Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 08:34:46 (16444): Detected: vboxwrapper 26206
2025-05-26 08:34:46 (16444): Detected: BOINC client v8.0.2
2025-05-26 08:34:46 (16444): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-26 08:34:47 (16444): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 08:34:47 (16444): Create VM. (boinc_c408d7f24a537cad, slot#0)
2025-05-26 08:34:48 (16444): Setting Memory Size for VM. (4400MB)
2025-05-26 08:34:48 (16444): Setting CPU Count for VM. (4)
2025-05-26 08:34:48 (16444): Setting Chipset Options for VM.
2025-05-26 08:34:49 (16444): Setting Graphics Controller Options for VM.
2025-05-26 08:34:49 (16444): Setting Boot Options for VM.
2025-05-26 08:34:49 (16444): Setting Network Configuration for NAT.
2025-05-26 08:34:49 (16444): Enabling VM Network Access.
2025-05-26 08:34:50 (16444): Disabling USB Support for VM.
2025-05-26 08:34:50 (16444): Disabling COM Port Support for VM.
2025-05-26 08:34:50 (16444): Disabling LPT Port Support for VM.
2025-05-26 08:34:50 (16444): Disabling Audio Support for VM.
2025-05-26 08:34:51 (16444): Disabling Clipboard Support for VM.
2025-05-26 08:34:51 (16444): Disabling Drag and Drop Support for VM.
2025-05-26 08:34:51 (16444): Adding storage controller(s) to VM.
2025-05-26 08:34:51 (16444): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 08:34:54 (16444): Adding VirtualBox Guest Additions to VM.
2025-05-26 08:34:55 (16444): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 08:34:55 (16444): forwarding host port 58850 to guest port 80
2025-05-26 08:34:55 (16444): Enabling remote desktop for VM.
2025-05-26 08:34:55 (16444): Required extension pack not installed, remote desktop not enabled.
2025-05-26 08:34:55 (16444): Enabling shared directory for VM.
2025-05-26 08:34:56 (16444): Starting VM using VBoxManage interface. (boinc_c408d7f24a537cad, slot#0)
2025-05-26 08:35:03 (16444): Successfully started VM. (PID = '10120')
2025-05-26 08:35:03 (16444): Reporting VM Process ID to BOINC.
2025-05-26 08:35:03 (16444): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-26 08:35:03 (16444): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 08:35:03 (16444): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-26 08:35:03 (16444): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 08:35:03 (16444): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 08:35:03 (16444): Detected: Web Application Enabled (http://localhost:58850)
2025-05-26 08:35:03 (16444): Preference change detected
2025-05-26 08:35:03 (16444): Setting CPU throttle for VM. (100%)
2025-05-26 08:35:03 (16444): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 08:35:05 (16444): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 08:35:05 (16444): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 08:35:08 (16444): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 08:35:08 (16444): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 08:35:08 (16444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 08:35:16 (16444): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 08:35:16 (16444): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 08:35:22 (16444): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.000224 main     Log opened 2025-05-26T08:35:20.959829000Z
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.000354 main     OS Product: Linux
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.000393 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.000426 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.000460 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.000461 main     Process ID: 1269
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.000462 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 08:35:22 (16444): Guest Log: 00:00:00.001435 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 08:35:23 (16444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 08:35:23 (16444): Guest Log: [INFO] Mounting shared directory
2025-05-26 08:35:23 (16444): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 08:35:25 (16444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 08:35:25 (16444): Guest Log: [INFO] Detected branch: prod
2025-05-26 08:35:25 (16444): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 08:35:25 (16444): Guest Log: Copying input files
2025-05-26 08:35:27 (16444): Guest Log: Copied input files into RunAtlas.
2025-05-26 08:35:27 (16444): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 08:35:27 (16444): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 08:35:27 (16444): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 08:35:27 (16444): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 08:35:32 (16444): Guest Log: 00:00:10.006168 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 489 390 000ns (GuestNow=1 748 241 332 474 154 000 ns GuestLast=1 748 248 520 963 544 000 ns fSetTimeLastLoop=true )
2025-05-26 08:35:35 (16444): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 08:35:35 (16444): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 08:35:35 (16444): Guest Log: 2.6.3.0 1543 0 30100 146428 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 08:35:36 (16444): Guest Log: copied the webapp to /var/www
2025-05-26 08:35:36 (16444): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-26 08:35:36 (16444): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-26 08:35:36 (16444): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 08:35:36 (16444): Guest Log:  *** Starting ATLAS job. (PandaID=6665748717 taskID=44871837) ***
2025-05-26 08:42:15 (16444): Guest Log:  *** Job finished ***
2025-05-26 08:42:15 (16444): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:05,204 | INFO     | [data] copytool_out thread has finished
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:05,710 | INFO     | [job] queue monitor thread has finished
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:09,026 | INFO     | [data] queue_monitor thread has finished
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:09,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471956105024)>', '<ExcThread(monitor, started 140471351351040)>']
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:09,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:09,716 | INFO     | [monitor] control thread has ended
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,269 | INFO     | all workflow threads have been joined
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,270 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,270 | INFO     | traces error code: 0
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,425 [wrapper] ==== pilot stdout END ====
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,434 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,442 [wrapper] pilotpid: 5852
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,450 [wrapper] Pilot exit status: 0
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,529 [wrapper] pandaids: 6665748717
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,578 [wrapper] cleanup supervisor_pilot  5859 5853
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,585 [wrapper] Test setup, not cleaning
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,594 [wrapper] apfmon messages muted
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,602 [wrapper] ==== wrapper stdout END ====
2025-05-26 08:42:15 (16444): Guest Log: 2025-05-26 06:42:14,609 [wrapper] ==== wrapper stderr END ====
2025-05-26 08:42:15 (16444): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 08:42:15 (16444): Guest Log:     "exeErrorCode": 65,
2025-05-26 08:42:15 (16444): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-05-26 08:42:15 (16444): Guest Log:     "pilotErrorCode": 1305,
2025-05-26 08:42:15 (16444): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-05-26 08:42:15 (16444): Guest Log:  *** Listing of results directory ***
2025-05-26 08:42:15 (16444): Guest Log: total 3968
2025-05-26 08:42:15 (16444): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 25 23:34 pilot3.tar.gz
2025-05-26 08:42:15 (16444): Guest Log: -rwx------. 1 atlas atlas   37140 May 25 23:40 runpilot2-wrapper.sh
2025-05-26 08:42:15 (16444): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 25 23:40 queuedata.json
2025-05-26 08:42:15 (16444): Guest Log: -rwxr-xr-x. 1 atlas atlas    9084 May 26 06:35 init_data.xml
2025-05-26 08:42:15 (16444): Guest Log: -rwxr-xr-x. 1 atlas atlas  508875 May 26 06:35 input.tar.gz
2025-05-26 08:42:15 (16444): Guest Log: -rwxr-xr-x. 1 atlas atlas   15093 May 26 06:35 start_atlas.sh
2025-05-26 08:42:15 (16444): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 26 06:35 EVNT.44871834._001704.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 08:42:15 (16444): Guest Log: -rw-r--r--. 1 atlas atlas    2559 May 26 06:35 pandaJob.out
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas  990811 May 26 06:36 agis_schedconf.cvmfs.json
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas 1596740 May 26 06:36 agis_ddmendpoints.agis.ALL.json
2025-05-26 08:42:15 (16444): Guest Log: drwx------. 4 atlas atlas    4096 May 26 06:36 pilot3
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas   45049 May 26 06:39 log.44871837._042711.job.log.tgz.1
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas      95 May 26 06:41 pilot_heartbeat.json
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas    8002 May 26 06:41 heartbeat.json
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas    4536 May 26 06:42 pilotlog.txt
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas  108673 May 26 06:42 log.44871837._042711.job.log.1
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas     188 May 26 06:42 output.list
2025-05-26 08:42:15 (16444): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 26 06:42 runtime_log
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas  174080 May 26 06:42 result.tar.gz
2025-05-26 08:42:15 (16444): Guest Log: -rw-r--r--. 1 atlas atlas    8451 May 26 06:42 runtime_log.err
2025-05-26 08:42:15 (16444): Guest Log: -rw-------. 1 atlas atlas     645 May 26 06:42 BL6KDm17Zd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlLPKDm9Dnkpn.diag
2025-05-26 08:42:15 (16444): Guest Log: Looking for outputfile HITS.44871837._042711.pool.root.1
2025-05-26 08:42:15 (16444): Guest Log: No HITS file was produced
2025-05-26 08:42:15 (16444): Guest Log: Successfully finished the ATLAS job!
2025-05-26 08:42:15 (16444): Guest Log: Copying the results back to the shared directory!
2025-05-26 08:42:15 (16444): Guest Log:  *** Contents of shared directory: ***
2025-05-26 08:42:15 (16444): Guest Log: total 219620
2025-05-26 08:42:15 (16444): Guest Log: -rwxrwxrwx. 1 root root 224171018 May 26 06:34 ATLAS.root_0
2025-05-26 08:42:15 (16444): Guest Log: -rwxrwxrwx. 1 root root      9084 May 26 06:34 init_data.xml
2025-05-26 08:42:15 (16444): Guest Log: -rwxrwxrwx. 1 root root    508875 May 26 06:27 input.tar.gz
2025-05-26 08:42:15 (16444): Guest Log: -rwxrwxrwx. 1 root root    174080 May 26  2025 result.tar.gz
2025-05-26 08:42:15 (16444): Guest Log: -rwxrwxrwx. 1 root root     15093 May 26 06:27 start_atlas.sh
2025-05-26 08:42:15 (16444): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 08:42:15 (16444): VM Completion File Detected.
2025-05-26 08:42:15 (16444): Powering off VM.
2025-05-26 08:42:17 (16444): Successfully stopped VM.
2025-05-26 08:42:17 (16444): Deregistering VM. (boinc_c408d7f24a537cad, slot#0)
2025-05-26 08:42:17 (16444): Removing network bandwidth throttle group from VM.
2025-05-26 08:42:17 (16444): Removing VM from VirtualBox.
08:42:22 (16444): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN