Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:18:09 (26731): wrapper (7.7.26015): starting
21:18:09 (26731): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 21:18:09] Arguments: --nthreads 8
[2025-05-26 21:18:09] Threads: 8
[2025-05-26 21:18:09] Checking for CVMFS
[2025-05-26 21:18:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 21:18:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 21:18:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 21:18:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 21:18:12] 2.11.2.0 16148 20665 93728 146454 2 113 22128784 25165824 3379 130560 0 11839966 99.758 13618023 1666 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-26 21:18:12] CVMFS is ok
[2025-05-26 21:18:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 21:18:12] Checking for apptainer binary...
[2025-05-26 21:18:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 21:18:12] Running /usr/bin/apptainer --version
[2025-05-26 21:18:12] apptainer version 1.3.2-1.el7
[2025-05-26 21:18:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 21:34:50] cg-vwn372.simple-grid.lan
[2025-05-26 21:34:50] apptainer works
[2025-05-26 21:34:50] Set ATHENA_PROC_NUMBER=8
[2025-05-26 21:34:50] Set ATHENA_CORE_NUMBER=8
[2025-05-26 21:34:50] Starting ATLAS job with PandaID=6665755535
[2025-05-26 21:34:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 02:54:59]  *** The last 200 lines of the pilot log: ***
[2025-05-27 02:54:59] 2025-05-27 00:54:39,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 02:54:59] 2025-05-27 00:54:39,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 02:54:59] 2025-05-27 00:54:39,258 | INFO     | fitting pss+swap vs Time
[2025-05-27 02:54:59] 2025-05-27 00:54:39,259 | INFO     | sum of square deviations: 9237596457.5
[2025-05-27 02:54:59] 2025-05-27 00:54:39,262 | INFO     | sum of deviations: -8253611283.000006
[2025-05-27 02:54:59] 2025-05-27 00:54:39,263 | INFO     | mean x: 1748297813.5
[2025-05-27 02:54:59] 2025-05-27 00:54:39,263 | INFO     | mean y: 2504581.0258064517
[2025-05-27 02:54:59] 2025-05-27 00:54:39,263 | INFO     | -- intersect: 1564574392.7929482
[2025-05-27 02:54:59] 2025-05-27 00:54:39,263 | INFO     | intersect: 1564574392.7929482
[2025-05-27 02:54:59] 2025-05-27 00:54:39,263 | INFO     | chi2: 2.489254693897184
[2025-05-27 02:54:59] 2025-05-27 00:54:39,264 | INFO     | sum of square deviations: 8797783560.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,267 | INFO     | sum of deviations: 12458925113.999994
[2025-05-27 02:54:59] 2025-05-27 00:54:39,267 | INFO     | mean x: 1748297661.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,267 | INFO     | mean y: 2511669.2196721314
[2025-05-27 02:54:59] 2025-05-27 00:54:39,267 | INFO     | -- intersect: -2473328920.268568
[2025-05-27 02:54:59] 2025-05-27 00:54:39,267 | INFO     | intersect: -2473328920.268568
[2025-05-27 02:54:59] 2025-05-27 00:54:39,268 | INFO     | chi2: 1.717017045056403
[2025-05-27 02:54:59] 2025-05-27 00:54:39,268 | INFO     | current chi2=1.717017045056403 (change=31.022845943970623 %)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,268 | INFO     | sum of square deviations: 8372156975.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,272 | INFO     | sum of deviations: 12176520520.499998
[2025-05-27 02:54:59] 2025-05-27 00:54:39,272 | INFO     | mean x: 1748297508.5
[2025-05-27 02:54:59] 2025-05-27 00:54:39,272 | INFO     | mean y: 2511568.0233333334
[2025-05-27 02:54:59] 2025-05-27 00:54:39,272 | INFO     | -- intersect: -2540223900.4775147
[2025-05-27 02:54:59] 2025-05-27 00:54:39,272 | INFO     | intersect: -2540223900.4775147
[2025-05-27 02:54:59] 2025-05-27 00:54:39,273 | INFO     | chi2: 1.717285842474675
[2025-05-27 02:54:59] 2025-05-27 00:54:39,273 | INFO     | current chi2=1.717285842474675 (change=-0.015654906807473515 %)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,273 | INFO     | right removable region: 299
[2025-05-27 02:54:59] 2025-05-27 00:54:39,274 | INFO     | sum of square deviations: 8797783560.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,277 | INFO     | sum of deviations: -59325798331.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,277 | INFO     | mean x: 1748297966.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,278 | INFO     | mean y: 2522175.806557377
[2025-05-27 02:54:59] 2025-05-27 00:54:39,278 | INFO     | -- intersect: 11791761118.326473
[2025-05-27 02:54:59] 2025-05-27 00:54:39,278 | INFO     | intersect: 11791761118.326473
[2025-05-27 02:54:59] 2025-05-27 00:54:39,278 | INFO     | chi2: 0.9886816273900415
[2025-05-27 02:54:59] 2025-05-27 00:54:39,279 | INFO     | current chi2=0.9886816273900415 (change=60.28202217258216 %)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,279 | INFO     | sum of square deviations: 8372156975.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,282 | INFO     | sum of deviations: -58809377333.000015
[2025-05-27 02:54:59] 2025-05-27 00:54:39,282 | INFO     | mean x: 1748298118.5
[2025-05-27 02:54:59] 2025-05-27 00:54:39,282 | INFO     | mean y: 2521971.7933333335
[2025-05-27 02:54:59] 2025-05-27 00:54:39,283 | INFO     | -- intersect: 12283266832.22286
[2025-05-27 02:54:59] 2025-05-27 00:54:39,283 | INFO     | intersect: 12283266832.22286
[2025-05-27 02:54:59] 2025-05-27 00:54:39,283 | INFO     | chi2: 0.9727809922859468
[2025-05-27 02:54:59] 2025-05-27 00:54:39,284 | INFO     | current chi2=0.9727809922859468 (change=1.6082664695681421 %)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,284 | INFO     | left removable region: 20
[2025-05-27 02:54:59] 2025-05-27 00:54:39,284 | INFO     | sum of square deviations: 6734191380.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,287 | INFO     | sum of deviations: -17903384100.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,287 | INFO     | mean x: 1748298088.0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,287 | INFO     | mean y: 2521936.2616487457
[2025-05-27 02:54:59] 2025-05-27 00:54:39,287 | INFO     | -- intersect: 4650511639.037159
[2025-05-27 02:54:59] 2025-05-27 00:54:39,287 | INFO     | intersect: 4650511639.037159
[2025-05-27 02:54:59] 2025-05-27 00:54:39,288 | INFO     | chi2: 0.12974331355636928
[2025-05-27 02:54:59] 2025-05-27 00:54:39,288 | INFO     | -- intersect: 4650511639.037159
[2025-05-27 02:54:59] 2025-05-27 00:54:39,288 | INFO     | current memory leak: -2.66 B/s (using 279 data points, chi2=0.13)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | ..............................
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . Timing measurements:
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . get job = 0 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . initial setup = 5 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . payload setup = 16 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . stage-in = 0 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . payload execution = 18896 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . stage-out = 1 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | . log creation = 0 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,289 | INFO     | ..............................
[2025-05-27 02:54:59] 2025-05-27 00:54:39,433 | INFO     | 
[2025-05-27 02:54:59] 2025-05-27 00:54:39,433 | INFO     | job summary report
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | --------------------------------------------------
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | PanDA job id: 6665755535
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | task id: 44871837
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | errors: (none)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | pilot state: finished 
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | transexitcode: 0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,434 | INFO     | exeerrorcode: 0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | exeerrordiag: 
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | exitcode: 0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | exitmsg: OK
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | cpuconsumptiontime: 71341 s
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | nevents: 400
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | neventsw: 0
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | pid: 15396
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | pgrp: 15396
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | corecount: 8
[2025-05-27 02:54:59] 2025-05-27 00:54:39,435 | INFO     | event service: False
[2025-05-27 02:54:59] 2025-05-27 00:54:39,436 | INFO     | sizes: {0: 2405057, 1: 2405256, 12: 2405256, 23: 2405284, 34: 2405312, 44: 2405340, 55: 2405496, 66: 2405524, 77: 2405552, 81: 2405814, 87: 2405842, 18916: 2438092
[2025-05-27 02:54:59] 2025-05-27 00:54:39,436 | INFO     | --------------------------------------------------
[2025-05-27 02:54:59] 2025-05-27 00:54:39,436 | INFO     | 
[2025-05-27 02:54:59] 2025-05-27 00:54:39,436 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 02:54:59] 2025-05-27 00:54:39,464 | INFO     | job 6665755535 has completed (purged errors)
[2025-05-27 02:54:59] 2025-05-27 00:54:39,464 | INFO     | overall cleanup function is called
[2025-05-27 02:54:59] 2025-05-27 00:54:40,472 | INFO     | --- collectZombieJob: --- 10, [15396]
[2025-05-27 02:54:59] 2025-05-27 00:54:40,472 | INFO     | zombie collector waiting for pid 15396
[2025-05-27 02:54:59] 2025-05-27 00:54:40,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 02:54:59] 2025-05-27 00:54:40,472 | INFO     | collected zombie processes
[2025-05-27 02:54:59] 2025-05-27 00:54:40,473 | INFO     | will attempt to kill all subprocesses of pid=15396
[2025-05-27 02:54:59] 2025-05-27 00:54:40,587 | INFO     | process IDs to be killed: [15396] (in reverse order)
[2025-05-27 02:54:59] 2025-05-27 00:54:40,755 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 02:54:59] 2025-05-27 00:54:40,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 02:54:59] 2025-05-27 00:54:40,759 | INFO     | did not find any defunct processes belonging to 15396
[2025-05-27 02:54:59] 2025-05-27 00:54:40,762 | INFO     | did not find any defunct processes belonging to 15396
[2025-05-27 02:54:59] 2025-05-27 00:54:40,762 | INFO     | ready for new job
[2025-05-27 02:54:59] 2025-05-27 00:54:40,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 02:54:59] 2025-05-27 00:54:40,764 | INFO     | **************************************
[2025-05-27 02:54:59] 2025-05-27 00:54:40,764 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 02:54:59] 2025-05-27 00:54:40,764 | INFO     | **************************************
[2025-05-27 02:54:59] 2025-05-27 00:54:40,764 | INFO     | 
[2025-05-27 02:54:59] 2025-05-27 00:54:40,765 | INFO     | pilot is running in a VM
[2025-05-27 02:54:59] 2025-05-27 00:54:40,766 | INFO     | architecture information:
[2025-05-27 02:54:59] 2025-05-27 00:54:40,766 | INFO     | executing command: cat /etc/os-release
[2025-05-27 02:54:59] 2025-05-27 00:54:40,791 | INFO     | cat /etc/os-release:
[2025-05-27 02:54:59] NAME="CentOS Linux"
[2025-05-27 02:54:59] VERSION="7 (Core)"
[2025-05-27 02:54:59] ID="centos"
[2025-05-27 02:54:59] ID_LIKE="rhel fedora"
[2025-05-27 02:54:59] VERSION_ID="7"
[2025-05-27 02:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 02:54:59] ANSI_COLOR="0;31"
[2025-05-27 02:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 02:54:59] HOME_URL="https://www.centos.org/"
[2025-05-27 02:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 02:54:59] 
[2025-05-27 02:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 02:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 02:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 02:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 02:54:59] 
[2025-05-27 02:54:59] 2025-05-27 00:54:40,791 | INFO     | **************************************
[2025-05-27 02:54:59] 2025-05-27 00:54:41,295 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-27 02:54:59] 2025-05-27 00:54:41,337 | INFO     | sufficient remaining disk space (494690893824 B)
[2025-05-27 02:54:59] 2025-05-27 00:54:41,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 02:54:59] 2025-05-27 00:54:41,337 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 02:54:59] 2025-05-27 00:54:41,338 | INFO     | update_server=False
[2025-05-27 02:54:59] 2025-05-27 00:54:41,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 02:54:59] 2025-05-27 00:54:41,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 02:54:59] 2025-05-27 00:54:41,339 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 02:54:59] 2025-05-27 00:54:41,339 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 02:54:59] 2025-05-27 00:54:41,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 02:54:59] 2025-05-27 00:54:41,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 02:54:59] 2025-05-27 00:54:41,375 | INFO     | all data control threads have been joined
[2025-05-27 02:54:59] 2025-05-27 00:54:41,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 02:54:59] 2025-05-27 00:54:41,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 02:54:59] 2025-05-27 00:54:41,835 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-27 02:54:59] 2025-05-27 00:54:41,835 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-27 02:54:59] 2025-05-27 00:54:41,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 02:54:59] 2025-05-27 00:54:41,835 | INFO     | will abort loop
[2025-05-27 02:54:59] 2025-05-27 00:54:42,085 | INFO     | all job control threads have been joined
[2025-05-27 02:54:59] 2025-05-27 00:54:42,344 | INFO     | [job] queue monitor thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:42,344 | INFO     | [job] retrieve thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:42,378 | INFO     | [data] control thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:42,765 | INFO     | all payload control threads have been joined
[2025-05-27 02:54:59] 2025-05-27 00:54:42,837 | INFO     | [job] job monitor thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:42,990 | INFO     | [payload] validate_post thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,090 | INFO     | [job] control thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,100 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,179 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,353 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,364 | INFO     | [job] validate thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,419 | INFO     | [data] copytool_out thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,529 | INFO     | [payload] failed_post thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,771 | INFO     | [payload] control thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:43,775 | INFO     | [data] copytool_in thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:45,699 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:52,162 | INFO     | job.realtimelogging is not enabled
[2025-05-27 02:54:59] 2025-05-27 00:54:53,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 02:54:59] 2025-05-27 00:54:53,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679772342080)>', '<ExcThread(monitor, started 140678893922048)>']
[2025-05-27 02:54:59] 2025-05-27 00:54:53,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 02:54:59] 2025-05-27 00:54:53,396 | INFO     | [monitor] control thread has ended
[2025-05-27 02:54:59] 2025-05-27 00:54:58,364 | INFO     | all workflow threads have been joined
[2025-05-27 02:54:59] 2025-05-27 00:54:58,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 02:54:59] 2025-05-27 00:54:58,364 | INFO     | traces error code: 0
[2025-05-27 02:54:59] 2025-05-27 00:54:58,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 02:54:59] 2025-05-27 00:54:58,595 [wrapper] ==== pilot stdout END ====
[2025-05-27 02:54:59] 2025-05-27 00:54:58,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 02:54:59] 2025-05-27 00:54:58,665 [wrapper] pilotpid: 6796
[2025-05-27 02:54:59] 2025-05-27 00:54:58,682 [wrapper] Pilot exit status: 0
[2025-05-27 02:54:59] 2025-05-27 00:54:58,729 [wrapper] pandaids: 6665755535
[2025-05-27 02:54:59] 2025-05-27 00:54:58,775 [wrapper] cleanup supervisor_pilot 27810 6797
[2025-05-27 02:54:59] 2025-05-27 00:54:58,779 [wrapper] Test setup, not cleaning
[2025-05-27 02:54:59] 2025-05-27 00:54:58,782 [wrapper] apfmon messages muted
[2025-05-27 02:54:59] 2025-05-27 00:54:58,786 [wrapper] ==== wrapper stdout END ====
[2025-05-27 02:54:59] 2025-05-27 00:54:58,789 [wrapper] ==== wrapper stderr END ====
[2025-05-27 02:54:59]  *** Error codes and diagnostics ***
[2025-05-27 02:54:59]     "exeErrorCode": 0,
[2025-05-27 02:54:59]     "exeErrorDiag": "",
[2025-05-27 02:54:59]     "pilotErrorCode": 0,
[2025-05-27 02:54:59]     "pilotErrorDiag": "",
[2025-05-27 02:54:59]  *** Listing of results directory ***
[2025-05-27 02:54:59] total 417484
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc    495897 May 26 07:08 pilot3.tar.gz
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc      5111 May 26 07:14 queuedata.json
[2025-05-27 02:54:59] -rwx------. 1 boinc boinc     37140 May 26 07:15 runpilot2-wrapper.sh
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc       100 May 26 21:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 02:54:59] -rwxr-xr-x. 1 boinc boinc      7986 May 26 21:18 run_atlas
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc       105 May 26 21:18 job.xml
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc      6372 May 26 21:18 init_data.xml
[2025-05-27 02:54:59] -rw-r--r--. 2 boinc boinc 221288594 May 26 21:18 EVNT.44871834._001830.pool.root.1
[2025-05-27 02:54:59] -rw-r--r--. 2 boinc boinc     15093 May 26 21:18 start_atlas.sh
[2025-05-27 02:54:59] drwxrwx--x. 2 boinc boinc        68 May 26 21:18 shared
[2025-05-27 02:54:59] -rw-r--r--. 2 boinc boinc    508883 May 26 21:18 input.tar.gz
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc         0 May 26 21:18 boinc_lockfile
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc      2555 May 26 21:34 pandaJob.out
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc    990410 May 26 21:37 agis_schedconf.cvmfs.json
[2025-05-27 02:54:59] drwx------. 4 boinc boinc      4096 May 26 21:37 pilot3
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc 198309327 May 27 02:53 HITS.44871837._045856.pool.root.1
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc       531 May 27 02:54 boinc_task_state.xml
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc        95 May 27 02:54 pilot_heartbeat.json
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc      1023 May 27 02:54 memory_monitor_summary.json
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc   1603667 May 27 02:54 agis_ddmendpoints.agis.ALL.json
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc    412835 May 27 02:54 log.44871837._045856.job.log.tgz.1
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc      7692 May 27 02:54 heartbeat.json
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc        28 May 27 02:54 wrapper_checkpoint.txt
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc      8192 May 27 02:54 boinc_mmap_file
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc      4798 May 27 02:54 pilotlog.txt
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc   1626973 May 27 02:54 log.44871837._045856.job.log.1
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc       357 May 27 02:54 output.list
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc       620 May 27 02:54 runtime_log
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc   2058240 May 27 02:54 result.tar.gz
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc      8673 May 27 02:54 runtime_log.err
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc       658 May 27 02:54 FlDMDmiMfd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6wVKDm84Dwqn.diag
[2025-05-27 02:54:59] -rw-r--r--. 1 boinc boinc     20478 May 27 02:54 stderr.txt
[2025-05-27 02:54:59] HITS file was successfully produced:
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc 198309327 May 27 02:53 shared/HITS.pool.root.1
[2025-05-27 02:54:59]  *** Contents of shared directory: ***
[2025-05-27 02:54:59] total 412296
[2025-05-27 02:54:59] -rw-r--r--. 2 boinc boinc 221288594 May 26 21:18 ATLAS.root_0
[2025-05-27 02:54:59] -rw-r--r--. 2 boinc boinc     15093 May 26 21:18 start_atlas.sh
[2025-05-27 02:54:59] -rw-r--r--. 2 boinc boinc    508883 May 26 21:18 input.tar.gz
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc 198309327 May 27 02:53 HITS.pool.root.1
[2025-05-27 02:54:59] -rw-------. 1 boinc boinc   2058240 May 27 02:54 result.tar.gz
02:55:00 (26731): run_atlas exited; CPU time 71597.388824
02:55:00 (26731): called boinc_finish(0)

</stderr_txt>
]]>

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