Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 12:20:13 (9772): Detected: vboxwrapper 26206
2025-05-26 12:20:13 (9772): Detected: BOINC client v8.0.2
2025-05-26 12:20:13 (9772): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-26 12:20:13 (9772): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 12:20:14 (9772): Create VM. (boinc_eb0273eedb50a9ec, slot#8)
2025-05-26 12:20:14 (9772): Setting Memory Size for VM. (4800MB)
2025-05-26 12:20:15 (9772): Setting CPU Count for VM. (8)
2025-05-26 12:20:15 (9772): Setting Chipset Options for VM.
2025-05-26 12:20:15 (9772): Setting Graphics Controller Options for VM.
2025-05-26 12:20:15 (9772): Setting Boot Options for VM.
2025-05-26 12:20:16 (9772): Setting Network Configuration for NAT.
2025-05-26 12:20:16 (9772): Enabling VM Network Access.
2025-05-26 12:20:16 (9772): Disabling USB Support for VM.
2025-05-26 12:20:17 (9772): Disabling COM Port Support for VM.
2025-05-26 12:20:17 (9772): Disabling LPT Port Support for VM.
2025-05-26 12:20:17 (9772): Disabling Audio Support for VM.
2025-05-26 12:20:17 (9772): Disabling Clipboard Support for VM.
2025-05-26 12:20:18 (9772): Disabling Drag and Drop Support for VM.
2025-05-26 12:20:18 (9772): Adding storage controller(s) to VM.
2025-05-26 12:20:18 (9772): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 12:20:21 (9772): Adding VirtualBox Guest Additions to VM.
2025-05-26 12:20:21 (9772): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 12:20:21 (9772): forwarding host port 56727 to guest port 80
2025-05-26 12:20:22 (9772): Enabling remote desktop for VM.
2025-05-26 12:20:22 (9772): Enabling shared directory for VM.
2025-05-26 12:20:23 (9772): Starting VM using VBoxManage interface. (boinc_eb0273eedb50a9ec, slot#8)
2025-05-26 12:20:28 (9772): Successfully started VM. (PID = '2408')
2025-05-26 12:20:28 (9772): Reporting VM Process ID to BOINC.
2025-05-26 12:20:28 (9772): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-26 12:20:28 (9772): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 12:20:28 (9772): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-26 12:20:28 (9772): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 12:20:28 (9772): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 12:20:28 (9772): Detected: Web Application Enabled (http://localhost:56727)
2025-05-26 12:20:28 (9772): Detected: Remote Desktop Enabled (localhost:56728)
2025-05-26 12:20:28 (9772): Preference change detected
2025-05-26 12:20:28 (9772): Setting CPU throttle for VM. (100%)
2025-05-26 12:20:28 (9772): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 12:20:30 (9772): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 12:20:30 (9772): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 12:20:33 (9772): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 12:20:33 (9772): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 12:20:33 (9772): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 12:20:38 (9772): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 12:20:38 (9772): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 12:20:43 (9772): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.000138 main     Log opened 2025-05-26T12:20:42.035714000Z
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.000213 main     OS Product: Linux
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.000241 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.000265 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.000289 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.000289 main     Process ID: 1376
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.000290 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 12:20:43 (9772): Guest Log: 00:00:00.002048 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 12:20:43 (9772): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 12:20:43 (9772): Guest Log: [INFO] Mounting shared directory
2025-05-26 12:20:43 (9772): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 12:20:53 (9772): Guest Log: 00:00:10.014349 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 895 594 000ns (GuestNow=1 748 254 853 143 641 000 ns GuestLast=1 748 262 042 039 235 000 ns fSetTimeLastLoop=true )
2025-05-26 12:23:03 (9772): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 12:23:03 (9772): Guest Log: [INFO] Detected branch: prod
2025-05-26 12:23:03 (9772): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 12:23:03 (9772): Guest Log: Copying input files
2025-05-26 12:23:04 (9772): Guest Log: Copied input files into RunAtlas.
2025-05-26 12:23:04 (9772): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 12:23:04 (9772): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 12:23:04 (9772): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 12:23:04 (9772): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 12:26:20 (9772): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 12:26:20 (9772): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 12:26:20 (9772): Guest Log: 2.6.3.0 1707 4 32304 146433 4 1 3117617 4096000 0 65024 0 0 n/a 1 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 12:26:21 (9772): Guest Log: copied the webapp to /var/www
2025-05-26 12:26:21 (9772): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-26 12:26:21 (9772): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-26 12:26:21 (9772): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 12:26:21 (9772): Guest Log:  *** Starting ATLAS job. (PandaID=6665743645 taskID=44871837) ***
2025-05-26 12:37:29 (9772): Guest Log:  *** Job finished ***
2025-05-26 12:37:29 (9772): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:36:55,559 | INFO     | [job] control thread has finished
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:36:56,269 | INFO     | [data] copytool_out thread has finished
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:36:57,621 | INFO     | [data] queue_monitor thread has finished
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:36:57,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140112516732736)>', '<ExcThread(monitor, started 140111488476928)>']
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:36:57,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:36:57,834 | INFO     | [monitor] control thread has ended
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,692 | INFO     | all workflow threads have been joined
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,692 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,693 | INFO     | traces error code: 0
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,765 [wrapper] ==== pilot stdout END ====
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,769 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,773 [wrapper] pilotpid: 6145
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:02,778 [wrapper] Pilot exit status: 0
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:28,655 [wrapper] pandaids: 6665743645
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:28,706 [wrapper] cleanup supervisor_pilot  6151 6146
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:28,718 [wrapper] Test setup, not cleaning
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:28,725 [wrapper] apfmon messages muted
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:28,731 [wrapper] ==== wrapper stdout END ====
2025-05-26 12:37:29 (9772): Guest Log: 2025-05-26 10:37:28,737 [wrapper] ==== wrapper stderr END ====
2025-05-26 12:37:29 (9772): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 12:37:29 (9772): Guest Log:     "exeErrorCode": 65,
2025-05-26 12:37:29 (9772): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-05-26 12:37:29 (9772): Guest Log:     "pilotErrorCode": 1305,
2025-05-26 12:37:29 (9772): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-05-26 12:37:29 (9772): Guest Log:  *** Listing of results directory ***
2025-05-26 12:37:29 (9772): Guest Log: total 3884
2025-05-26 12:37:29 (9772): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 25 20:46 pilot3.tar.gz
2025-05-26 12:37:29 (9772): Guest Log: -rwx------. 1 atlas atlas   37140 May 25 20:48 runpilot2-wrapper.sh
2025-05-26 12:37:29 (9772): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 25 20:48 queuedata.json
2025-05-26 12:37:29 (9772): Guest Log: -rwxr-xr-x. 1 atlas atlas    9128 May 26 10:23 init_data.xml
2025-05-26 12:37:29 (9772): Guest Log: -rwxr-xr-x. 1 atlas atlas  508881 May 26 10:23 input.tar.gz
2025-05-26 12:37:29 (9772): Guest Log: -rwxr-xr-x. 1 atlas atlas   15093 May 26 10:23 start_atlas.sh
2025-05-26 12:37:29 (9772): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 26 10:23 EVNT.44871834._001614.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 12:37:29 (9772): Guest Log: -rw-r--r--. 1 atlas atlas    2558 May 26 10:26 pandaJob.out
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas  989949 May 26 10:31 agis_schedconf.cvmfs.json
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas 1596740 May 26 10:31 agis_ddmendpoints.agis.ALL.json
2025-05-26 12:37:29 (9772): Guest Log: drwx------. 4 atlas atlas    4096 May 26 10:31 pilot3
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas    1009 May 26 10:34 memory_monitor_summary.json
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas   21291 May 26 10:34 log.44871837._040475.job.log.tgz.1
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas      95 May 26 10:36 pilot_heartbeat.json
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas    8366 May 26 10:36 heartbeat.json
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas    4599 May 26 10:37 pilotlog.txt
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas   86166 May 26 10:37 log.44871837._040475.job.log.1
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas     188 May 26 10:37 output.list
2025-05-26 12:37:29 (9772): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 26 10:37 runtime_log
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas  122880 May 26 10:37 result.tar.gz
2025-05-26 12:37:29 (9772): Guest Log: -rw-------. 1 atlas atlas     655 May 26 10:37 XffNDmqRXd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD9UKDmUB2Y3n.diag
2025-05-26 12:37:29 (9772): Guest Log: -rw-r--r--. 1 atlas atlas    8474 May 26 10:37 runtime_log.err
2025-05-26 12:37:30 (9772): Guest Log: Looking for outputfile HITS.44871837._040475.pool.root.1
2025-05-26 12:37:30 (9772): Guest Log: No HITS file was produced
2025-05-26 12:37:30 (9772): Guest Log: Successfully finished the ATLAS job!
2025-05-26 12:37:30 (9772): Guest Log: Copying the results back to the shared directory!
2025-05-26 12:37:30 (9772): Guest Log:  *** Contents of shared directory: ***
2025-05-26 12:37:30 (9772): Guest Log: total 218348
2025-05-26 12:37:30 (9772): Guest Log: -rwxrwxrwx. 1 root root 222922177 May 26 10:20 ATLAS.root_0
2025-05-26 12:37:30 (9772): Guest Log: -rwxrwxrwx. 1 root root      9128 May 26 10:20 init_data.xml
2025-05-26 12:37:30 (9772): Guest Log: -rwxrwxrwx. 1 root root    508881 May 26 06:15 input.tar.gz
2025-05-26 12:37:30 (9772): Guest Log: -rwxrwxrwx. 1 root root    122880 May 26 10:37 result.tar.gz
2025-05-26 12:37:30 (9772): Guest Log: -rwxrwxrwx. 1 root root     15093 May 26 06:15 start_atlas.sh
2025-05-26 12:37:30 (9772): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 12:37:30 (9772): VM Completion File Detected.
2025-05-26 12:37:30 (9772): Powering off VM.
2025-05-26 12:37:30 (9772): Successfully stopped VM.
2025-05-26 12:37:30 (9772): Deregistering VM. (boinc_eb0273eedb50a9ec, slot#8)
2025-05-26 12:37:30 (9772): Removing network bandwidth throttle group from VM.
2025-05-26 12:37:31 (9772): Removing VM from VirtualBox.
12:37:36 (9772): called boinc_finish(0)

</stderr_txt>
]]>

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