Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:43 (24563): wrapper (7.7.26015): starting
22:52:43 (24563): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 22:52:43] Arguments: --nthreads 8
[2025-05-26 22:52:43] Threads: 8
[2025-05-26 22:52:43] Checking for CVMFS
[2025-05-26 22:52:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 22:52:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 22:52:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 22:52:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 22:52:44] 2.11.2.0 22299 20752 91888 146455 0 60 20504809 25165824 3459 130560 0 12012392 99.715 14387209 1790 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-26 22:52:44] CVMFS is ok
[2025-05-26 22:52:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 22:52:44] Checking for apptainer binary...
[2025-05-26 22:52:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 22:52:45] Running /usr/bin/apptainer --version
[2025-05-26 22:52:45] apptainer version 1.3.2-1.el7
[2025-05-26 22:52:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 22:52:55] cg-vwn422.simple-grid.lan
[2025-05-26 22:52:55] apptainer works
[2025-05-26 22:52:56] Set ATHENA_PROC_NUMBER=8
[2025-05-26 22:52:56] Set ATHENA_CORE_NUMBER=8
[2025-05-26 22:52:56] Starting ATLAS job with PandaID=6665756305
[2025-05-26 22:52:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 08:49:26]  *** The last 200 lines of the pilot log: ***
[2025-05-27 08:49:26] 2025-05-27 02:27:46,199 | INFO     | mean y: 2454505.8454258675
[2025-05-27 08:49:26] 2025-05-27 02:27:46,199 | INFO     | -- intersect: -30363981737.369614
[2025-05-27 08:49:26] 2025-05-27 02:27:46,199 | INFO     | intersect: -30363981737.369614
[2025-05-27 08:49:26] 2025-05-27 02:27:46,200 | INFO     | chi2: 5.434911953305664
[2025-05-27 08:49:26] 2025-05-27 02:27:46,200 | INFO     | sum of square deviations: 9417545878.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,203 | INFO     | sum of deviations: 168536566299.49997
[2025-05-27 08:49:26] 2025-05-27 02:27:46,204 | INFO     | mean x: 1748302946.5
[2025-05-27 08:49:26] 2025-05-27 02:27:46,204 | INFO     | mean y: 2453502.221153846
[2025-05-27 08:49:26] 2025-05-27 02:27:46,204 | INFO     | -- intersect: -31285206708.995544
[2025-05-27 08:49:26] 2025-05-27 02:27:46,204 | INFO     | intersect: -31285206708.995544
[2025-05-27 08:49:26] 2025-05-27 02:27:46,204 | INFO     | chi2: 5.438635400799151
[2025-05-27 08:49:26] 2025-05-27 02:27:46,204 | INFO     | current chi2=5.438635400799151 (change=-0.0685098033873746 %)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,205 | INFO     | right removable region: 311
[2025-05-27 08:49:26] 2025-05-27 02:27:46,205 | INFO     | sum of square deviations: 9417545878.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,208 | INFO     | sum of deviations: 62200313286.99998
[2025-05-27 08:49:26] 2025-05-27 02:27:46,208 | INFO     | mean x: 1748303251.5
[2025-05-27 08:49:26] 2025-05-27 02:27:46,208 | INFO     | mean y: 2490730.3333333335
[2025-05-27 08:49:26] 2025-05-27 02:27:46,208 | INFO     | -- intersect: -11544573799.29281
[2025-05-27 08:49:26] 2025-05-27 02:27:46,209 | INFO     | intersect: -11544573799.29281
[2025-05-27 08:49:26] 2025-05-27 02:27:46,209 | INFO     | chi2: 0.8554862205602906
[2025-05-27 08:49:26] 2025-05-27 02:27:46,209 | INFO     | current chi2=0.8554862205602906 (change=84.25942815798588 %)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,210 | INFO     | sum of square deviations: 8971993338.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,213 | INFO     | sum of deviations: 21838778360.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,213 | INFO     | mean x: 1748303404.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,213 | INFO     | mean y: 2504477.4136807816
[2025-05-27 08:49:26] 2025-05-27 02:27:46,213 | INFO     | -- intersect: -4253050459.779423
[2025-05-27 08:49:26] 2025-05-27 02:27:46,213 | INFO     | intersect: -4253050459.779423
[2025-05-27 08:49:26] 2025-05-27 02:27:46,214 | INFO     | chi2: 0.07627993284692478
[2025-05-27 08:49:26] 2025-05-27 02:27:46,214 | INFO     | current chi2=0.07627993284692478 (change=91.08344108722568 %)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,214 | INFO     | sum of square deviations: 8540720135.5
[2025-05-27 08:49:26] 2025-05-27 02:27:46,217 | INFO     | sum of deviations: 8591668708.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,217 | INFO     | mean x: 1748303556.5
[2025-05-27 08:49:26] 2025-05-27 02:27:46,217 | INFO     | mean y: 2509152.715231788
[2025-05-27 08:49:26] 2025-05-27 02:27:46,217 | INFO     | -- intersect: -1756223684.8157794
[2025-05-27 08:49:26] 2025-05-27 02:27:46,218 | INFO     | intersect: -1756223684.8157794
[2025-05-27 08:49:26] 2025-05-27 02:27:46,218 | INFO     | chi2: 0.007336329550123702
[2025-05-27 08:49:26] 2025-05-27 02:27:46,218 | INFO     | current chi2=0.007336329550123702 (change=90.38235971596104 %)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,219 | INFO     | sum of square deviations: 8123493708.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,222 | INFO     | sum of deviations: 6667646601.999998
[2025-05-27 08:49:26] 2025-05-27 02:27:46,222 | INFO     | mean x: 1748303709.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,222 | INFO     | mean y: 2509854.242424242
[2025-05-27 08:49:26] 2025-05-27 02:27:46,222 | INFO     | -- intersect: -1432472642.647797
[2025-05-27 08:49:26] 2025-05-27 02:27:46,222 | INFO     | intersect: -1432472642.647797
[2025-05-27 08:49:26] 2025-05-27 02:27:46,223 | INFO     | chi2: 0.006318941310819866
[2025-05-27 08:49:26] 2025-05-27 02:27:46,223 | INFO     | current chi2=0.006318941310819866 (change=13.867809949822671 %)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,223 | INFO     | left removable region: 40
[2025-05-27 08:49:26] 2025-05-27 02:27:46,223 | INFO     | sum of square deviations: 6171352920.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,226 | INFO     | sum of deviations: 6573207744.000001
[2025-05-27 08:49:26] 2025-05-27 02:27:46,226 | INFO     | mean x: 1748304136.0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,226 | INFO     | mean y: 2509552.4760147603
[2025-05-27 08:49:26] 2025-05-27 02:27:46,226 | INFO     | -- intersect: -1859637440.9943297
[2025-05-27 08:49:26] 2025-05-27 02:27:46,226 | INFO     | intersect: -1859637440.9943297
[2025-05-27 08:49:26] 2025-05-27 02:27:46,227 | INFO     | chi2: 0.0053278262117966
[2025-05-27 08:49:26] 2025-05-27 02:27:46,227 | INFO     | -- intersect: -1859637440.9943297
[2025-05-27 08:49:26] 2025-05-27 02:27:46,227 | INFO     | current memory leak: 1.07 B/s (using 271 data points, chi2=0.01)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | ..............................
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | . Timing measurements:
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | . get job = 0 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | . initial setup = 6 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | . payload setup = 153 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | . stage-in = 0 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | . payload execution = 19467 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,228 | INFO     | . stage-out = 3 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,229 | INFO     | . log creation = 0 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,229 | INFO     | ..............................
[2025-05-27 08:49:26] 2025-05-27 02:27:46,341 | INFO     | 
[2025-05-27 08:49:26] 2025-05-27 02:27:46,341 | INFO     | job summary report
[2025-05-27 08:49:26] 2025-05-27 02:27:46,341 | INFO     | --------------------------------------------------
[2025-05-27 08:49:26] 2025-05-27 02:27:46,341 | INFO     | PanDA job id: 6665756305
[2025-05-27 08:49:26] 2025-05-27 02:27:46,341 | INFO     | task id: 44871837
[2025-05-27 08:49:26] 2025-05-27 02:27:46,341 | INFO     | errors: (none)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | pilot state: finished 
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | transexitcode: 0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | exeerrorcode: 0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | exeerrordiag: 
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | exitcode: 0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | exitmsg: OK
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | cpuconsumptiontime: 72312 s
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | nevents: 400
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | neventsw: 0
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | pid: 3945
[2025-05-27 08:49:26] 2025-05-27 02:27:46,342 | INFO     | pgrp: 3945
[2025-05-27 08:49:26] 2025-05-27 02:27:46,343 | INFO     | corecount: 8
[2025-05-27 08:49:26] 2025-05-27 02:27:46,343 | INFO     | event service: False
[2025-05-27 08:49:26] 2025-05-27 02:27:46,343 | INFO     | sizes: {0: 2404406, 1: 2405262, 2: 2405290, 12: 2405290, 23: 2405318, 34: 2405346, 45: 2405502, 55: 2405530, 66: 2405558, 77: 2405586, 88: 2405642, 93: 2406156, 98
[2025-05-27 08:49:26] 2025-05-27 02:27:46,343 | INFO     | --------------------------------------------------
[2025-05-27 08:49:26] 2025-05-27 02:27:46,343 | INFO     | 
[2025-05-27 08:49:26] 2025-05-27 02:27:46,343 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 08:49:26] 2025-05-27 02:27:46,652 | INFO     | job 6665756305 has completed (purged errors)
[2025-05-27 08:49:26] 2025-05-27 02:27:46,652 | INFO     | overall cleanup function is called
[2025-05-27 08:49:26] 2025-05-27 02:27:47,668 | INFO     | --- collectZombieJob: --- 10, [3945]
[2025-05-27 08:49:26] 2025-05-27 02:27:47,668 | INFO     | zombie collector waiting for pid 3945
[2025-05-27 08:49:26] 2025-05-27 02:27:47,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 08:49:26] 2025-05-27 02:27:47,668 | INFO     | collected zombie processes
[2025-05-27 08:49:26] 2025-05-27 02:27:47,668 | INFO     | will attempt to kill all subprocesses of pid=3945
[2025-05-27 08:49:26] 2025-05-27 02:27:47,788 | INFO     | process IDs to be killed: [3945] (in reverse order)
[2025-05-27 08:49:26] 2025-05-27 02:27:47,978 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 08:49:26] 2025-05-27 02:27:47,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 08:49:26] 2025-05-27 02:27:47,981 | INFO     | did not find any defunct processes belonging to 3945
[2025-05-27 08:49:26] 2025-05-27 02:27:47,984 | INFO     | did not find any defunct processes belonging to 3945
[2025-05-27 08:49:26] 2025-05-27 02:27:47,984 | INFO     | ready for new job
[2025-05-27 08:49:26] 2025-05-27 02:27:47,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 08:49:26] 2025-05-27 02:27:47,986 | INFO     | **************************************
[2025-05-27 08:49:26] 2025-05-27 02:27:47,986 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 08:49:26] 2025-05-27 02:27:47,986 | INFO     | **************************************
[2025-05-27 08:49:26] 2025-05-27 02:27:47,987 | INFO     | 
[2025-05-27 08:49:26] 2025-05-27 02:27:47,990 | INFO     | pilot is running in a VM
[2025-05-27 08:49:26] 2025-05-27 02:27:47,990 | INFO     | architecture information:
[2025-05-27 08:49:26] 2025-05-27 02:27:47,999 | INFO     | executing command: cat /etc/os-release
[2025-05-27 08:49:26] 2025-05-27 02:27:48,290 | INFO     | cat /etc/os-release:
[2025-05-27 08:49:26] NAME="CentOS Linux"
[2025-05-27 08:49:26] VERSION="7 (Core)"
[2025-05-27 08:49:26] ID="centos"
[2025-05-27 08:49:26] ID_LIKE="rhel fedora"
[2025-05-27 08:49:26] VERSION_ID="7"
[2025-05-27 08:49:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 08:49:26] ANSI_COLOR="0;31"
[2025-05-27 08:49:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 08:49:26] HOME_URL="https://www.centos.org/"
[2025-05-27 08:49:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 08:49:26] 
[2025-05-27 08:49:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 08:49:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 08:49:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 08:49:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 08:49:26] 
[2025-05-27 08:49:26] 2025-05-27 02:27:48,291 | INFO     | **************************************
[2025-05-27 08:49:26] 2025-05-27 02:27:48,793 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-27 08:49:26] 2025-05-27 02:27:49,010 | INFO     | sufficient remaining disk space (496508076032 B)
[2025-05-27 08:49:26] 2025-05-27 02:27:49,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 08:49:26] 2025-05-27 02:27:49,010 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 08:49:26] 2025-05-27 02:27:49,010 | INFO     | update_server=False
[2025-05-27 08:49:26] 2025-05-27 02:27:49,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 08:49:26] 2025-05-27 02:27:49,011 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 08:49:26] 2025-05-27 02:27:49,011 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 08:49:26] 2025-05-27 02:27:49,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 08:49:26] 2025-05-27 02:27:49,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 08:49:26] 2025-05-27 02:27:49,205 | INFO     | all job control threads have been joined
[2025-05-27 08:49:26] 2025-05-27 02:27:49,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 08:49:26] 2025-05-27 02:27:49,262 | INFO     | aborting loop
[2025-05-27 08:49:26] 2025-05-27 02:27:49,507 | INFO     | all data control threads have been joined
[2025-05-27 08:49:26] 2025-05-27 02:27:49,507 | INFO     | all payload control threads have been joined
[2025-05-27 08:49:26] 2025-05-27 02:27:50,015 | INFO     | [job] retrieve thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,080 | INFO     | [payload] validate_post thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 08:49:26] 2025-05-27 02:27:50,212 | INFO     | [job] control thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,268 | INFO     | [job] job monitor thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,453 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,513 | INFO     | [payload] control thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,513 | INFO     | [data] control thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,667 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:50,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 08:49:26] 2025-05-27 02:27:50,781 | INFO     | [job] validate thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:51,071 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:51,235 | INFO     | [payload] failed_post thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:51,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 08:49:26] 2025-05-27 02:27:51,440 | INFO     | [data] copytool_in thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:52,210 | INFO     | [data] copytool_out thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:52,362 | INFO     | [job] queue monitor thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:54,757 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:27:59,876 | INFO     | job.realtimelogging is not enabled
[2025-05-27 08:49:26] 2025-05-27 02:28:00,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 08:49:26] 2025-05-27 02:28:01,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434332444480)>', '<ExcThread(monitor, started 140433745241856)>']
[2025-05-27 08:49:26] 2025-05-27 02:28:02,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 08:49:26] 2025-05-27 02:28:02,088 | INFO     | [monitor] control thread has ended
[2025-05-27 08:49:26] 2025-05-27 02:28:06,765 | INFO     | all workflow threads have been joined
[2025-05-27 08:49:26] 2025-05-27 02:28:06,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 08:49:26] 2025-05-27 02:28:06,765 | INFO     | traces error code: 0
[2025-05-27 08:49:26] 2025-05-27 02:28:06,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 08:49:26] 2025-05-27 02:28:07,039 [wrapper] ==== pilot stdout END ====
[2025-05-27 08:49:26] 2025-05-27 02:28:07,159 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 08:49:26] 2025-05-27 02:28:07,237 [wrapper] pilotpid: 28966
[2025-05-27 08:49:26] 2025-05-27 02:28:07,308 [wrapper] Pilot exit status: 0
[2025-05-27 08:49:26] 2025-05-27 02:28:07,764 [wrapper] pandaids: 6665756305
[2025-05-27 08:49:26] 2025-05-27 02:28:08,621 [wrapper] cleanup supervisor_pilot 17151 28967
[2025-05-27 08:49:26] 2025-05-27 02:28:08,679 [wrapper] Test setup, not cleaning
[2025-05-27 08:49:26] 2025-05-27 02:28:08,713 [wrapper] apfmon messages muted
[2025-05-27 08:49:26] 2025-05-27 02:28:08,775 [wrapper] ==== wrapper stdout END ====
[2025-05-27 08:49:26] 2025-05-27 02:28:08,845 [wrapper] ==== wrapper stderr END ====
[2025-05-27 08:49:26]  *** Error codes and diagnostics ***
[2025-05-27 08:49:26]     "exeErrorCode": 0,
[2025-05-27 08:49:26]     "exeErrorDiag": "",
[2025-05-27 08:49:26]     "pilotErrorCode": 0,
[2025-05-27 08:49:26]     "pilotErrorDiag": "",
[2025-05-27 08:49:26]  *** Listing of results directory ***
[2025-05-27 08:49:26] total 418068
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc      5111 May 26 07:49 queuedata.json
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc    495897 May 26 07:50 pilot3.tar.gz
[2025-05-27 08:49:26] -rwx------. 1 boinc boinc     37140 May 26 07:51 runpilot2-wrapper.sh
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc       100 May 26 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 08:49:26] -rwxr-xr-x. 1 boinc boinc      7986 May 26 22:52 run_atlas
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc       105 May 26 22:52 job.xml
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc      6371 May 26 22:52 init_data.xml
[2025-05-27 08:49:26] -rw-r--r--. 2 boinc boinc 221418461 May 26 22:52 EVNT.44871834._001848.pool.root.1
[2025-05-27 08:49:26] -rw-r--r--. 2 boinc boinc     15093 May 26 22:52 start_atlas.sh
[2025-05-27 08:49:26] drwxrwx--x. 2 boinc boinc        68 May 26 22:52 shared
[2025-05-27 08:49:26] -rw-r--r--. 2 boinc boinc    508884 May 26 22:52 input.tar.gz
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc         0 May 26 22:52 boinc_lockfile
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc      2559 May 26 22:52 pandaJob.out
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc    990402 May 26 22:56 agis_schedconf.cvmfs.json
[2025-05-27 08:49:26] drwx------. 4 boinc boinc      4096 May 26 22:56 pilot3
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc       531 May 27 04:25 boinc_task_state.xml
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc 198613937 May 27 04:25 HITS.44871837._046320.pool.root.1
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc      1016 May 27 04:26 memory_monitor_summary.json
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc   1603667 May 27 04:26 agis_ddmendpoints.agis.ALL.json
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc    437649 May 27 04:26 log.44871837._046320.job.log.tgz.1
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc        95 May 27 04:26 pilot_heartbeat.json
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc      7692 May 27 04:27 heartbeat.json
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc      4611 May 27 04:28 pilotlog.txt
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc   1682402 May 27 04:28 log.44871837._046320.job.log.1
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc       357 May 27 04:28 output.list
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc       620 May 27 04:28 runtime_log
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc   2140160 May 27 04:28 result.tar.gz
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc      8659 May 27 04:28 runtime_log.err
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc       658 May 27 04:28 6A6MDmqvfd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm91VKDmdWhiLn.diag
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc      8192 May 27 08:49 boinc_mmap_file
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc        28 May 27 08:49 wrapper_checkpoint.txt
[2025-05-27 08:49:26] -rw-r--r--. 1 boinc boinc     20494 May 27 08:49 stderr.txt
[2025-05-27 08:49:26] HITS file was successfully produced:
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc 198613937 May 27 04:25 shared/HITS.pool.root.1
[2025-05-27 08:49:26]  *** Contents of shared directory: ***
[2025-05-27 08:49:26] total 412800
[2025-05-27 08:49:26] -rw-r--r--. 2 boinc boinc 221418461 May 26 22:52 ATLAS.root_0
[2025-05-27 08:49:26] -rw-r--r--. 2 boinc boinc     15093 May 26 22:52 start_atlas.sh
[2025-05-27 08:49:26] -rw-r--r--. 2 boinc boinc    508884 May 26 22:52 input.tar.gz
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc 198613937 May 27 04:25 HITS.pool.root.1
[2025-05-27 08:49:26] -rw-------. 1 boinc boinc   2140160 May 27 04:28 result.tar.gz
08:49:28 (24563): run_atlas exited; CPU time 72592.101018
08:49:28 (24563): called boinc_finish(0)

</stderr_txt>
]]>

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