Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:48:01 (553503): wrapper (7.7.26015): starting
17:48:01 (553503): wrapper: running run_atlas (--nthreads 4)
[2025-05-26 17:48:01] Arguments: --nthreads 4
[2025-05-26 17:48:01] Threads: 4
[2025-05-26 17:48:01] Checking for CVMFS
[2025-05-26 17:48:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 17:48:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 17:48:01] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 17:48:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 17:48:01] 2.9.2.0 2960 1910 88504 146448 1 55 24371937 36864001 0 130560 0 1447792 99.991 469955 3258 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-26 17:48:01] CVMFS is ok
[2025-05-26 17:48:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 17:48:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 17:48:01] Further information can be found at the LHC@home message board.
[2025-05-26 17:48:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 17:48:01] Checking for apptainer binary...
[2025-05-26 17:48:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 17:48:01] Running /usr/bin/apptainer --version
[2025-05-26 17:48:01] apptainer version 1.3.6-6.1
[2025-05-26 17:48:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 17:48:02] cosA131b
[2025-05-26 17:48:02] apptainer works
[2025-05-26 17:48:02] Set ATHENA_PROC_NUMBER=4
[2025-05-26 17:48:02] Set ATHENA_CORE_NUMBER=4
[2025-05-26 17:48:02] Starting ATLAS job with PandaID=6665740727
[2025-05-26 17:48:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 19:17:56]  *** The last 200 lines of the pilot log: ***
[2025-05-26 19:17:56] ]
[2025-05-26 19:17:56] 2025-05-26 17:17:32,378 | INFO     | transferring file log.44871837._039665.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6665740727/log.44871837._039665.job.log.tgz.1 to /local/data/boinc/
[2025-05-26 19:17:56] 2025-05-26 17:17:32,378 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6665740727/log.44871837._039665.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0396
[2025-05-26 19:17:56] 2025-05-26 17:17:32,399 | INFO     | adding to output.list: log.44871837._039665.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/a7/log.44871837._039665.job.log.tg
[2025-05-26 19:17:56] 2025-05-26 17:17:32,400 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-26 19:17:56] 2025-05-26 17:17:32,400 | INFO     | summary of transferred files:
[2025-05-26 19:17:56] 2025-05-26 17:17:32,400 | INFO     |  -- lfn=log.44871837._039665.job.log.tgz.1, status_code=0, status=transferred
[2025-05-26 19:17:56] 2025-05-26 17:17:32,400 | INFO     | stage-out finished correctly
[2025-05-26 19:17:56] 2025-05-26 17:17:32,963 | WARNING  | process 563850 can no longer be monitored (due to stat problems) - aborting
[2025-05-26 19:17:56] 2025-05-26 17:17:32,964 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665740727/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 19:17:56] 2025-05-26 17:17:32,964 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665740727/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 19:17:56] 2025-05-26 17:17:32,964 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2563955 B
[2025-05-26 19:17:56] 2025-05-26 17:17:32,964 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16761 B
[2025-05-26 19:17:56] 2025-05-26 17:17:32,965 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-26 19:17:56] 2025-05-26 17:17:32,979 | INFO     | sufficient remaining disk space (331145543680 B)
[2025-05-26 19:17:56] 2025-05-26 17:17:32,979 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-26 19:17:56] 2025-05-26 17:17:32,980 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6665740727: 2865865 B (within 2537553920 B limit)
[2025-05-26 19:17:56] 2025-05-26 17:17:32,980 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6665740727/HITS.44871837._039665.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-26 19:17:56] 2025-05-26 17:17:32,980 | INFO     | total size of present files: 0 B (workdir size: 2865865 B)
[2025-05-26 19:17:56] 2025-05-26 17:17:32,980 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6665740727/HITS.44871837._039665.pool.root.1 since it does not exist
[2025-05-26 19:17:56] 2025-05-26 17:17:33,020 | INFO     | number of running child processes to parent process 563850: 1
[2025-05-26 19:17:56] 2025-05-26 17:17:33,020 | INFO     | maximum number of monitored processes: 6
[2025-05-26 19:17:56] 2025-05-26 17:17:35,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-26 19:17:56] 2025-05-26 17:17:35,444 | INFO     | job 6665740727 has state=finished
[2025-05-26 19:17:56] 2025-05-26 17:17:35,444 | INFO     | preparing for final server update for job 6665740727 in state='finished'
[2025-05-26 19:17:56] 2025-05-26 17:17:35,445 | INFO     | this job has now completed (state=finished)
[2025-05-26 19:17:56] 2025-05-26 17:17:35,445 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-26 19:17:56] 2025-05-26 17:17:35,445 | INFO     | log transfer has been attempted: DONE
[2025-05-26 19:17:56] 2025-05-26 17:17:35,445 | INFO     | job 6665740727 has finished - writing final server update
[2025-05-26 19:17:56] 2025-05-26 17:17:35,445 | INFO     | total number of processed events: 400 (read)
[2025-05-26 19:17:56] 2025-05-26 17:17:35,524 | INFO     | monitor loop #412: job 0:6665740727 is in state 'finished'
[2025-05-26 19:17:56] 2025-05-26 17:17:35,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 19:17:56] 2025-05-26 17:17:36,116 | INFO     | executing command: lscpu
[2025-05-26 19:17:56] 2025-05-26 17:17:36,139 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 19:17:56] 2025-05-26 17:17:38,026 | INFO     | monitor loop #413: job 0:6665740727 is in state 'finished'
[2025-05-26 19:17:56] 2025-05-26 17:17:38,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 19:17:56] 2025-05-26 17:17:40,531 | INFO     | monitor loop #414: job 0:6665740727 is in state 'finished'
[2025-05-26 19:17:56] 2025-05-26 17:17:40,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 19:17:56] 2025-05-26 17:17:43,036 | INFO     | monitor loop #415: job 0:6665740727 is in state 'finished'
[2025-05-26 19:17:56] 2025-05-26 17:17:43,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 19:17:56] 2025-05-26 17:17:44,026 | INFO     | PID=557217 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-26 19:17:56] 2025-05-26 17:17:44,269 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-26 19:17:56] 2025-05-26 17:17:44,269 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665740727/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 19:17:56] 2025-05-26 17:17:44,270 | INFO     | extracted standard info from prmon json
[2025-05-26 19:17:56] 2025-05-26 17:17:44,270 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 19:17:56] 2025-05-26 17:17:44,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 19:17:56] 2025-05-26 17:17:44,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 19:17:56] 2025-05-26 17:17:44,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 19:17:56] 2025-05-26 17:17:44,271 | INFO     | fitting pss+swap vs Time
[2025-05-26 19:17:56] 2025-05-26 17:17:44,271 | INFO     | sum of square deviations: 164765880.0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | sum of deviations: -12404410329.0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | mean x: 1748277259.0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | mean y: 2503499.4567901236
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | -- intersect: 131621674225.1884
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | intersect: 131621674225.1884
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | chi2: 0.07672628436192218
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | -- intersect: 131621674225.1884
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | current memory leak: -75.29 B/s (using 81 data points, chi2=0.08)
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | ..............................
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . Timing measurements:
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . get job = 0 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . initial setup = 1 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . payload setup = 5 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . stage-in = 0 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . payload execution = 5342 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . stage-out = 0 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,272 | INFO     | . log creation = 0 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,273 | INFO     | ..............................
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | 
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | job summary report
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | --------------------------------------------------
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | PanDA job id: 6665740727
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | task id: 44871837
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | errors: (none)
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | pilot state: finished 
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | transexitcode: 0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | exeerrorcode: 0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,314 | INFO     | exeerrordiag: 
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | exitcode: 0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | exitmsg: OK
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | cpuconsumptiontime: 20429 s
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | nevents: 400
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | neventsw: 0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | pid: 563850
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | pgrp: 563850
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | corecount: 4
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | event service: False
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | sizes: {0: 2405236, 4: 2405442, 11: 2405470, 5348: 2440891, 5351: 2440919, 5360: 2441089}
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | --------------------------------------------------
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | 
[2025-05-26 19:17:56] 2025-05-26 17:17:44,315 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | job 6665740727 has completed (purged errors)
[2025-05-26 19:17:56] 2025-05-26 17:17:44,336 | INFO     | overall cleanup function is called
[2025-05-26 19:17:56] 2025-05-26 17:17:45,343 | INFO     | --- collectZombieJob: --- 10, [563850]
[2025-05-26 19:17:56] 2025-05-26 17:17:45,343 | INFO     | zombie collector waiting for pid 563850
[2025-05-26 19:17:56] 2025-05-26 17:17:45,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 19:17:56] 2025-05-26 17:17:45,343 | INFO     | collected zombie processes
[2025-05-26 19:17:56] 2025-05-26 17:17:45,343 | INFO     | will attempt to kill all subprocesses of pid=563850
[2025-05-26 19:17:56] 2025-05-26 17:17:45,388 | INFO     | process IDs to be killed: [563850] (in reverse order)
[2025-05-26 19:17:56] 2025-05-26 17:17:45,422 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 19:17:56] 2025-05-26 17:17:45,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 19:17:56] 2025-05-26 17:17:45,424 | INFO     | did not find any defunct processes belonging to 563850
[2025-05-26 19:17:56] 2025-05-26 17:17:45,426 | INFO     | did not find any defunct processes belonging to 563850
[2025-05-26 19:17:56] 2025-05-26 17:17:45,426 | INFO     | ready for new job
[2025-05-26 19:17:56] 2025-05-26 17:17:45,426 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 19:17:56] 2025-05-26 17:17:45,427 | INFO     | **************************************
[2025-05-26 19:17:56] 2025-05-26 17:17:45,427 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 19:17:56] 2025-05-26 17:17:45,427 | INFO     | **************************************
[2025-05-26 19:17:56] 2025-05-26 17:17:45,427 | INFO     | 
[2025-05-26 19:17:56] 2025-05-26 17:17:45,427 | INFO     | architecture information:
[2025-05-26 19:17:56] 2025-05-26 17:17:45,427 | INFO     | executing command: cat /etc/os-release
[2025-05-26 19:17:56] 2025-05-26 17:17:45,442 | INFO     | cat /etc/os-release:
[2025-05-26 19:17:56] NAME="CentOS Linux"
[2025-05-26 19:17:56] VERSION="7 (Core)"
[2025-05-26 19:17:56] ID="centos"
[2025-05-26 19:17:56] ID_LIKE="rhel fedora"
[2025-05-26 19:17:56] VERSION_ID="7"
[2025-05-26 19:17:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 19:17:56] ANSI_COLOR="0;31"
[2025-05-26 19:17:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 19:17:56] HOME_URL="https://www.centos.org/"
[2025-05-26 19:17:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 19:17:56] 
[2025-05-26 19:17:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 19:17:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 19:17:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 19:17:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 19:17:56] 
[2025-05-26 19:17:56] 2025-05-26 17:17:45,442 | INFO     | **************************************
[2025-05-26 19:17:56] 2025-05-26 17:17:45,945 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-26 19:17:56] 2025-05-26 17:17:45,963 | INFO     | sufficient remaining disk space (331141349376 B)
[2025-05-26 19:17:56] 2025-05-26 17:17:45,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 19:17:56] 2025-05-26 17:17:45,964 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 19:17:56] 2025-05-26 17:17:45,964 | INFO     | update_server=False
[2025-05-26 19:17:56] 2025-05-26 17:17:45,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 19:17:56] 2025-05-26 17:17:45,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 19:17:56] 2025-05-26 17:17:45,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 19:17:56] 2025-05-26 17:17:45,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 19:17:56] 2025-05-26 17:17:46,033 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 19:17:56] 2025-05-26 17:17:46,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 19:17:56] 2025-05-26 17:17:46,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 19:17:56] 2025-05-26 17:17:46,071 | INFO     | all data control threads have been joined
[2025-05-26 19:17:56] 2025-05-26 17:17:46,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 19:17:56] 2025-05-26 17:17:46,545 | INFO     | aborting loop
[2025-05-26 19:17:56] 2025-05-26 17:17:46,608 | INFO     | all payload control threads have been joined
[2025-05-26 19:17:56] 2025-05-26 17:17:46,968 | INFO     | [job] queue monitor thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:46,969 | INFO     | [job] retrieve thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,077 | INFO     | [data] control thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,447 | INFO     | [payload] validate_post thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,551 | INFO     | [job] job monitor thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,614 | INFO     | [payload] control thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,640 | INFO     | all job control threads have been joined
[2025-05-26 19:17:56] 2025-05-26 17:17:47,654 | INFO     | [payload] failed_post thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,685 | INFO     | [job] validate thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,774 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,818 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:47,970 | INFO     | [data] copytool_out thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:48,010 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:48,137 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:48,463 | INFO     | [data] copytool_in thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:48,646 | INFO     | [job] control thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:49,971 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 19:17:56] 2025-05-26 17:17:50,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378202605376)>', '<ExcThread(monitor, started 140376912426752)>']
[2025-05-26 19:17:56] 2025-05-26 17:17:51,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 19:17:56] 2025-05-26 17:17:51,060 | INFO     | [monitor] control thread has ended
[2025-05-26 19:17:56] 2025-05-26 17:17:55,857 | INFO     | all workflow threads have been joined
[2025-05-26 19:17:56] 2025-05-26 17:17:55,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 19:17:56] 2025-05-26 17:17:55,858 | INFO     | traces error code: 0
[2025-05-26 19:17:56] 2025-05-26 17:17:55,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 19:17:56] 2025-05-26 17:17:55,940 [wrapper] ==== pilot stdout END ====
[2025-05-26 19:17:56] 2025-05-26 17:17:55,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 19:17:56] 2025-05-26 17:17:55,949 [wrapper] pilotpid: 557217
[2025-05-26 19:17:56] 2025-05-26 17:17:55,954 [wrapper] Pilot exit status: 0
[2025-05-26 19:17:56] 2025-05-26 17:17:55,966 [wrapper] pandaids: 6665740727
[2025-05-26 19:17:56] 2025-05-26 17:17:55,990 [wrapper] cleanup supervisor_pilot  576086 557218
[2025-05-26 19:17:56] 2025-05-26 17:17:55,994 [wrapper] Test setup, not cleaning
[2025-05-26 19:17:56] 2025-05-26 17:17:55,998 [wrapper] apfmon messages muted
[2025-05-26 19:17:56] 2025-05-26 17:17:56,002 [wrapper] ==== wrapper stdout END ====
[2025-05-26 19:17:56] 2025-05-26 17:17:56,006 [wrapper] ==== wrapper stderr END ====
[2025-05-26 19:17:56]  *** Error codes and diagnostics ***
[2025-05-26 19:17:56]     "exeErrorCode": 0,
[2025-05-26 19:17:56]     "exeErrorDiag": "",
[2025-05-26 19:17:56]     "pilotErrorCode": 0,
[2025-05-26 19:17:56]     "pilotErrorDiag": "",
[2025-05-26 19:17:56]  *** Listing of results directory ***
[2025-05-26 19:17:56] total 415804
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc    503527 Apr  3 09:42 pilot3.tar.gz
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc      5111 May 25 21:29 queuedata.json
[2025-05-26 19:17:56] -rwx------ 1 boinc boinc     37140 May 25 21:29 runpilot2-wrapper.sh
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc       100 May 26 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 19:17:56] -rwxr-xr-x 1 boinc boinc      7986 May 26 17:48 run_atlas
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc       105 May 26 17:48 job.xml
[2025-05-26 19:17:56] -rw-r--r-- 2 boinc boinc 224303139 May 26 17:48 EVNT.44871834._001582.pool.root.1
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc      6862 May 26 17:48 init_data.xml
[2025-05-26 19:17:56] drwxrwx--x 2 boinc boinc      4096 May 26 17:48 shared
[2025-05-26 19:17:56] -rw-r--r-- 2 boinc boinc    517087 May 26 17:48 input.tar.gz
[2025-05-26 19:17:56] -rw-r--r-- 2 boinc boinc     15093 May 26 17:48 start_atlas.sh
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc         0 May 26 17:48 boinc_lockfile
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc      2558 May 26 17:48 pandaJob.out
[2025-05-26 19:17:56] -rw------- 1 boinc boinc    990394 May 26 17:48 agis_schedconf.cvmfs.json
[2025-05-26 19:17:56] -rw------- 1 boinc boinc   1603667 May 26 17:48 agis_ddmendpoints.agis.ALL.json
[2025-05-26 19:17:56] drwx------ 4 boinc boinc      4096 May 26 17:48 pilot3
[2025-05-26 19:17:56] -rw------- 1 boinc boinc 196080805 May 26 19:17 HITS.44871837._039665.pool.root.1
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc       530 May 26 19:17 boinc_task_state.xml
[2025-05-26 19:17:56] -rw------- 1 boinc boinc      1022 May 26 19:17 memory_monitor_summary.json
[2025-05-26 19:17:56] -rw------- 1 boinc boinc    254122 May 26 19:17 log.44871837._039665.job.log.tgz.1
[2025-05-26 19:17:56] -rw------- 1 boinc boinc        95 May 26 19:17 pilot_heartbeat.json
[2025-05-26 19:17:56] -rw------- 1 boinc boinc      7666 May 26 19:17 heartbeat.json
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc      8192 May 26 19:17 boinc_mmap_file
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc        27 May 26 19:17 wrapper_checkpoint.txt
[2025-05-26 19:17:56] -rw------- 1 boinc boinc      4357 May 26 19:17 pilotlog.txt
[2025-05-26 19:17:56] -rw------- 1 boinc boinc    516182 May 26 19:17 log.44871837._039665.job.log.1
[2025-05-26 19:17:56] -rw------- 1 boinc boinc       357 May 26 19:17 output.list
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc       620 May 26 19:17 runtime_log
[2025-05-26 19:17:56] -rw------- 1 boinc boinc    788480 May 26 19:17 result.tar.gz
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc      8743 May 26 19:17 runtime_log.err
[2025-05-26 19:17:56] -rw------- 1 boinc boinc       660 May 26 19:17 jenNDmpDWd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmxUKDmC1Zkon.diag
[2025-05-26 19:17:56] -rw-r--r-- 1 boinc boinc     22675 May 26 19:17 stderr.txt
[2025-05-26 19:17:56] HITS file was successfully produced:
[2025-05-26 19:17:56] -rw------- 1 boinc boinc 196080805 May 26 19:17 shared/HITS.pool.root.1
[2025-05-26 19:17:56]  *** Contents of shared directory: ***
[2025-05-26 19:17:56] total 411840
[2025-05-26 19:17:56] -rw-r--r-- 2 boinc boinc 224303139 May 26 17:48 ATLAS.root_0
[2025-05-26 19:17:56] -rw-r--r-- 2 boinc boinc    517087 May 26 17:48 input.tar.gz
[2025-05-26 19:17:56] -rw-r--r-- 2 boinc boinc     15093 May 26 17:48 start_atlas.sh
[2025-05-26 19:17:56] -rw------- 1 boinc boinc 196080805 May 26 19:17 HITS.pool.root.1
[2025-05-26 19:17:56] -rw------- 1 boinc boinc    788480 May 26 19:17 result.tar.gz
19:17:57 (553503): run_atlas exited; CPU time 20447.729732
19:17:57 (553503): called boinc_finish(0)

</stderr_txt>
]]>

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