Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:25:55 (12097): wrapper (7.7.26015): starting
04:25:55 (12097): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 04:25:55] Arguments: --nthreads 8
[2025-05-27 04:25:55] Threads: 8
[2025-05-27 04:25:55] Checking for CVMFS
[2025-05-27 04:25:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 04:25:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 04:25:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 04:25:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 04:25:58] 2.11.2.0 22062 21267 97600 146465 2 129 20164894 25165824 4355 130560 0 12237935 99.777 13302233 1732 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 04:25:58] CVMFS is ok
[2025-05-27 04:25:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 04:25:58] Checking for apptainer binary...
[2025-05-27 04:25:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 04:25:58] Running /usr/bin/apptainer --version
[2025-05-27 04:25:58] apptainer version 1.3.2-1.el7
[2025-05-27 04:25:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 04:26:11] cg-vwn481.simple-grid.lan
[2025-05-27 04:26:11] apptainer works
[2025-05-27 04:26:11] Set ATHENA_PROC_NUMBER=8
[2025-05-27 04:26:11] Set ATHENA_CORE_NUMBER=8
[2025-05-27 04:26:11] Starting ATLAS job with PandaID=6665751571
[2025-05-27 04:26:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 10:52:35]  *** The last 200 lines of the pilot log: ***
[2025-05-27 10:52:35] 2025-05-27 07:14:27,437 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6665751571/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 10:52:35] 2025-05-27 07:14:27,438 | INFO     | extracted standard info from prmon json
[2025-05-27 10:52:35] 2025-05-27 07:14:27,438 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 10:52:35] 2025-05-27 07:14:27,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 10:52:35] 2025-05-27 07:14:27,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 10:52:35] 2025-05-27 07:14:27,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 10:52:35] 2025-05-27 07:14:27,444 | INFO     | fitting pss+swap vs Time
[2025-05-27 10:52:35] 2025-05-27 07:14:27,444 | INFO     | sum of square deviations: 6880054580.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,447 | INFO     | sum of deviations: -16248910806.999996
[2025-05-27 10:52:35] 2025-05-27 07:14:27,447 | INFO     | mean x: 1748321377.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,447 | INFO     | mean y: 2498047.412811388
[2025-05-27 10:52:35] 2025-05-27 07:14:27,447 | INFO     | -- intersect: 4131581296.1745405
[2025-05-27 10:52:35] 2025-05-27 07:14:27,447 | INFO     | intersect: 4131581296.1745405
[2025-05-27 10:52:35] 2025-05-27 07:14:27,448 | INFO     | chi2: 2.3599016741701595
[2025-05-27 10:52:35] 2025-05-27 07:14:27,448 | INFO     | sum of square deviations: 6519285025.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,450 | INFO     | sum of deviations: 2425451926.999978
[2025-05-27 10:52:35] 2025-05-27 07:14:27,451 | INFO     | mean x: 1748321224.5
[2025-05-27 10:52:35] 2025-05-27 07:14:27,451 | INFO     | mean y: 2505827.9420289854
[2025-05-27 10:52:35] 2025-05-27 07:14:27,451 | INFO     | -- intersect: -647944193.2976062
[2025-05-27 10:52:35] 2025-05-27 07:14:27,451 | INFO     | intersect: -647944193.2976062
[2025-05-27 10:52:35] 2025-05-27 07:14:27,451 | INFO     | chi2: 1.5945307276388558
[2025-05-27 10:52:35] 2025-05-27 07:14:27,451 | INFO     | current chi2=1.5945307276388558 (change=32.4323235543464 %)
[2025-05-27 10:52:35] 2025-05-27 07:14:27,452 | INFO     | sum of square deviations: 6171352920.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,454 | INFO     | sum of deviations: 2265909720.999997
[2025-05-27 10:52:35] 2025-05-27 07:14:27,454 | INFO     | mean x: 1748321072.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,454 | INFO     | mean y: 2505758.2693726937
[2025-05-27 10:52:35] 2025-05-27 07:14:27,455 | INFO     | -- intersect: -639417943.6850986
[2025-05-27 10:52:35] 2025-05-27 07:14:27,455 | INFO     | intersect: -639417943.6850986
[2025-05-27 10:52:35] 2025-05-27 07:14:27,455 | INFO     | chi2: 1.5944949539555595
[2025-05-27 10:52:35] 2025-05-27 07:14:27,455 | INFO     | current chi2=1.5944949539555595 (change=0.002243524234198859 %)
[2025-05-27 10:52:35] 2025-05-27 07:14:27,455 | INFO     | right removable region: 270
[2025-05-27 10:52:35] 2025-05-27 07:14:27,456 | INFO     | sum of square deviations: 6519285025.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,458 | INFO     | sum of deviations: -58734786929.500015
[2025-05-27 10:52:35] 2025-05-27 07:14:27,458 | INFO     | mean x: 1748321529.5
[2025-05-27 10:52:35] 2025-05-27 07:14:27,458 | INFO     | mean y: 2515855.7210144927
[2025-05-27 10:52:35] 2025-05-27 07:14:27,458 | INFO     | -- intersect: 15753827867.031652
[2025-05-27 10:52:35] 2025-05-27 07:14:27,458 | INFO     | intersect: 15753827867.031652
[2025-05-27 10:52:35] 2025-05-27 07:14:27,459 | INFO     | chi2: 0.9067063064392826
[2025-05-27 10:52:35] 2025-05-27 07:14:27,459 | INFO     | current chi2=0.9067063064392826 (change=61.57864048475161 %)
[2025-05-27 10:52:35] 2025-05-27 07:14:27,459 | INFO     | sum of square deviations: 6171352920.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,461 | INFO     | sum of deviations: -61022409265.000015
[2025-05-27 10:52:35] 2025-05-27 07:14:27,462 | INFO     | mean x: 1748321682.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,462 | INFO     | mean y: 2516846.985239852
[2025-05-27 10:52:35] 2025-05-27 07:14:27,462 | INFO     | -- intersect: 17289941920.364
[2025-05-27 10:52:35] 2025-05-27 07:14:27,462 | INFO     | intersect: 17289941920.364
[2025-05-27 10:52:35] 2025-05-27 07:14:27,462 | INFO     | chi2: 0.8910381563048161
[2025-05-27 10:52:35] 2025-05-27 07:14:27,462 | INFO     | current chi2=0.8910381563048161 (change=1.7280292442209626 %)
[2025-05-27 10:52:35] 2025-05-27 07:14:27,463 | INFO     | left removable region: 20
[2025-05-27 10:52:35] 2025-05-27 07:14:27,463 | INFO     | sum of square deviations: 4844974562.5
[2025-05-27 10:52:35] 2025-05-27 07:14:27,465 | INFO     | sum of deviations: -26743961600.0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,465 | INFO     | mean x: 1748321651.5
[2025-05-27 10:52:35] 2025-05-27 07:14:27,465 | INFO     | mean y: 2518229.872
[2025-05-27 10:52:35] 2025-05-27 07:14:27,465 | INFO     | -- intersect: 9653146217.490992
[2025-05-27 10:52:35] 2025-05-27 07:14:27,465 | INFO     | intersect: 9653146217.490992
[2025-05-27 10:52:35] 2025-05-27 07:14:27,466 | INFO     | chi2: 0.07776883890350361
[2025-05-27 10:52:35] 2025-05-27 07:14:27,466 | INFO     | -- intersect: 9653146217.490992
[2025-05-27 10:52:35] 2025-05-27 07:14:27,466 | INFO     | current memory leak: -5.52 B/s (using 250 data points, chi2=0.08)
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | ..............................
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . Timing measurements:
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . get job = 0 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . initial setup = 2 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . payload setup = 11 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . stage-in = 0 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . payload execution = 17136 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . stage-out = 13 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | . log creation = 0 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,467 | INFO     | ..............................
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | 
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | job summary report
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | --------------------------------------------------
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | PanDA job id: 6665751571
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | task id: 44871837
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | errors: (none)
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 10:52:35] 2025-05-27 07:14:27,596 | INFO     | pilot state: finished 
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | transexitcode: 0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | exeerrorcode: 0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | exeerrordiag: 
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | exitcode: 0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | exitmsg: OK
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | cpuconsumptiontime: 65473 s
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | nevents: 400
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | neventsw: 0
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | pid: 24401
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | pgrp: 24401
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | corecount: 8
[2025-05-27 10:52:35] 2025-05-27 07:14:27,597 | INFO     | event service: False
[2025-05-27 10:52:35] 2025-05-27 07:14:27,598 | INFO     | sizes: {0: 2405229, 1: 2405229, 7: 2405463, 11: 2405491, 17152: 2436640, 17166: 2445583, 17169: 2445767, 17261: 2445937}
[2025-05-27 10:52:35] 2025-05-27 07:14:27,598 | INFO     | --------------------------------------------------
[2025-05-27 10:52:35] 2025-05-27 07:14:27,598 | INFO     | 
[2025-05-27 10:52:35] 2025-05-27 07:14:27,598 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-27 10:52:35] 2025-05-27 07:14:28,013 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 10:52:35] 2025-05-27 07:14:28,015 | INFO     | job 6665751571 has completed (purged errors)
[2025-05-27 10:52:35] 2025-05-27 07:14:28,016 | INFO     | overall cleanup function is called
[2025-05-27 10:52:35] 2025-05-27 07:14:29,024 | INFO     | --- collectZombieJob: --- 10, [24401]
[2025-05-27 10:52:35] 2025-05-27 07:14:29,024 | INFO     | zombie collector waiting for pid 24401
[2025-05-27 10:52:35] 2025-05-27 07:14:29,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 10:52:35] 2025-05-27 07:14:29,024 | INFO     | collected zombie processes
[2025-05-27 10:52:35] 2025-05-27 07:14:29,024 | INFO     | will attempt to kill all subprocesses of pid=24401
[2025-05-27 10:52:35] 2025-05-27 07:14:29,124 | INFO     | process IDs to be killed: [24401] (in reverse order)
[2025-05-27 10:52:35] 2025-05-27 07:14:29,930 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 10:52:35] 2025-05-27 07:14:29,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 10:52:35] 2025-05-27 07:14:29,933 | INFO     | did not find any defunct processes belonging to 24401
[2025-05-27 10:52:35] 2025-05-27 07:14:29,943 | INFO     | did not find any defunct processes belonging to 24401
[2025-05-27 10:52:35] 2025-05-27 07:14:29,944 | INFO     | ready for new job
[2025-05-27 10:52:35] 2025-05-27 07:14:29,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 10:52:35] 2025-05-27 07:14:29,945 | INFO     | **************************************
[2025-05-27 10:52:35] 2025-05-27 07:14:29,946 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 10:52:35] 2025-05-27 07:14:29,946 | INFO     | **************************************
[2025-05-27 10:52:35] 2025-05-27 07:14:29,946 | INFO     | 
[2025-05-27 10:52:35] 2025-05-27 07:14:29,946 | INFO     | pilot is running in a VM
[2025-05-27 10:52:35] 2025-05-27 07:14:29,946 | INFO     | architecture information:
[2025-05-27 10:52:35] 2025-05-27 07:14:29,961 | INFO     | executing command: cat /etc/os-release
[2025-05-27 10:52:35] 2025-05-27 07:14:30,195 | INFO     | cat /etc/os-release:
[2025-05-27 10:52:35] NAME="CentOS Linux"
[2025-05-27 10:52:35] VERSION="7 (Core)"
[2025-05-27 10:52:35] ID="centos"
[2025-05-27 10:52:35] ID_LIKE="rhel fedora"
[2025-05-27 10:52:35] VERSION_ID="7"
[2025-05-27 10:52:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 10:52:35] ANSI_COLOR="0;31"
[2025-05-27 10:52:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 10:52:35] HOME_URL="https://www.centos.org/"
[2025-05-27 10:52:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 10:52:35] 
[2025-05-27 10:52:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 10:52:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 10:52:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 10:52:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 10:52:35] 
[2025-05-27 10:52:35] 2025-05-27 07:14:30,196 | INFO     | **************************************
[2025-05-27 10:52:35] 2025-05-27 07:14:30,699 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-27 10:52:35] 2025-05-27 07:14:30,869 | INFO     | sufficient remaining disk space (494550384640 B)
[2025-05-27 10:52:35] 2025-05-27 07:14:30,870 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 10:52:35] 2025-05-27 07:14:30,870 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 10:52:35] 2025-05-27 07:14:30,870 | INFO     | update_server=False
[2025-05-27 10:52:35] 2025-05-27 07:14:30,870 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 10:52:35] 2025-05-27 07:14:30,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 10:52:35] 2025-05-27 07:14:30,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 10:52:35] 2025-05-27 07:14:30,876 | INFO     | aborting loop
[2025-05-27 10:52:35] 2025-05-27 07:14:30,929 | INFO     | all data control threads have been joined
[2025-05-27 10:52:35] 2025-05-27 07:14:31,349 | INFO     | all payload control threads have been joined
[2025-05-27 10:52:35] 2025-05-27 07:14:31,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 10:52:35] 2025-05-27 07:14:31,821 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 10:52:35] 2025-05-27 07:14:31,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 10:52:35] 2025-05-27 07:14:31,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 10:52:35] 2025-05-27 07:14:31,875 | INFO     | [job] retrieve thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:31,882 | INFO     | [job] job monitor thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:31,928 | INFO     | [payload] validate_post thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:31,935 | INFO     | [data] control thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:32,190 | INFO     | [payload] failed_post thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:32,244 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:32,355 | INFO     | [payload] control thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:32,462 | INFO     | all job control threads have been joined
[2025-05-27 10:52:35] 2025-05-27 07:14:32,497 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:32,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 10:52:35] 2025-05-27 07:14:32,831 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:32,878 | INFO     | [data] copytool_out thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:32,998 | INFO     | [data] copytool_in thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:33,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:33,216 | INFO     | [job] validate thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:33,467 | INFO     | [job] control thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:33,617 | INFO     | [job] queue monitor thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:35,687 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 10:52:35] 2025-05-27 07:14:36,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633312515904)>', '<ExcThread(monitor, started 140632630736640)>']
[2025-05-27 10:52:35] 2025-05-27 07:14:36,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 10:52:35] 2025-05-27 07:14:36,851 | INFO     | [monitor] control thread has ended
[2025-05-27 10:52:35] 2025-05-27 07:14:41,762 | INFO     | all workflow threads have been joined
[2025-05-27 10:52:35] 2025-05-27 07:14:41,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 10:52:35] 2025-05-27 07:14:41,762 | INFO     | traces error code: 0
[2025-05-27 10:52:35] 2025-05-27 07:14:41,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 10:52:35] 2025-05-27 07:14:42,052 [wrapper] ==== pilot stdout END ====
[2025-05-27 10:52:35] 2025-05-27 07:14:42,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 10:52:35] 2025-05-27 07:14:42,295 [wrapper] pilotpid: 17318
[2025-05-27 10:52:35] 2025-05-27 07:14:42,376 [wrapper] Pilot exit status: 0
[2025-05-27 10:52:35] 2025-05-27 07:14:42,859 [wrapper] pandaids: 6665751571
[2025-05-27 10:52:35] 2025-05-27 07:14:43,219 [wrapper] cleanup supervisor_pilot 30339 17319
[2025-05-27 10:52:35] 2025-05-27 07:14:43,301 [wrapper] Test setup, not cleaning
[2025-05-27 10:52:35] 2025-05-27 07:14:43,389 [wrapper] apfmon messages muted
[2025-05-27 10:52:35] 2025-05-27 07:14:43,422 [wrapper] ==== wrapper stdout END ====
[2025-05-27 10:52:35] 2025-05-27 07:14:43,458 [wrapper] ==== wrapper stderr END ====
[2025-05-27 10:52:35]  *** Error codes and diagnostics ***
[2025-05-27 10:52:35]     "exeErrorCode": 0,
[2025-05-27 10:52:35]     "exeErrorDiag": "",
[2025-05-27 10:52:35]     "pilotErrorCode": 0,
[2025-05-27 10:52:35]     "pilotErrorDiag": "",
[2025-05-27 10:52:35]  *** Listing of results directory ***
[2025-05-27 10:52:35] total 426448
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc    495897 May 26 03:12 pilot3.tar.gz
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc      5111 May 26 03:55 queuedata.json
[2025-05-27 10:52:35] -rwx------. 1 boinc boinc     37140 May 26 03:55 runpilot2-wrapper.sh
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc       100 May 27 04:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 10:52:35] -rwxr-xr-x. 1 boinc boinc      7986 May 27 04:25 run_atlas
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc       105 May 27 04:25 job.xml
[2025-05-27 10:52:35] -rw-r--r--. 2 boinc boinc 226740291 May 27 04:25 EVNT.44871834._001754.pool.root.1
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc      6373 May 27 04:25 init_data.xml
[2025-05-27 10:52:35] -rw-r--r--. 2 boinc boinc     15093 May 27 04:25 start_atlas.sh
[2025-05-27 10:52:35] drwxrwx--x. 2 boinc boinc        68 May 27 04:25 shared
[2025-05-27 10:52:35] -rw-r--r--. 2 boinc boinc    508879 May 27 04:25 input.tar.gz
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc         0 May 27 04:25 boinc_lockfile
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc      2556 May 27 04:26 pandaJob.out
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc    990410 May 27 04:26 agis_schedconf.cvmfs.json
[2025-05-27 10:52:35] drwx------. 4 boinc boinc      4096 May 27 04:26 pilot3
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc 202346301 May 27 09:11 HITS.44871837._043954.pool.root.1
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc       530 May 27 09:11 boinc_task_state.xml
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc      1018 May 27 09:12 memory_monitor_summary.json
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc   1603667 May 27 09:12 agis_ddmendpoints.agis.ALL.json
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc    398707 May 27 09:12 log.44871837._043954.job.log.tgz.1
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc        95 May 27 09:14 pilot_heartbeat.json
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc      7685 May 27 09:14 heartbeat.json
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc      4417 May 27 09:14 pilotlog.txt
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc   1490054 May 27 09:14 log.44871837._043954.job.log.1
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc       357 May 27 09:14 output.list
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc       620 May 27 09:14 runtime_log
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc   1904640 May 27 09:14 result.tar.gz
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc      8673 May 27 09:14 runtime_log.err
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc       657 May 27 09:14 GSJLDm7Ecd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyeVKDm6sYzkm.diag
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc      8192 May 27 10:52 boinc_mmap_file
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc        28 May 27 10:52 wrapper_checkpoint.txt
[2025-05-27 10:52:35] -rw-r--r--. 1 boinc boinc     20490 May 27 10:52 stderr.txt
[2025-05-27 10:52:35] HITS file was successfully produced:
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc 202346301 May 27 09:11 shared/HITS.pool.root.1
[2025-05-27 10:52:35]  *** Contents of shared directory: ***
[2025-05-27 10:52:35] total 421408
[2025-05-27 10:52:35] -rw-r--r--. 2 boinc boinc 226740291 May 27 04:25 ATLAS.root_0
[2025-05-27 10:52:35] -rw-r--r--. 2 boinc boinc     15093 May 27 04:25 start_atlas.sh
[2025-05-27 10:52:35] -rw-r--r--. 2 boinc boinc    508879 May 27 04:25 input.tar.gz
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc 202346301 May 27 09:11 HITS.pool.root.1
[2025-05-27 10:52:35] -rw-------. 1 boinc boinc   1904640 May 27 09:14 result.tar.gz
10:52:37 (12097): run_atlas exited; CPU time 65679.461101
10:52:37 (12097): called boinc_finish(0)

</stderr_txt>
]]>

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