Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
20:18:36 (365210): wrapper (7.7.26015): starting
20:18:36 (365210): wrapper: running run_atlas (--nthreads 12)
[2025-05-26 20:18:36] Arguments: --nthreads 12
[2025-05-26 20:18:36] Threads: 12
[2025-05-26 20:18:36] Checking for CVMFS
[2025-05-26 20:18:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 20:18:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 20:18:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 20:18:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 20:18:36] 2.12.6.0 342168 55 47020 146453 1 55 3229954 6144000 0 130560 0 60226 99.972 72713 2749 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-26 20:18:36] CVMFS is ok
[2025-05-26 20:18:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 20:18:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-26 20:18:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-26 20:18:36] Further information can be found at the LHC@home message board.
[2025-05-26 20:18:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 20:18:36] Checking for apptainer binary...
[2025-05-26 20:18:36] apptainer is not installed, using version from CVMFS
[2025-05-26 20:18:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 20:18:36] Debian-bookworm-latest-amd64-base
[2025-05-26 20:18:36] apptainer works
[2025-05-26 20:18:36] Set ATHENA_PROC_NUMBER=12
[2025-05-26 20:18:36] Set ATHENA_CORE_NUMBER=12
[2025-05-26 20:18:36] Starting ATLAS job with PandaID=6665755591
[2025-05-26 20:18:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 21:13:09]  *** The last 200 lines of the pilot log: ***
[2025-05-26 21:13:09]  replicas=None
[2025-05-26 21:13:09]  scope=mc23_13p6TeV
[2025-05-26 21:13:09]  status=None
[2025-05-26 21:13:09]  status_code=0
[2025-05-26 21:13:09]  storage_token=
[2025-05-26 21:13:09]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6665755591/log.44871837._045912.job.log.tgz.1
[2025-05-26 21:13:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/ff/log.44871837._045912.job.log.tgz.1
[2025-05-26 21:13:09]  workdir=None
[2025-05-26 21:13:09] ]
[2025-05-26 21:13:09] 2025-05-26 19:12:45,806 | INFO     | transferring file log.44871837._045912.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6665755591/log.44871837._045912.job.log.tgz.1 to /var/lib/boinc
[2025-05-26 21:13:09] 2025-05-26 19:12:45,806 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6665755591/log.44871837._045912.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.448718
[2025-05-26 21:13:09] 2025-05-26 19:12:45,829 | INFO     | adding to output.list: log.44871837._045912.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/ff/log.44871837._045912.job.log.tg
[2025-05-26 21:13:09] 2025-05-26 19:12:45,830 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-26 21:13:09] 2025-05-26 19:12:45,830 | INFO     | summary of transferred files:
[2025-05-26 21:13:09] 2025-05-26 19:12:45,830 | INFO     |  -- lfn=log.44871837._045912.job.log.tgz.1, status_code=0, status=transferred
[2025-05-26 21:13:09] 2025-05-26 19:12:45,830 | INFO     | stage-out finished correctly
[2025-05-26 21:13:09] 2025-05-26 19:12:46,581 | INFO     | monitor loop #248: job 0:6665755591 is in state 'finished'
[2025-05-26 21:13:09] 2025-05-26 19:12:46,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 21:13:09] 2025-05-26 19:12:47,825 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-26 21:13:09] 2025-05-26 19:12:49,084 | INFO     | monitor loop #249: job 0:6665755591 is in state 'finished'
[2025-05-26 21:13:09] 2025-05-26 19:12:49,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 21:13:09] 2025-05-26 19:12:50,399 | INFO     | job 6665755591 has state=finished
[2025-05-26 21:13:09] 2025-05-26 19:12:50,399 | INFO     | preparing for final server update for job 6665755591 in state='finished'
[2025-05-26 21:13:09] 2025-05-26 19:12:51,105 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-26 21:13:09] 2025-05-26 19:12:51,105 | INFO     | this job has now completed (state=finished)
[2025-05-26 21:13:09] 2025-05-26 19:12:51,105 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-26 21:13:09] 2025-05-26 19:12:51,105 | INFO     | log transfer has been attempted: DONE
[2025-05-26 21:13:09] 2025-05-26 19:12:51,105 | INFO     | job 6665755591 has finished - writing final server update
[2025-05-26 21:13:09] 2025-05-26 19:12:51,106 | INFO     | total number of processed events: 400 (read)
[2025-05-26 21:13:09] 2025-05-26 19:12:51,107 | INFO     | executing command: lscpu
[2025-05-26 21:13:09] 2025-05-26 19:12:51,127 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 21:13:09] 2025-05-26 19:12:51,588 | INFO     | monitor loop #250: job 0:6665755591 is in state 'finished'
[2025-05-26 21:13:09] 2025-05-26 19:12:51,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 21:13:09] 2025-05-26 19:12:54,097 | INFO     | monitor loop #251: job 0:6665755591 is in state 'finished'
[2025-05-26 21:13:09] 2025-05-26 19:12:54,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 21:13:09] 2025-05-26 19:12:55,803 | INFO     | PID=368974 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-26 21:13:09] 2025-05-26 19:12:56,601 | INFO     | monitor loop #252: job 0:6665755591 is in state 'finished'
[2025-05-26 21:13:09] 2025-05-26 19:12:56,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 21:13:09] 2025-05-26 19:12:56,964 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-26 21:13:09] 2025-05-26 19:12:56,964 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6665755591/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 21:13:09] 2025-05-26 19:12:56,965 | INFO     | extracted standard info from prmon json
[2025-05-26 21:13:09] 2025-05-26 19:12:56,965 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 21:13:09] 2025-05-26 19:12:56,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 21:13:09] 2025-05-26 19:12:56,965 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 21:13:09] 2025-05-26 19:12:56,965 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 21:13:09] 2025-05-26 19:12:56,966 | INFO     | fitting pss+swap vs Time
[2025-05-26 21:13:09] 2025-05-26 19:12:56,966 | INFO     | sum of square deviations: 30165995.47826084
[2025-05-26 21:13:09] 2025-05-26 19:12:56,966 | INFO     | sum of deviations: 621323856.1739131
[2025-05-26 21:13:09] 2025-05-26 19:12:56,966 | INFO     | mean x: 1748285216.5217392
[2025-05-26 21:13:09] 2025-05-26 19:12:56,966 | INFO     | mean y: 3167861.8260869565
[2025-05-26 21:13:09] 2025-05-26 19:12:56,966 | INFO     | -- intersect: -36005964116.06405
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | intersect: -36005964116.06405
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | chi2: 0.00022666374339318137
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | -- intersect: -36005964116.06405
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | current memory leak: 20.60 B/s (using 46 data points, chi2=0.00)
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | ..............................
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . Timing measurements:
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . get job = 0 s
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . initial setup = 1 s
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . payload setup = 2 s
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . stage-in = 0 s
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . payload execution = 3224 s
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . stage-out = 0 s
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | . log creation = 0 s
[2025-05-26 21:13:09] 2025-05-26 19:12:56,967 | INFO     | ..............................
[2025-05-26 21:13:09] 2025-05-26 19:12:57,024 | INFO     | 
[2025-05-26 21:13:09] 2025-05-26 19:12:57,024 | INFO     | job summary report
[2025-05-26 21:13:09] 2025-05-26 19:12:57,024 | INFO     | --------------------------------------------------
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | PanDA job id: 6665755591
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | task id: 44871837
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | errors: (none)
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | pilot state: finished 
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | transexitcode: 0
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | exeerrorcode: 0
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | exeerrordiag: 
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | exitcode: 0
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | exitmsg: OK
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | cpuconsumptiontime: 35455 s
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | nevents: 400
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | neventsw: 0
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | pid: 375564
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | pgrp: 375564
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | corecount: 12
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | event service: False
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | sizes: {0: 2405127, 1: 2405241, 2: 2405475, 11: 2405503, 3230: 2430998, 3231: 2439953, 3233: 2440137, 3243: 2440307}
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | --------------------------------------------------
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | 
[2025-05-26 21:13:09] 2025-05-26 19:12:57,025 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-05-26 21:13:09] 2025-05-26 19:12:57,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,038 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,038 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 21:13:09] 2025-05-26 19:12:57,039 | INFO     | job 6665755591 has completed (purged errors)
[2025-05-26 21:13:09] 2025-05-26 19:12:57,040 | INFO     | overall cleanup function is called
[2025-05-26 21:13:09] 2025-05-26 19:12:58,048 | INFO     | --- collectZombieJob: --- 10, [375564]
[2025-05-26 21:13:09] 2025-05-26 19:12:58,048 | INFO     | zombie collector waiting for pid 375564
[2025-05-26 21:13:09] 2025-05-26 19:12:58,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 21:13:09] 2025-05-26 19:12:58,048 | INFO     | collected zombie processes
[2025-05-26 21:13:09] 2025-05-26 19:12:58,048 | INFO     | will attempt to kill all subprocesses of pid=375564
[2025-05-26 21:13:09] 2025-05-26 19:12:58,094 | INFO     | process IDs to be killed: [375564] (in reverse order)
[2025-05-26 21:13:09] 2025-05-26 19:12:58,118 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 21:13:09] 2025-05-26 19:12:58,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 21:13:09] 2025-05-26 19:12:58,120 | INFO     | did not find any defunct processes belonging to 375564
[2025-05-26 21:13:09] 2025-05-26 19:12:58,121 | INFO     | did not find any defunct processes belonging to 375564
[2025-05-26 21:13:09] 2025-05-26 19:12:58,121 | INFO     | ready for new job
[2025-05-26 21:13:09] 2025-05-26 19:12:58,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 21:13:09] 2025-05-26 19:12:58,122 | INFO     | **************************************
[2025-05-26 21:13:09] 2025-05-26 19:12:58,122 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 21:13:09] 2025-05-26 19:12:58,122 | INFO     | **************************************
[2025-05-26 21:13:09] 2025-05-26 19:12:58,122 | INFO     | 
[2025-05-26 21:13:09] 2025-05-26 19:12:58,122 | INFO     | architecture information:
[2025-05-26 21:13:09] 2025-05-26 19:12:58,122 | INFO     | executing command: cat /etc/os-release
[2025-05-26 21:13:09] 2025-05-26 19:12:58,132 | INFO     | cat /etc/os-release:
[2025-05-26 21:13:09] NAME="CentOS Linux"
[2025-05-26 21:13:09] VERSION="7 (Core)"
[2025-05-26 21:13:09] ID="centos"
[2025-05-26 21:13:09] ID_LIKE="rhel fedora"
[2025-05-26 21:13:09] VERSION_ID="7"
[2025-05-26 21:13:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 21:13:09] ANSI_COLOR="0;31"
[2025-05-26 21:13:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 21:13:09] HOME_URL="https://www.centos.org/"
[2025-05-26 21:13:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 21:13:09] 
[2025-05-26 21:13:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 21:13:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 21:13:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 21:13:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 21:13:09] 
[2025-05-26 21:13:09] 2025-05-26 19:12:58,132 | INFO     | **************************************
[2025-05-26 21:13:09] 2025-05-26 19:12:58,635 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | INFO     | sufficient remaining disk space (821671493632 B)
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | INFO     | update_server=False
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 21:13:09] 2025-05-26 19:12:58,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 21:13:09] 2025-05-26 19:12:58,648 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 21:13:09] 2025-05-26 19:12:58,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 21:13:09] 2025-05-26 19:12:58,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 21:13:09] 2025-05-26 19:12:58,895 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 21:13:09] 2025-05-26 19:12:59,104 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-26 21:13:09] 2025-05-26 19:12:59,104 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-26 21:13:09] 2025-05-26 19:12:59,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 21:13:09] 2025-05-26 19:12:59,104 | INFO     | will abort loop
[2025-05-26 21:13:09] 2025-05-26 19:12:59,590 | INFO     | all data control threads have been joined
[2025-05-26 21:13:09] 2025-05-26 19:12:59,649 | INFO     | [job] retrieve thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:12:59,653 | INFO     | [job] queue monitor thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:12:59,691 | INFO     | all payload control threads have been joined
[2025-05-26 21:13:09] 2025-05-26 19:13:00,057 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,109 | INFO     | [job] job monitor thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,121 | INFO     | [payload] validate_post thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,193 | INFO     | [job] validate thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,216 | INFO     | all job control threads have been joined
[2025-05-26 21:13:09] 2025-05-26 19:13:00,226 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,231 | INFO     | [data] copytool_in thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,269 | INFO     | [payload] failed_post thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,595 | INFO     | [data] control thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,680 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,693 | INFO     | [payload] control thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,813 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:00,897 | INFO     | [data] copytool_out thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:01,221 | INFO     | [job] control thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:02,653 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 21:13:09] 2025-05-26 19:13:03,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990206850880)>', '<ExcThread(monitor, started 139989669103360)>']
[2025-05-26 21:13:09] 2025-05-26 19:13:04,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 21:13:09] 2025-05-26 19:13:04,677 | INFO     | [monitor] control thread has ended
[2025-05-26 21:13:09] 2025-05-26 19:13:08,949 | INFO     | all workflow threads have been joined
[2025-05-26 21:13:09] 2025-05-26 19:13:08,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 21:13:09] 2025-05-26 19:13:08,949 | INFO     | traces error code: 0
[2025-05-26 21:13:09] 2025-05-26 19:13:08,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 21:13:09] 2025-05-26 19:13:09,024 [wrapper] ==== pilot stdout END ====
[2025-05-26 21:13:09] 2025-05-26 19:13:09,025 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 21:13:09] 2025-05-26 19:13:09,026 [wrapper] pilotpid: 368974
[2025-05-26 21:13:09] 2025-05-26 19:13:09,028 [wrapper] Pilot exit status: 0
[2025-05-26 21:13:09] 2025-05-26 19:13:09,033 [wrapper] pandaids: 6665755591
[2025-05-26 21:13:09] 2025-05-26 19:13:09,047 [wrapper] cleanup supervisor_pilot  385235 368975
[2025-05-26 21:13:09] 2025-05-26 19:13:09,048 [wrapper] Test setup, not cleaning
[2025-05-26 21:13:09] 2025-05-26 19:13:09,049 [wrapper] apfmon messages muted
[2025-05-26 21:13:09] 2025-05-26 19:13:09,051 [wrapper] ==== wrapper stdout END ====
[2025-05-26 21:13:09] 2025-05-26 19:13:09,052 [wrapper] ==== wrapper stderr END ====
[2025-05-26 21:13:09]  *** Error codes and diagnostics ***
[2025-05-26 21:13:09]     "exeErrorCode": 0,
[2025-05-26 21:13:09]     "exeErrorDiag": "",
[2025-05-26 21:13:09]     "pilotErrorCode": 0,
[2025-05-26 21:13:09]     "pilotErrorDiag": "",
[2025-05-26 21:13:09]  *** Listing of results directory ***
[2025-05-26 21:13:09] total 421748
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc    495897 May 26 07:08 pilot3.tar.gz
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc      5111 May 26 07:18 queuedata.json
[2025-05-26 21:13:09] -rwx------ 1 boinc boinc     37140 May 26 07:19 runpilot2-wrapper.sh
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc       100 May 26 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 21:13:09] -rwxr-xr-x 1 boinc boinc      7986 May 26 20:18 run_atlas
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc       105 May 26 20:18 job.xml
[2025-05-26 21:13:09] -rw-r--r-- 2 boinc boinc     15093 May 26 20:18 start_atlas.sh
[2025-05-26 21:13:09] drwxrwx--x 2 boinc boinc      4096 May 26 20:18 shared
[2025-05-26 21:13:09] -rw-r--r-- 2 boinc boinc    508880 May 26 20:18 input.tar.gz
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc      6727 May 26 20:18 init_data.xml
[2025-05-26 21:13:09] -rw-r--r-- 2 boinc boinc 225802576 May 26 20:18 EVNT.44871834._001832.pool.root.1
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc         0 May 26 20:18 boinc_lockfile
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc      2559 May 26 20:18 pandaJob.out
[2025-05-26 21:13:09] -rw------- 1 boinc boinc    990410 May 26 20:18 agis_schedconf.cvmfs.json
[2025-05-26 21:13:09] -rw------- 1 boinc boinc   1603667 May 26 20:18 agis_ddmendpoints.agis.ALL.json
[2025-05-26 21:13:09] drwx------ 4 boinc boinc      4096 May 26 20:18 pilot3
[2025-05-26 21:13:09] -rw------- 1 boinc boinc        95 May 26 21:11 pilot_heartbeat.json
[2025-05-26 21:13:09] -rw------- 1 boinc boinc 200874678 May 26 21:12 HITS.44871837._045912.pool.root.1
[2025-05-26 21:13:09] -rw------- 1 boinc boinc      1011 May 26 21:12 memory_monitor_summary.json
[2025-05-26 21:13:09] -rw------- 1 boinc boinc    342419 May 26 21:12 log.44871837._045912.job.log.tgz.1
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc       529 May 26 21:12 boinc_task_state.xml
[2025-05-26 21:13:09] -rw------- 1 boinc boinc      7693 May 26 21:12 heartbeat.json
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc      8192 May 26 21:13 boinc_mmap_file
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc        27 May 26 21:13 wrapper_checkpoint.txt
[2025-05-26 21:13:09] -rw------- 1 boinc boinc      4670 May 26 21:13 pilotlog.txt
[2025-05-26 21:13:09] -rw------- 1 boinc boinc    334344 May 26 21:13 log.44871837._045912.job.log.1
[2025-05-26 21:13:09] -rw------- 1 boinc boinc       357 May 26 21:13 output.list
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc       620 May 26 21:13 runtime_log
[2025-05-26 21:13:09] -rw------- 1 boinc boinc    696320 May 26 21:13 result.tar.gz
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc      8960 May 26 21:13 runtime_log.err
[2025-05-26 21:13:09] -rw------- 1 boinc boinc       705 May 26 21:13 FEwMDmsQfd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrxVKDmK6LLZm.diag
[2025-05-26 21:13:09] -rw-r--r-- 1 boinc boinc     22061 May 26 21:13 stderr.txt
[2025-05-26 21:13:09] HITS file was successfully produced:
[2025-05-26 21:13:09] -rw------- 1 boinc boinc 200874678 May 26 21:12 shared/HITS.pool.root.1
[2025-05-26 21:13:09]  *** Contents of shared directory: ***
[2025-05-26 21:13:09] total 417884
[2025-05-26 21:13:09] -rw-r--r-- 2 boinc boinc     15093 May 26 20:18 start_atlas.sh
[2025-05-26 21:13:09] -rw-r--r-- 2 boinc boinc    508880 May 26 20:18 input.tar.gz
[2025-05-26 21:13:09] -rw-r--r-- 2 boinc boinc 225802576 May 26 20:18 ATLAS.root_0
[2025-05-26 21:13:09] -rw------- 1 boinc boinc 200874678 May 26 21:12 HITS.pool.root.1
[2025-05-26 21:13:09] -rw------- 1 boinc boinc    696320 May 26 21:13 result.tar.gz
21:13:10 (365210): run_atlas exited; CPU time 35470.310011
21:13:10 (365210): called boinc_finish(0)

</stderr_txt>
]]>

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