Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:08:13 (4161413): wrapper (7.7.26015): starting
23:08:13 (4161413): wrapper: running run_atlas (--nthreads 6)
[2025-05-26 23:08:13] Arguments: --nthreads 6
[2025-05-26 23:08:13] Threads: 6
[2025-05-26 23:08:13] Checking for CVMFS
[2025-05-26 23:08:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 23:08:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 23:08:13] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 23:08:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 23:08:14] 2.11.5.0 1578993 3166 79660 146442 1 186 42824783 52428800 1348 130560 0 7132407 99.997 761578 81 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-26 23:08:14] CVMFS is ok
[2025-05-26 23:08:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 23:08:14] Checking for apptainer binary...
[2025-05-26 23:08:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 23:08:14] Running /usr/bin/apptainer --version
[2025-05-26 23:08:14] apptainer version 1.3.5-1.el9
[2025-05-26 23:08:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 23:08:14] testio008
[2025-05-26 23:08:14] apptainer works
[2025-05-26 23:08:14] Set ATHENA_PROC_NUMBER=6
[2025-05-26 23:08:14] Set ATHENA_CORE_NUMBER=6
[2025-05-26 23:08:14] Starting ATLAS job with PandaID=6665740720
[2025-05-26 23:08:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 00:39:54]  *** The last 200 lines of the pilot log: ***
[2025-05-27 00:39:54]  is_tar=False
[2025-05-27 00:39:54]  lfn=log.44871837._039658.job.log.tgz.1
[2025-05-27 00:39:54]  mtime=0
[2025-05-27 00:39:54]  protocol_id=None
[2025-05-27 00:39:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-27 00:39:54]  replicas=None
[2025-05-27 00:39:54]  scope=mc23_13p6TeV
[2025-05-27 00:39:54]  status=None
[2025-05-27 00:39:54]  status_code=0
[2025-05-27 00:39:54]  storage_token=
[2025-05-27 00:39:54]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6665740720/log.44871837._039658.job.log.tgz.1
[2025-05-27 00:39:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/50/log.44871837._039658.job.log.tgz.1
[2025-05-27 00:39:54]  workdir=None
[2025-05-27 00:39:54] ]
[2025-05-27 00:39:54] 2025-05-26 15:39:37,581 | INFO     | transferring file log.44871837._039658.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6665740720/log.44871837._039658.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-27 00:39:54] 2025-05-26 15:39:37,581 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6665740720/log.44871837._039658.job.log.tgz.1 /var/lib/boinc/slots/2/log.44871837._039658.job
[2025-05-27 00:39:54] 2025-05-26 15:39:37,587 | INFO     | adding to output.list: log.44871837._039658.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/50/log.44871837._039658.job.log.tg
[2025-05-27 00:39:54] 2025-05-26 15:39:37,587 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-27 00:39:54] 2025-05-26 15:39:37,587 | INFO     | summary of transferred files:
[2025-05-27 00:39:54] 2025-05-26 15:39:37,587 | INFO     |  -- lfn=log.44871837._039658.job.log.tgz.1, status_code=0, status=transferred
[2025-05-27 00:39:54] 2025-05-26 15:39:37,587 | INFO     | stage-out finished correctly
[2025-05-27 00:39:54] 2025-05-26 15:39:37,631 | WARNING  | process 4171749 can no longer be monitored (due to stat problems) - aborting
[2025-05-27 00:39:54] 2025-05-26 15:39:37,631 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6665740720/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 00:39:54] 2025-05-26 15:39:37,631 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6665740720/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 00:39:54] 2025-05-26 15:39:37,657 | INFO     | number of running child processes to parent process 4171749: 1
[2025-05-27 00:39:54] 2025-05-26 15:39:37,657 | INFO     | maximum number of monitored processes: 6
[2025-05-27 00:39:54] 2025-05-26 15:39:38,044 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-27 00:39:54] 2025-05-26 15:39:38,292 | INFO     | job 6665740720 has state=finished
[2025-05-27 00:39:54] 2025-05-26 15:39:38,293 | INFO     | preparing for final server update for job 6665740720 in state='finished'
[2025-05-27 00:39:54] 2025-05-26 15:39:39,224 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-27 00:39:54] 2025-05-26 15:39:39,224 | INFO     | this job has now completed (state=finished)
[2025-05-27 00:39:54] 2025-05-26 15:39:39,224 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-27 00:39:54] 2025-05-26 15:39:39,224 | INFO     | log transfer has been attempted: DONE
[2025-05-27 00:39:54] 2025-05-26 15:39:39,225 | INFO     | job 6665740720 has finished - writing final server update
[2025-05-27 00:39:54] 2025-05-26 15:39:39,225 | INFO     | total number of processed events: 400 (read)
[2025-05-27 00:39:54] 2025-05-26 15:39:39,226 | INFO     | executing command: lscpu
[2025-05-27 00:39:54] 2025-05-26 15:39:39,235 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-27 00:39:54] 2025-05-26 15:39:40,159 | INFO     | monitor loop #391: job 0:6665740720 is in state 'finished'
[2025-05-27 00:39:54] 2025-05-26 15:39:40,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 00:39:54] 2025-05-26 15:39:40,500 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-27 00:39:54] 2025-05-26 15:39:40,500 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6665740720/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 00:39:54] 2025-05-26 15:39:40,501 | INFO     | extracted standard info from prmon json
[2025-05-27 00:39:54] 2025-05-26 15:39:40,501 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 00:39:54] 2025-05-26 15:39:40,501 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 00:39:54] 2025-05-26 15:39:40,501 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 00:39:54] 2025-05-26 15:39:40,501 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 00:39:54] 2025-05-26 15:39:40,502 | INFO     | fitting pss+swap vs Time
[2025-05-27 00:39:54] 2025-05-26 15:39:40,502 | INFO     | sum of square deviations: 163098494.3797471
[2025-05-27 00:39:54] 2025-05-26 15:39:40,502 | INFO     | sum of deviations: 11536874631.67088
[2025-05-27 00:39:54] 2025-05-26 15:39:40,502 | INFO     | mean x: 1748271229.9113925
[2025-05-27 00:39:54] 2025-05-26 15:39:40,502 | INFO     | mean y: 2470915.810126582
[2025-05-27 00:39:54] 2025-05-26 15:39:40,502 | INFO     | -- intersect: -123662594652.99483
[2025-05-27 00:39:54] 2025-05-26 15:39:40,502 | INFO     | intersect: -123662594652.99483
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | chi2: 1.4904337836759523
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | -- intersect: -123662594652.99483
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | current memory leak: 70.74 B/s (using 79 data points, chi2=1.49)
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | ..............................
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . Timing measurements:
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . get job = 0 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . initial setup = 4 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . payload setup = 1 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . stage-in = 0 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . payload execution = 5458 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . stage-out = 0 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | . log creation = 0 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,503 | INFO     | ..............................
[2025-05-27 00:39:54] 2025-05-26 15:39:40,541 | INFO     | 
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | job summary report
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | --------------------------------------------------
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | PanDA job id: 6665740720
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | task id: 44871837
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | errors: (none)
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | pilot state: finished 
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | transexitcode: 0
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | exeerrorcode: 0
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | exeerrordiag: 
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | exitcode: 0
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | exitmsg: OK
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | cpuconsumptiontime: 26702 s
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | nevents: 400
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | neventsw: 0
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | pid: 4171749
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | pgrp: 4171749
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | corecount: 6
[2025-05-27 00:39:54] 2025-05-26 15:39:40,542 | INFO     | event service: False
[2025-05-27 00:39:54] 2025-05-26 15:39:40,543 | INFO     | sizes: {0: 2405234, 1: 2405440, 11: 2405468, 5464: 2440824, 5465: 2440824, 5467: 2440994}
[2025-05-27 00:39:54] 2025-05-26 15:39:40,543 | INFO     | --------------------------------------------------
[2025-05-27 00:39:54] 2025-05-26 15:39:40,543 | INFO     | 
[2025-05-27 00:39:54] 2025-05-26 15:39:40,543 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 00:39:54] 2025-05-26 15:39:40,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 00:39:54] 2025-05-26 15:39:40,554 | INFO     | job 6665740720 has completed (purged errors)
[2025-05-27 00:39:54] 2025-05-26 15:39:40,554 | INFO     | overall cleanup function is called
[2025-05-27 00:39:54] 2025-05-26 15:39:41,557 | INFO     | --- collectZombieJob: --- 10, [4171749]
[2025-05-27 00:39:54] 2025-05-26 15:39:41,557 | INFO     | zombie collector waiting for pid 4171749
[2025-05-27 00:39:54] 2025-05-26 15:39:41,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 00:39:54] 2025-05-26 15:39:41,557 | INFO     | collected zombie processes
[2025-05-27 00:39:54] 2025-05-26 15:39:41,557 | INFO     | will attempt to kill all subprocesses of pid=4171749
[2025-05-27 00:39:54] 2025-05-26 15:39:41,606 | INFO     | process IDs to be killed: [4171749] (in reverse order)
[2025-05-27 00:39:54] 2025-05-26 15:39:41,623 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 00:39:54] 2025-05-26 15:39:41,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 00:39:54] 2025-05-26 15:39:41,626 | INFO     | did not find any defunct processes belonging to 4171749
[2025-05-27 00:39:54] 2025-05-26 15:39:41,627 | INFO     | did not find any defunct processes belonging to 4171749
[2025-05-27 00:39:54] 2025-05-26 15:39:41,628 | INFO     | ready for new job
[2025-05-27 00:39:54] 2025-05-26 15:39:41,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 00:39:54] 2025-05-26 15:39:41,628 | INFO     | **************************************
[2025-05-27 00:39:54] 2025-05-26 15:39:41,628 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 00:39:54] 2025-05-26 15:39:41,629 | INFO     | **************************************
[2025-05-27 00:39:54] 2025-05-26 15:39:41,629 | INFO     | 
[2025-05-27 00:39:54] 2025-05-26 15:39:41,629 | INFO     | architecture information:
[2025-05-27 00:39:54] 2025-05-26 15:39:41,629 | INFO     | executing command: cat /etc/os-release
[2025-05-27 00:39:54] 2025-05-26 15:39:41,634 | INFO     | cat /etc/os-release:
[2025-05-27 00:39:54] NAME="CentOS Linux"
[2025-05-27 00:39:54] VERSION="7 (Core)"
[2025-05-27 00:39:54] ID="centos"
[2025-05-27 00:39:54] ID_LIKE="rhel fedora"
[2025-05-27 00:39:54] VERSION_ID="7"
[2025-05-27 00:39:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 00:39:54] ANSI_COLOR="0;31"
[2025-05-27 00:39:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 00:39:54] HOME_URL="https://www.centos.org/"
[2025-05-27 00:39:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 00:39:54] 
[2025-05-27 00:39:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 00:39:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 00:39:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 00:39:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 00:39:54] 
[2025-05-27 00:39:54] 2025-05-26 15:39:41,634 | INFO     | **************************************
[2025-05-27 00:39:54] 2025-05-26 15:39:42,137 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | INFO     | sufficient remaining disk space (282475888640 B)
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | INFO     | update_server=False
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 00:39:54] 2025-05-26 15:39:42,144 | INFO     | aborting loop
[2025-05-27 00:39:54] 2025-05-26 15:39:42,145 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 00:39:54] 2025-05-26 15:39:42,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 00:39:54] 2025-05-26 15:39:42,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 00:39:54] 2025-05-26 15:39:42,175 | INFO     | all job control threads have been joined
[2025-05-27 00:39:54] 2025-05-26 15:39:42,191 | INFO     | all payload control threads have been joined
[2025-05-27 00:39:54] 2025-05-26 15:39:42,246 | INFO     | job.realtimelogging is not enabled
[2025-05-27 00:39:54] 2025-05-26 15:39:42,884 | INFO     | all data control threads have been joined
[2025-05-27 00:39:54] 2025-05-26 15:39:43,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 00:39:54] 2025-05-26 15:39:43,148 | INFO     | [job] retrieve thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,149 | INFO     | [job] queue monitor thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,150 | INFO     | [job] job monitor thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,180 | INFO     | [job] control thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,197 | INFO     | [payload] control thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,200 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,252 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,370 | INFO     | [payload] failed_post thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:43,889 | INFO     | [data] control thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:44,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 00:39:54] 2025-05-26 15:39:44,252 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:44,288 | INFO     | [job] validate thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:44,344 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:44,344 | INFO     | [data] copytool_in thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:44,687 | INFO     | [payload] validate_post thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:45,124 | INFO     | [data] copytool_out thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:48,089 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 00:39:54] 2025-05-26 15:39:49,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303703193408)>', '<ExcThread(monitor, started 140303218501376)>']
[2025-05-27 00:39:54] 2025-05-26 15:39:49,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 00:39:54] 2025-05-26 15:39:49,174 | INFO     | [monitor] control thread has ended
[2025-05-27 00:39:54] 2025-05-26 15:39:54,108 | INFO     | all workflow threads have been joined
[2025-05-27 00:39:54] 2025-05-26 15:39:54,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 00:39:54] 2025-05-26 15:39:54,109 | INFO     | traces error code: 0
[2025-05-27 00:39:54] 2025-05-26 15:39:54,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 00:39:54] 2025-05-26 15:39:54,160 [wrapper] ==== pilot stdout END ====
[2025-05-27 00:39:54] 2025-05-26 15:39:54,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 00:39:54] 2025-05-26 15:39:54,162 [wrapper] pilotpid: 4165151
[2025-05-27 00:39:54] 2025-05-26 15:39:54,163 [wrapper] Pilot exit status: 0
[2025-05-27 00:39:54] 2025-05-26 15:39:54,167 [wrapper] pandaids: 6665740720
[2025-05-27 00:39:54] 2025-05-26 15:39:54,181 [wrapper] cleanup supervisor_pilot   18085 4165152
[2025-05-27 00:39:54] 2025-05-26 15:39:54,182 [wrapper] Test setup, not cleaning
[2025-05-27 00:39:54] 2025-05-26 15:39:54,183 [wrapper] apfmon messages muted
[2025-05-27 00:39:54] 2025-05-26 15:39:54,184 [wrapper] ==== wrapper stdout END ====
[2025-05-27 00:39:54] 2025-05-26 15:39:54,186 [wrapper] ==== wrapper stderr END ====
[2025-05-27 00:39:54]  *** Error codes and diagnostics ***
[2025-05-27 00:39:54]     "exeErrorCode": 0,
[2025-05-27 00:39:54]     "exeErrorDiag": "",
[2025-05-27 00:39:54]     "pilotErrorCode": 0,
[2025-05-27 00:39:54]     "pilotErrorDiag": "",
[2025-05-27 00:39:54]  *** Listing of results directory ***
[2025-05-27 00:39:54] total 424028
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc    495897 May 26 04:18 pilot3.tar.gz
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc      5111 May 26 04:32 queuedata.json
[2025-05-27 00:39:54] -rwx------. 1 boinc boinc     37140 May 26 04:32 runpilot2-wrapper.sh
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc       100 May 26 23:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 00:39:54] -rwxr-xr-x. 1 boinc boinc      7986 May 26 23:08 run_atlas
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc       105 May 26 23:08 job.xml
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc      9509 May 26 23:08 init_data.xml
[2025-05-27 00:39:54] -rw-r--r--. 2 boinc boinc 224303139 May 26 23:08 EVNT.44871834._001582.pool.root.1
[2025-05-27 00:39:54] -rw-r--r--. 2 boinc boinc     15093 May 26 23:08 start_atlas.sh
[2025-05-27 00:39:54] drwxrwx--x. 2 boinc boinc        68 May 26 23:08 shared
[2025-05-27 00:39:54] -rw-r--r--. 2 boinc boinc    508880 May 26 23:08 input.tar.gz
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc         0 May 26 23:08 boinc_lockfile
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc      2559 May 26 23:08 pandaJob.out
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc    990445 May 26 23:08 agis_schedconf.cvmfs.json
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc   1603667 May 26 23:08 agis_ddmendpoints.agis.ALL.json
[2025-05-27 00:39:54] drwx------. 4 boinc boinc      4096 May 26 23:08 pilot3
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc 204490066 May 27 00:39 HITS.44871837._039658.pool.root.1
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc        96 May 27 00:39 pilot_heartbeat.json
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc      1020 May 27 00:39 memory_monitor_summary.json
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc    277331 May 27 00:39 log.44871837._039658.job.log.tgz.1
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc      8192 May 27 00:39 boinc_mmap_file
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc        27 May 27 00:39 wrapper_checkpoint.txt
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc      7666 May 27 00:39 heartbeat.json
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc       530 May 27 00:39 boinc_task_state.xml
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc      4549 May 27 00:39 pilotlog.txt
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc    515225 May 27 00:39 log.44871837._039658.job.log.1
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc       357 May 27 00:39 output.list
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc       620 May 27 00:39 runtime_log
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc    808960 May 27 00:39 result.tar.gz
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc      8617 May 27 00:39 runtime_log.err
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc       641 May 27 00:39 rnOKDmnGWd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkyUKDmQpGuSn.diag
[2025-05-27 00:39:54] -rw-r--r--. 1 boinc boinc     21217 May 27 00:39 stderr.txt
[2025-05-27 00:39:54] HITS file was successfully produced:
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc 204490066 May 27 00:39 shared/HITS.pool.root.1
[2025-05-27 00:39:54]  *** Contents of shared directory: ***
[2025-05-27 00:39:54] total 420056
[2025-05-27 00:39:54] -rw-r--r--. 2 boinc boinc 224303139 May 26 23:08 ATLAS.root_0
[2025-05-27 00:39:54] -rw-r--r--. 2 boinc boinc     15093 May 26 23:08 start_atlas.sh
[2025-05-27 00:39:54] -rw-r--r--. 2 boinc boinc    508880 May 26 23:08 input.tar.gz
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc 204490066 May 27 00:39 HITS.pool.root.1
[2025-05-27 00:39:54] -rw-------. 1 boinc boinc    808960 May 27 00:39 result.tar.gz
00:39:55 (4161413): run_atlas exited; CPU time 26734.172535
00:39:55 (4161413): called boinc_finish(0)

</stderr_txt>
]]>

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