Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:31:59 (387336): wrapper (7.7.26015): starting
07:31:59 (387336): wrapper: running run_atlas (--nthreads 4)
[2025-05-27 07:31:59] Arguments: --nthreads 4
[2025-05-27 07:31:59] Threads: 4
[2025-05-27 07:31:59] Checking for CVMFS
[2025-05-27 07:31:59] No cvmfs_config command found, will try listing directly
[2025-05-27 07:31:59] CVMFS is ok
[2025-05-27 07:31:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 07:31:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 07:31:59] Further information can be found at the LHC@home message board.
[2025-05-27 07:31:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 07:31:59] Checking for apptainer binary...
[2025-05-27 07:31:59] which: no apptainer in ((null))
[2025-05-27 07:31:59] apptainer is not installed, using version from CVMFS
[2025-05-27 07:31:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 07:32:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-05-27 07:32:00] apptainer works
[2025-05-27 07:32:00] Set ATHENA_PROC_NUMBER=4
[2025-05-27 07:32:00] Set ATHENA_CORE_NUMBER=4
[2025-05-27 07:32:00] Starting ATLAS job with PandaID=6665747674
[2025-05-27 07:32:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 11:40:13]  *** The last 200 lines of the pilot log: ***
[2025-05-27 11:40:13] 2025-05-27 09:40:01,998 | INFO     | using path: /scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6665747674/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 11:40:13] 2025-05-27 09:40:01,999 | INFO     | extracted standard info from prmon json
[2025-05-27 11:40:13] 2025-05-27 09:40:01,999 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 11:40:13] 2025-05-27 09:40:01,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 11:40:13] 2025-05-27 09:40:02,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 11:40:13] 2025-05-27 09:40:02,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 11:40:13] 2025-05-27 09:40:02,005 | INFO     | fitting pss+swap vs Time
[2025-05-27 11:40:13] 2025-05-27 09:40:02,005 | INFO     | sum of square deviations: 4504437945.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,007 | INFO     | sum of deviations: -15530463207.499992
[2025-05-27 11:40:13] 2025-05-27 09:40:02,007 | INFO     | mean x: 1748331376.5
[2025-05-27 11:40:13] 2025-05-27 09:40:02,007 | INFO     | mean y: 2329776.1926229508
[2025-05-27 11:40:13] 2025-05-27 09:40:02,007 | INFO     | -- intersect: 6030250784.049035
[2025-05-27 11:40:13] 2025-05-27 09:40:02,007 | INFO     | intersect: 6030250784.049035
[2025-05-27 11:40:13] 2025-05-27 09:40:02,008 | INFO     | chi2: 2.411177300466883
[2025-05-27 11:40:13] 2025-05-27 09:40:02,008 | INFO     | sum of square deviations: 4233158440.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,010 | INFO     | sum of deviations: -45668381.99999969
[2025-05-27 11:40:13] 2025-05-27 09:40:02,010 | INFO     | mean x: 1748331224.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,010 | INFO     | mean y: 2338338.1046025106
[2025-05-27 11:40:13] 2025-05-27 09:40:02,011 | INFO     | -- intersect: 21199776.751854993
[2025-05-27 11:40:13] 2025-05-27 09:40:02,011 | INFO     | intersect: 21199776.751854993
[2025-05-27 11:40:13] 2025-05-27 09:40:02,011 | INFO     | chi2: 1.6182148982520428
[2025-05-27 11:40:13] 2025-05-27 09:40:02,011 | INFO     | current chi2=1.6182148982520428 (change=32.88693876063351 %)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,012 | INFO     | sum of square deviations: 3972995422.5
[2025-05-27 11:40:13] 2025-05-27 09:40:02,013 | INFO     | sum of deviations: -130354560.00000289
[2025-05-27 11:40:13] 2025-05-27 09:40:02,013 | INFO     | mean x: 1748331071.5
[2025-05-27 11:40:13] 2025-05-27 09:40:02,013 | INFO     | mean y: 2338288.452991453
[2025-05-27 11:40:13] 2025-05-27 09:40:02,014 | INFO     | -- intersect: 59701286.22264622
[2025-05-27 11:40:13] 2025-05-27 09:40:02,014 | INFO     | intersect: 59701286.22264622
[2025-05-27 11:40:13] 2025-05-27 09:40:02,014 | INFO     | chi2: 1.6180682094467604
[2025-05-27 11:40:13] 2025-05-27 09:40:02,014 | INFO     | current chi2=1.6180682094467604 (change=0.00906485321824663 %)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,014 | INFO     | right removable region: 233
[2025-05-27 11:40:13] 2025-05-27 09:40:02,015 | INFO     | sum of square deviations: 4233158440.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,017 | INFO     | sum of deviations: -49967758075.00004
[2025-05-27 11:40:13] 2025-05-27 09:40:02,017 | INFO     | mean x: 1748331529.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,017 | INFO     | mean y: 2348945.912133891
[2025-05-27 11:40:13] 2025-05-27 09:40:02,017 | INFO     | -- intersect: 20639470876.072372
[2025-05-27 11:40:13] 2025-05-27 09:40:02,017 | INFO     | intersect: 20639470876.072372
[2025-05-27 11:40:13] 2025-05-27 09:40:02,018 | INFO     | chi2: 0.9536304532322537
[2025-05-27 11:40:13] 2025-05-27 09:40:02,018 | INFO     | current chi2=0.9536304532322537 (change=60.449592278112455 %)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,018 | INFO     | sum of square deviations: 3972995422.5
[2025-05-27 11:40:13] 2025-05-27 09:40:02,020 | INFO     | sum of deviations: -40849262409.49999
[2025-05-27 11:40:13] 2025-05-27 09:40:02,020 | INFO     | mean x: 1748331681.5
[2025-05-27 11:40:13] 2025-05-27 09:40:02,020 | INFO     | mean y: 2343585.081196581
[2025-05-27 11:40:13] 2025-05-27 09:40:02,020 | INFO     | -- intersect: 17978216205.517338
[2025-05-27 11:40:13] 2025-05-27 09:40:02,020 | INFO     | intersect: 17978216205.517338
[2025-05-27 11:40:13] 2025-05-27 09:40:02,021 | INFO     | chi2: 0.919544815237925
[2025-05-27 11:40:13] 2025-05-27 09:40:02,021 | INFO     | current chi2=0.919544815237925 (change=3.5743025905683066 %)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,021 | INFO     | left removable region: 20
[2025-05-27 11:40:13] 2025-05-27 09:40:02,021 | INFO     | sum of square deviations: 2996454322.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,023 | INFO     | sum of deviations: -12028414869.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,023 | INFO     | mean x: 1748331651.0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,023 | INFO     | mean y: 2344255.953051643
[2025-05-27 11:40:13] 2025-05-27 09:40:02,023 | INFO     | -- intersect: 7020525134.744275
[2025-05-27 11:40:13] 2025-05-27 09:40:02,023 | INFO     | intersect: 7020525134.744275
[2025-05-27 11:40:13] 2025-05-27 09:40:02,024 | INFO     | chi2: 0.05534673855604798
[2025-05-27 11:40:13] 2025-05-27 09:40:02,024 | INFO     | -- intersect: 7020525134.744275
[2025-05-27 11:40:13] 2025-05-27 09:40:02,024 | INFO     | current memory leak: -4.01 B/s (using 213 data points, chi2=0.06)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,025 | INFO     | ..............................
[2025-05-27 11:40:13] 2025-05-27 09:40:02,025 | INFO     | . Timing measurements:
[2025-05-27 11:40:13] 2025-05-27 09:40:02,025 | INFO     | . get job = 0 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,025 | INFO     | . initial setup = 1 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,025 | INFO     | . payload setup = 10 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,025 | INFO     | . stage-in = 0 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,025 | INFO     | . payload execution = 14831 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,026 | INFO     | . stage-out = 1 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,026 | INFO     | . log creation = 0 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,026 | INFO     | ..............................
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | 
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | job summary report
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | --------------------------------------------------
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | PanDA job id: 6665747674
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | task id: 44871837
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | errors: (none)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | pilot state: finished 
[2025-05-27 11:40:13] 2025-05-27 09:40:02,129 | INFO     | transexitcode: 0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | exeerrorcode: 0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | exeerrordiag: 
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | exitcode: 0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | exitmsg: OK
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | cpuconsumptiontime: 56888 s
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | nevents: 400
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | neventsw: 0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | pid: 400245
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | pgrp: 400245
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | corecount: 4
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | event service: False
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | sizes: {0: 2405074, 1: 2405273, 6: 2405479, 12: 2405507, 14846: 2436059, 14849: 2445206, 14853: 2445320}
[2025-05-27 11:40:13] 2025-05-27 09:40:02,130 | INFO     | --------------------------------------------------
[2025-05-27 11:40:13] 2025-05-27 09:40:02,131 | INFO     | 
[2025-05-27 11:40:13] 2025-05-27 09:40:02,131 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-05-27 11:40:13] 2025-05-27 09:40:02,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,154 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | job 6665747674 has completed (purged errors)
[2025-05-27 11:40:13] 2025-05-27 09:40:02,156 | INFO     | overall cleanup function is called
[2025-05-27 11:40:13] 2025-05-27 09:40:03,164 | INFO     | --- collectZombieJob: --- 10, [400245]
[2025-05-27 11:40:13] 2025-05-27 09:40:03,164 | INFO     | zombie collector waiting for pid 400245
[2025-05-27 11:40:13] 2025-05-27 09:40:03,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 11:40:13] 2025-05-27 09:40:03,164 | INFO     | collected zombie processes
[2025-05-27 11:40:13] 2025-05-27 09:40:03,164 | INFO     | will attempt to kill all subprocesses of pid=400245
[2025-05-27 11:40:13] 2025-05-27 09:40:03,518 | INFO     | process IDs to be killed: [400245] (in reverse order)
[2025-05-27 11:40:13] 2025-05-27 09:40:03,632 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 11:40:13] 2025-05-27 09:40:03,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 11:40:13] 2025-05-27 09:40:03,642 | INFO     | did not find any defunct processes belonging to 400245
[2025-05-27 11:40:13] 2025-05-27 09:40:03,652 | INFO     | did not find any defunct processes belonging to 400245
[2025-05-27 11:40:13] 2025-05-27 09:40:03,652 | INFO     | ready for new job
[2025-05-27 11:40:13] 2025-05-27 09:40:03,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 11:40:13] 2025-05-27 09:40:03,655 | INFO     | **************************************
[2025-05-27 11:40:13] 2025-05-27 09:40:03,655 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 11:40:13] 2025-05-27 09:40:03,655 | INFO     | **************************************
[2025-05-27 11:40:13] 2025-05-27 09:40:03,655 | INFO     | 
[2025-05-27 11:40:13] 2025-05-27 09:40:03,659 | INFO     | architecture information:
[2025-05-27 11:40:13] 2025-05-27 09:40:03,659 | INFO     | executing command: cat /etc/os-release
[2025-05-27 11:40:13] 2025-05-27 09:40:03,674 | INFO     | cat /etc/os-release:
[2025-05-27 11:40:13] NAME="CentOS Linux"
[2025-05-27 11:40:13] VERSION="7 (Core)"
[2025-05-27 11:40:13] ID="centos"
[2025-05-27 11:40:13] ID_LIKE="rhel fedora"
[2025-05-27 11:40:13] VERSION_ID="7"
[2025-05-27 11:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 11:40:13] ANSI_COLOR="0;31"
[2025-05-27 11:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 11:40:13] HOME_URL="https://www.centos.org/"
[2025-05-27 11:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 11:40:13] 
[2025-05-27 11:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 11:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 11:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 11:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 11:40:13] 
[2025-05-27 11:40:13] 2025-05-27 09:40:03,674 | INFO     | **************************************
[2025-05-27 11:40:13] 2025-05-27 09:40:03,940 | INFO     | 14872s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-27 11:40:13] 2025-05-27 09:40:04,175 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-05-27 11:40:13] 2025-05-27 09:40:04,191 | INFO     | sufficient remaining disk space (671197691904 B)
[2025-05-27 11:40:13] 2025-05-27 09:40:04,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 11:40:13] 2025-05-27 09:40:04,192 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 11:40:13] 2025-05-27 09:40:04,192 | INFO     | update_server=False
[2025-05-27 11:40:13] 2025-05-27 09:40:04,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 11:40:13] 2025-05-27 09:40:04,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 11:40:13] 2025-05-27 09:40:04,192 | INFO     | aborting loop
[2025-05-27 11:40:13] 2025-05-27 09:40:04,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 11:40:13] 2025-05-27 09:40:04,945 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 11:40:13] 2025-05-27 09:40:04,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 11:40:13] 2025-05-27 09:40:04,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 11:40:13] 2025-05-27 09:40:05,130 | INFO     | all data control threads have been joined
[2025-05-27 11:40:13] 2025-05-27 09:40:05,197 | INFO     | [job] retrieve thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:05,198 | INFO     | [job] job monitor thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:05,372 | INFO     | [job] validate thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:05,414 | INFO     | [data] copytool_in thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:05,576 | INFO     | [payload] validate_post thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:05,614 | INFO     | all job control threads have been joined
[2025-05-27 11:40:13] 2025-05-27 09:40:05,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 11:40:13] 2025-05-27 09:40:05,686 | INFO     | all payload control threads have been joined
[2025-05-27 11:40:13] 2025-05-27 09:40:05,731 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:06,077 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:06,136 | INFO     | [data] control thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:06,375 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:06,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:06,619 | INFO     | [job] control thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:06,691 | INFO     | [payload] control thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:06,710 | INFO     | [payload] failed_post thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:07,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 11:40:13] 2025-05-27 09:40:07,633 | INFO     | [data] copytool_out thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:08,143 | INFO     | [job] queue monitor thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:08,198 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 11:40:13] 2025-05-27 09:40:08,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23042268739392)>', '<ExcThread(monitor, started 23042033948416)>']
[2025-05-27 11:40:13] 2025-05-27 09:40:08,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 11:40:13] 2025-05-27 09:40:08,965 | INFO     | [monitor] control thread has ended
[2025-05-27 11:40:13] 2025-05-27 09:40:13,439 | INFO     | all workflow threads have been joined
[2025-05-27 11:40:13] 2025-05-27 09:40:13,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 11:40:13] 2025-05-27 09:40:13,439 | INFO     | traces error code: 0
[2025-05-27 11:40:13] 2025-05-27 09:40:13,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 11:40:13] 2025-05-27 09:40:13,577 [wrapper] ==== pilot stdout END ====
[2025-05-27 11:40:13] 2025-05-27 09:40:13,580 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 11:40:13] 2025-05-27 09:40:13,583 [wrapper] pilotpid: 391038
[2025-05-27 11:40:13] 2025-05-27 09:40:13,585 [wrapper] Pilot exit status: 0
[2025-05-27 11:40:13] 2025-05-27 09:40:13,595 [wrapper] pandaids: 6665747674
[2025-05-27 11:40:13] 2025-05-27 09:40:13,658 [wrapper] cleanup supervisor_pilot 1050985 391039
[2025-05-27 11:40:13] 2025-05-27 09:40:13,662 [wrapper] Test setup, not cleaning
[2025-05-27 11:40:13] 2025-05-27 09:40:13,665 [wrapper] apfmon messages muted
[2025-05-27 11:40:13] 2025-05-27 09:40:13,668 [wrapper] ==== wrapper stdout END ====
[2025-05-27 11:40:13] 2025-05-27 09:40:13,671 [wrapper] ==== wrapper stderr END ====
[2025-05-27 11:40:13]  *** Error codes and diagnostics ***
[2025-05-27 11:40:13]     "exeErrorCode": 0,
[2025-05-27 11:40:13]     "exeErrorDiag": "",
[2025-05-27 11:40:13]     "pilotErrorCode": 0,
[2025-05-27 11:40:13]     "pilotErrorDiag": "",
[2025-05-27 11:40:13]  *** Listing of results directory ***
[2025-05-27 11:40:13] total 418960
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc    495897 May 26 00:28 pilot3.tar.gz
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc      5111 May 26 00:43 queuedata.json
[2025-05-27 11:40:13] -rwx------ 1 boinc boinc     37140 May 26 00:43 runpilot2-wrapper.sh
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc       100 May 27 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 11:40:13] -rwxr-xr-x 1 boinc boinc      7986 May 27 07:31 run_atlas
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc       105 May 27 07:31 job.xml
[2025-05-27 11:40:13] -rw-r--r-- 2 boinc boinc 223268471 May 27 07:31 EVNT.44871834._001673.pool.root.1
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc      6635 May 27 07:31 init_data.xml
[2025-05-27 11:40:13] -rw-r--r-- 2 boinc boinc     15093 May 27 07:31 start_atlas.sh
[2025-05-27 11:40:13] drwxrwx--x 2 boinc boinc      4096 May 27 07:31 shared
[2025-05-27 11:40:13] -rw-r--r-- 2 boinc boinc    508882 May 27 07:31 input.tar.gz
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc         0 May 27 07:31 boinc_lockfile
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc      2559 May 27 07:32 pandaJob.out
[2025-05-27 11:40:13] -rw------- 1 boinc boinc    990410 May 27 07:32 agis_schedconf.cvmfs.json
[2025-05-27 11:40:13] drwx------ 4 boinc boinc      4096 May 27 07:32 pilot3
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc       531 May 27 11:39 boinc_task_state.xml
[2025-05-27 11:40:13] -rw------- 1 boinc boinc 198442800 May 27 11:39 HITS.44871837._041951.pool.root.1
[2025-05-27 11:40:13] -rw------- 1 boinc boinc        95 May 27 11:39 pilot_heartbeat.json
[2025-05-27 11:40:13] -rw------- 1 boinc boinc      1034 May 27 11:39 memory_monitor_summary.json
[2025-05-27 11:40:13] -rw------- 1 boinc boinc   1603667 May 27 11:39 agis_ddmendpoints.agis.ALL.json
[2025-05-27 11:40:13] -rw------- 1 boinc boinc    356343 May 27 11:39 log.44871837._041951.job.log.tgz.1
[2025-05-27 11:40:13] -rw------- 1 boinc boinc      7723 May 27 11:40 heartbeat.json
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc      8192 May 27 11:40 boinc_mmap_file
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc        28 May 27 11:40 wrapper_checkpoint.txt
[2025-05-27 11:40:13] -rw------- 1 boinc boinc      4479 May 27 11:40 pilotlog.txt
[2025-05-27 11:40:13] -rw------- 1 boinc boinc   1376450 May 27 11:40 log.44871837._041951.job.log.1
[2025-05-27 11:40:13] -rw------- 1 boinc boinc       357 May 27 11:40 output.list
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc       620 May 27 11:40 runtime_log
[2025-05-27 11:40:13] -rw------- 1 boinc boinc   1751040 May 27 11:40 result.tar.gz
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc      9026 May 27 11:40 runtime_log.err
[2025-05-27 11:40:13] -rw------- 1 boinc boinc       665 May 27 11:40 o2uKDmMFZd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdKVKDmV6hQkm.diag
[2025-05-27 11:40:13] -rw-r--r-- 1 boinc boinc     20625 May 27 11:40 stderr.txt
[2025-05-27 11:40:13] HITS file was successfully produced:
[2025-05-27 11:40:13] -rw------- 1 boinc boinc 198442800 May 27 11:39 shared/HITS.pool.root.1
[2025-05-27 11:40:13]  *** Contents of shared directory: ***
[2025-05-27 11:40:13] total 414064
[2025-05-27 11:40:13] -rw-r--r-- 2 boinc boinc 223268471 May 27 07:31 ATLAS.root_0
[2025-05-27 11:40:13] -rw-r--r-- 2 boinc boinc     15093 May 27 07:31 start_atlas.sh
[2025-05-27 11:40:13] -rw-r--r-- 2 boinc boinc    508882 May 27 07:31 input.tar.gz
[2025-05-27 11:40:13] -rw------- 1 boinc boinc 198442800 May 27 11:39 HITS.pool.root.1
[2025-05-27 11:40:13] -rw------- 1 boinc boinc   1751040 May 27 11:40 result.tar.gz
11:40:14 (387336): run_atlas exited; CPU time 57432.124638
11:40:14 (387336): called boinc_finish(0)

</stderr_txt>
]]>

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