Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-29 23:03:35 (17800): Detected: vboxwrapper 26206
2025-05-29 23:03:35 (17800): Detected: BOINC client v7.16.20
2025-05-29 23:03:36 (17800): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-29 23:03:36 (17800): Successfully copied 'init_data.xml' to the shared directory.
2025-05-29 23:03:37 (17800): Create VM. (boinc_844ebee55f849018, slot#1)
2025-05-29 23:03:37 (17800): Setting Memory Size for VM. (4400MB)
2025-05-29 23:03:38 (17800): Setting CPU Count for VM. (4)
2025-05-29 23:03:38 (17800): Setting Chipset Options for VM.
2025-05-29 23:03:38 (17800): Setting Graphics Controller Options for VM.
2025-05-29 23:03:38 (17800): Setting Boot Options for VM.
2025-05-29 23:03:39 (17800): Setting Network Configuration for NAT.
2025-05-29 23:03:39 (17800): Enabling VM Network Access.
2025-05-29 23:03:39 (17800): Disabling USB Support for VM.
2025-05-29 23:03:39 (17800): Disabling COM Port Support for VM.
2025-05-29 23:03:40 (17800): Disabling LPT Port Support for VM.
2025-05-29 23:03:40 (17800): Disabling Audio Support for VM.
2025-05-29 23:03:40 (17800): Disabling Clipboard Support for VM.
2025-05-29 23:03:41 (17800): Disabling Drag and Drop Support for VM.
2025-05-29 23:03:41 (17800): Adding storage controller(s) to VM.
2025-05-29 23:03:41 (17800): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-29 23:03:42 (17800): Adding VirtualBox Guest Additions to VM.
2025-05-29 23:03:42 (17800): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-29 23:03:43 (17800): forwarding host port 50902 to guest port 80
2025-05-29 23:03:43 (17800): Enabling remote desktop for VM.
2025-05-29 23:03:43 (17800): Required extension pack not installed, remote desktop not enabled.
2025-05-29 23:03:43 (17800): Enabling shared directory for VM.
2025-05-29 23:03:44 (17800): Starting VM using VBoxManage interface. (boinc_844ebee55f849018, slot#1)
2025-05-29 23:03:47 (17800): Successfully started VM. (PID = '19872')
2025-05-29 23:03:47 (17800): Reporting VM Process ID to BOINC.
2025-05-29 23:03:47 (17800): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-29 23:03:47 (17800): Guest Log: CPUID EDX: 0x178bfbff
2025-05-29 23:03:47 (17800): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-29 23:03:47 (17800): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-29 23:03:47 (17800): Detected: Web Application Enabled (http://localhost:50902)
2025-05-29 23:03:47 (17800): Preference change detected
2025-05-29 23:03:47 (17800): Setting CPU throttle for VM. (90%)
2025-05-29 23:03:47 (17800): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-29 23:03:49 (17800): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-29 23:03:49 (17800): Guest Log: BIOS: Booting from Hard Disk...
2025-05-29 23:03:52 (17800): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-29 23:03:52 (17800): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-29 23:03:52 (17800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-29 23:03:58 (17800): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-29 23:03:58 (17800): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-29 23:04:03 (17800): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.000115 main     Log opened 2025-05-29T23:04:01.688376000Z
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.000186 main     OS Product: Linux
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.000213 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.000235 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.000257 main     Process ID: 1307
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2025-05-29 23:04:03 (17800): Guest Log: 00:00:00.001525 main     5.2.32 r132073 started. Verbose level = 0
2025-05-29 23:04:03 (17800): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-29 23:04:03 (17800): Guest Log: [INFO] Mounting shared directory
2025-05-29 23:04:03 (17800): Guest Log: [INFO] Checking for init_data.xml
2025-05-29 23:04:07 (17800): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-29 23:04:07 (17800): Guest Log: [INFO] Detected branch: prod
2025-05-29 23:04:07 (17800): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-29 23:04:07 (17800): Guest Log: Copying input files
2025-05-29 23:04:09 (17800): Guest Log: Copied input files into RunAtlas.
2025-05-29 23:04:10 (17800): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-29 23:04:10 (17800): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-29 23:04:10 (17800): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-29 23:04:10 (17800): Guest Log: Further information can be found at the LHC@home message board.
2025-05-29 23:04:13 (17800): Guest Log: 00:00:10.006219 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 233 173 000ns (GuestNow=1 748 581 452 925 776 000 ns GuestLast=1 748 559 841 692 603 000 ns fSetTimeLastLoop=true )
2025-05-29 23:04:18 (17800): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-29 23:04:18 (17800): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-29 23:04:18 (17800): Guest Log: 2.6.3.0 1604 0 32228 146587 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-29 23:04:20 (17800): Guest Log: copied the webapp to /var/www
2025-05-29 23:04:20 (17800): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-29 23:04:20 (17800): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-29 23:04:20 (17800): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-29 23:04:20 (17800): Guest Log:  *** Starting ATLAS job. (PandaID=6665754175 taskID=44871837) ***
2025-05-30 00:45:54 (17800): Status Report: Elapsed Time: '6000.683466'
2025-05-30 00:45:54 (17800): Status Report: CPU Time: '19138.531250'
2025-05-30 02:27:44 (17800): Status Report: Elapsed Time: '12000.683466'
2025-05-30 02:27:44 (17800): Status Report: CPU Time: '40940.468750'
2025-05-30 02:54:02 (17800): Guest Log:  *** Job finished ***
2025-05-30 02:54:02 (17800): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:53:54,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:53:55,034 | INFO     | [job] queue monitor thread has finished
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:53:55,111 | INFO     | [data] queue_monitor thread has finished
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:53:55,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671883843392)>', '<ExcThread(monitor, started 139670851675904)>']
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:53:56,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:53:56,713 | INFO     | [monitor] control thread has ended
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:00,994 | INFO     | all workflow threads have been joined
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:00,995 | INFO     | end of generic workflow (traces error code: 0)
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:00,995 | INFO     | traces error code: 0
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:00,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,060 [wrapper] ==== pilot stdout END ====
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,063 [wrapper] ==== wrapper stdout RESUME ====
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,067 [wrapper] pilotpid: 5910
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,070 [wrapper] Pilot exit status: 0
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,268 [wrapper] pandaids: 6665754175
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,305 [wrapper] cleanup supervisor_pilot 14003 5911
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,310 [wrapper] Test setup, not cleaning
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,314 [wrapper] apfmon messages muted
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,318 [wrapper] ==== wrapper stdout END ====
2025-05-30 02:54:02 (17800): Guest Log: 2025-05-30 08:54:01,322 [wrapper] ==== wrapper stderr END ====
2025-05-30 02:54:02 (17800): Guest Log:  *** Error codes and diagnostics ***
2025-05-30 02:54:02 (17800): Guest Log:     "exeErrorCode": 0,
2025-05-30 02:54:02 (17800): Guest Log:     "exeErrorDiag": "",
2025-05-30 02:54:02 (17800): Guest Log:     "pilotErrorCode": 0,
2025-05-30 02:54:02 (17800): Guest Log:     "pilotErrorDiag": "",
2025-05-30 02:54:02 (17800): Guest Log:  *** Listing of results directory ***
2025-05-30 02:54:02 (17800): Guest Log: total 200664
2025-05-30 02:54:02 (17800): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 26 03:39 pilot3.tar.gz
2025-05-30 02:54:02 (17800): Guest Log: -rwx------. 1 atlas atlas     37140 May 26 03:46 runpilot2-wrapper.sh
2025-05-30 02:54:02 (17800): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 26 03:46 queuedata.json
2025-05-30 02:54:02 (17800): Guest Log: -rwxr-xr-x. 1 atlas atlas     11897 May 30 05:04 init_data.xml
2025-05-30 02:54:02 (17800): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 May 30 05:04 input.tar.gz
2025-05-30 02:54:02 (17800): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 30 05:04 start_atlas.sh
2025-05-30 02:54:02 (17800): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 05:04 EVNT.44871834._001802.pool.root.1 -> /data/./ATLAS.root_0
2025-05-30 02:54:02 (17800): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 30 05:04 pandaJob.out
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas    992366 May 30 05:05 agis_schedconf.cvmfs.json
2025-05-30 02:54:02 (17800): Guest Log: drwx------. 4 atlas atlas      4096 May 30 05:05 pilot3
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas 198806050 May 30 08:52 HITS.44871837._045165.pool.root.1
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas      1029 May 30 08:53 memory_monitor_summary.json
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas   1603667 May 30 08:53 agis_ddmendpoints.agis.ALL.json
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas    314142 May 30 08:53 log.44871837._045165.job.log.tgz.1
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas        95 May 30 08:53 pilot_heartbeat.json
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas      7724 May 30 08:53 heartbeat.json
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas      4413 May 30 08:54 pilotlog.txt
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas   1135270 May 30 08:54 log.44871837._045165.job.log.1
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas       357 May 30 08:54 output.list
2025-05-30 02:54:02 (17800): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 30 08:54 runtime_log
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas   1464320 May 30 08:54 result.tar.gz
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas       661 May 30 08:54 Zt9NDmQydd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXqVKDmlLEVvm.diag
2025-05-30 02:54:02 (17800): Guest Log: -rw-r--r--. 1 atlas atlas      8605 May 30 08:54 runtime_log.err
2025-05-30 02:54:02 (17800): Guest Log: Looking for outputfile HITS.44871837._045165.pool.root.1
2025-05-30 02:54:02 (17800): Guest Log: HITS file was successfully produced
2025-05-30 02:54:02 (17800): Guest Log: -rw-------. 1 atlas atlas 198806050 May 30 08:52 /home/atlas/RunAtlas/HITS.44871837._045165.pool.root.1
2025-05-30 02:54:03 (17800): Guest Log: Successfully finished the ATLAS job!
2025-05-30 02:54:03 (17800): Guest Log: Copying the results back to the shared directory!
2025-05-30 02:54:03 (17800): Guest Log:  *** Contents of shared directory: ***
2025-05-30 02:54:03 (17800): Guest Log: total 416044
2025-05-30 02:54:03 (17800): Guest Log: -rwxrwxrwx. 1 root root 225213830 May 30 05:03 ATLAS.root_0
2025-05-30 02:54:03 (17800): Guest Log: -rwxrwxrwx. 1 root root 198806050 May 30 08:54 HITS.pool.root.1
2025-05-30 02:54:03 (17800): Guest Log: -rwxrwxrwx. 1 root root     11897 May 30 05:03 init_data.xml
2025-05-30 02:54:03 (17800): Guest Log: -rwxrwxrwx. 1 root root    508881 May 26 09:49 input.tar.gz
2025-05-30 02:54:03 (17800): Guest Log: -rwxrwxrwx. 1 root root   1464320 May 30 08:54 result.tar.gz
2025-05-30 02:54:03 (17800): Guest Log: -rwxrwxrwx. 1 root root     15093 May 26 09:49 start_atlas.sh
2025-05-30 02:54:03 (17800): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-30 02:54:03 (17800): VM Completion File Detected.
2025-05-30 02:54:03 (17800): Powering off VM.
2025-05-30 02:54:04 (17800): Successfully stopped VM.
2025-05-30 02:54:04 (17800): Deregistering VM. (boinc_844ebee55f849018, slot#1)
2025-05-30 02:54:04 (17800): Removing network bandwidth throttle group from VM.
2025-05-30 02:54:04 (17800): Removing VM from VirtualBox.
02:54:09 (17800): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN