwx. 1 root root 224624798 May 26 20:17 ATLAS.root_0
2025-05-26 22:30:02 (10948): Guest Log: -rwxrwxrwx. 1 root root      9128 May 26 20:17 init_data.xml
2025-05-26 22:30:02 (10948): Guest Log: -rwxrwxrwx. 1 root root    508880 May 26 15:52 input.tar.gz
2025-05-26 22:30:02 (10948): Guest Log: -rwxrwxrwx. 1 root root    122880 May 26 20:30 result.tar.gz
2025-05-26 22:30:02 (10948): Guest Log: -rwxrwxrwx. 1 root root     15093 May 26 15:52 start_atlas.sh
2025-05-26 22:30:02 (10948): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 22:30:02 (10948): VM Completion File Detected.
2025-05-26 22:30:02 (10948): Powering off VM.
2025-05-26 22:30:03 (10948): Successfully stopped VM.
2025-05-26 22:30:03 (10948): Deregistering VM. (boinc_e2d109a78590ffe2, slot#2)
2025-05-26 22:30:03 (10948): Removing network bandwidth throttle group from VM.
2025-05-26 22:30:03 (10948): Removing VM from VirtualBox.
22:30:08 (10948): called boinc_finish(0)

</stderr_txt>
]]>

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