Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:46:45 (96071): wrapper (7.7.26015): starting
21:46:45 (96071): wrapper: running run_atlas (--nthreads 12)
[2025-05-25 21:46:45] Arguments: --nthreads 12
[2025-05-25 21:46:45] Threads: 12
[2025-05-25 21:46:45] Checking for CVMFS
[2025-05-25 21:46:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 21:46:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 21:46:46] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 21:46:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 21:46:48] 2.11.5.0 238830 9798 138908 146425 2 378 25458129 45568000 38273 130560 0 98185213 99.814 59743312 18748 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-25 21:46:48] CVMFS is ok
[2025-05-25 21:46:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 21:46:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 21:46:48] Further information can be found at the LHC@home message board.
[2025-05-25 21:46:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 21:46:48] Checking for apptainer binary...
[2025-05-25 21:46:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 21:46:48] Running /usr/bin/apptainer --version
[2025-05-25 21:46:48] apptainer version 1.4.0-1.el9
[2025-05-25 21:46:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 21:46:49] wns0149.triumf.lcg
[2025-05-25 21:46:49] apptainer works
[2025-05-25 21:46:49] Set ATHENA_PROC_NUMBER=12
[2025-05-25 21:46:49] Set ATHENA_CORE_NUMBER=12
[2025-05-25 21:46:49] Starting ATLAS job with PandaID=6665750934
[2025-05-25 21:46:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 21:53:03]  *** The last 200 lines of the pilot log: ***
[2025-05-25 21:53:03] 2025-05-26 04:52:46,525 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 21:53:03] 2025-05-26 04:52:46,525 | INFO     | using path: /home/boinc/slots/1/PanDA_Pilot-6665750934/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | INFO     | extracted standard info from prmon json
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | wrong length of table data, x=[1748234969.0], y=[1607.0] (must be same and length>=4)
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | ..............................
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . Timing measurements:
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . get job = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . initial setup = 4 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . payload setup = 30 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . stage-in = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . payload execution = 68 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | . stage-out = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | . log creation = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | ..............................
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/1/PanDA_Pilot-6665750934/pilotlog.txt
[2025-05-25 21:53:03] 2025-05-26 04:52:46,630 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-25 21:53:03] - Log from pilotlog.txt -
[2025-05-25 21:53:03] 2025-05-26 04:52:46,525 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 21:53:03] 2025-05-26 04:52:46,525 | INFO     | using path: /home/boinc/slots/1/PanDA_Pilot-6665750934/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | INFO     | extracted standard info from prmon json
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | wrong length of table data, x=[1748234969.0], y=[1607.0] (must be same and length>=4)
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | ..............................
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . Timing measurements:
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . get job = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . initial setup = 4 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . payload setup = 30 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . stage-in = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . payload execution = 68 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | . stage-out = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | . log creation = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | ..............................
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/1/PanDA_Pilot-6665750934/pilotlog.txt
[2025-05-25 21:53:03] 2025-05-26 04:52:46,630 | WARNING  | 
[2025-05-25 21:53:03] [begin log extracts]
[2025-05-25 21:53:03] - Log from pilotlog.txt -
[2025-05-25 21:53:03] 2025-05-26 04:52:46,525 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 21:53:03] 2025-05-26 04:52:46,525 | INFO     | using path: /home/boinc/slots/1/PanDA_Pilot-6665750934/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | INFO     | extracted standard info from prmon json
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 21:53:03] 2025-05-26 04:52:46,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 21:53:03] 2025-05-26 04:52:46,527 | WARNING  | wrong length of table data, x=[1748234969.0], y=[1607.0] (must be same and length>=4)
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | ..............................
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . Timing measurements:
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . get job = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . initial setup = 4 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . payload setup = 30 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . stage-in = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,528 | INFO     | . payload execution = 68 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | . stage-out = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | . log creation = 0 s
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | ..............................
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 21:53:03] 2025-05-26 04:52:46,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/1/PanDA_Pilot-6665750934/pilotlog.txt
[2025-05-25 21:53:03] [end log extracts]
[2025-05-25 21:53:03] 2025-05-26 04:52:46,631 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-25 21:53:03] 2025-05-26 04:52:46,632 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-25 21:53:03] 2025-05-26 04:52:47,109 | INFO     | 
[2025-05-25 21:53:03] 2025-05-26 04:52:47,109 | INFO     | job summary report
[2025-05-25 21:53:03] 2025-05-26 04:52:47,109 | INFO     | --------------------------------------------------
[2025-05-25 21:53:03] 2025-05-26 04:52:47,109 | INFO     | PanDA job id: 6665750934
[2025-05-25 21:53:03] 2025-05-26 04:52:47,109 | INFO     | task id: 44871837
[2025-05-25 21:53:03] 2025-05-26 04:52:47,109 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-25 21:50:12,472 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-25 21:53:03] 2025-05-26 04:52:47,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | pilot state: failed 
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | transexitcode: 65
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | exeerrorcode: 65
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | exitcode: 65
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | cpuconsumptiontime: 31 s
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | nevents: 0
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | neventsw: 0
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | pid: 123081
[2025-05-25 21:53:03] 2025-05-26 04:52:47,110 | INFO     | pgrp: 123081
[2025-05-25 21:53:03] 2025-05-26 04:52:47,111 | INFO     | corecount: 12
[2025-05-25 21:53:03] 2025-05-26 04:52:47,111 | INFO     | event service: False
[2025-05-25 21:53:03] 2025-05-26 04:52:47,111 | INFO     | sizes: {0: 2393510, 1: 2393566, 2: 2393793, 3: 2393793, 15: 2393821, 26: 2393849, 30: 2394211, 37: 2394239, 102: 2417427, 103: 2421662, 106: 2421690, 247: 2422112}
[2025-05-25 21:53:03] 2025-05-26 04:52:47,111 | INFO     | --------------------------------------------------
[2025-05-25 21:53:03] 2025-05-26 04:52:47,111 | INFO     | 
[2025-05-25 21:53:03] 2025-05-26 04:52:47,111 | INFO     | executing command: ls -lF /home/boinc/slots/1
[2025-05-25 21:53:03] 2025-05-26 04:52:47,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 21:53:03] 2025-05-26 04:52:47,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 21:53:03] 2025-05-26 04:52:47,255 | INFO     | job 6665750934 has completed (purged errors)
[2025-05-25 21:53:03] 2025-05-26 04:52:47,255 | INFO     | overall cleanup function is called
[2025-05-25 21:53:03] 2025-05-26 04:52:48,285 | INFO     | --- collectZombieJob: --- 10, [123081]
[2025-05-25 21:53:03] 2025-05-26 04:52:48,285 | INFO     | zombie collector waiting for pid 123081
[2025-05-25 21:53:03] 2025-05-26 04:52:48,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 21:53:03] 2025-05-26 04:52:48,285 | INFO     | collected zombie processes
[2025-05-25 21:53:03] 2025-05-26 04:52:48,285 | INFO     | will attempt to kill all subprocesses of pid=123081
[2025-05-25 21:53:03] 2025-05-26 04:52:49,861 | INFO     | process IDs to be killed: [123081] (in reverse order)
[2025-05-25 21:53:03] 2025-05-26 04:52:50,326 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 21:53:03] 2025-05-26 04:52:50,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 21:53:03] 2025-05-26 04:52:50,357 | INFO     | did not find any defunct processes belonging to 123081
[2025-05-25 21:53:03] 2025-05-26 04:52:50,381 | INFO     | did not find any defunct processes belonging to 123081
[2025-05-25 21:53:03] 2025-05-26 04:52:50,382 | INFO     | ready for new job
[2025-05-25 21:53:03] 2025-05-26 04:52:50,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 21:53:03] 2025-05-26 04:52:50,384 | INFO     | **************************************
[2025-05-25 21:53:03] 2025-05-26 04:52:50,384 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 21:53:03] 2025-05-26 04:52:50,384 | INFO     | **************************************
[2025-05-25 21:53:03] 2025-05-26 04:52:50,384 | INFO     | 
[2025-05-25 21:53:03] 2025-05-26 04:52:50,391 | INFO     | architecture information:
[2025-05-25 21:53:03] 2025-05-26 04:52:50,392 | INFO     | executing command: cat /etc/os-release
[2025-05-25 21:53:03] 2025-05-26 04:52:50,508 | INFO     | cat /etc/os-release:
[2025-05-25 21:53:03] NAME="CentOS Linux"
[2025-05-25 21:53:03] VERSION="7 (Core)"
[2025-05-25 21:53:03] ID="centos"
[2025-05-25 21:53:03] ID_LIKE="rhel fedora"
[2025-05-25 21:53:03] VERSION_ID="7"
[2025-05-25 21:53:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 21:53:03] ANSI_COLOR="0;31"
[2025-05-25 21:53:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 21:53:03] HOME_URL="https://www.centos.org/"
[2025-05-25 21:53:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 21:53:03] 
[2025-05-25 21:53:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 21:53:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 21:53:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 21:53:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 21:53:03] 
[2025-05-25 21:53:03] 2025-05-26 04:52:50,508 | INFO     | **************************************
[2025-05-25 21:53:03] 2025-05-26 04:52:51,012 | INFO     | executing command: df -mP /home/boinc/slots/1
[2025-05-25 21:53:03] 2025-05-26 04:52:51,135 | INFO     | sufficient remaining disk space (1874413486080 B)
[2025-05-25 21:53:03] 2025-05-26 04:52:51,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 21:53:03] 2025-05-26 04:52:51,136 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 21:53:03] 2025-05-26 04:52:51,136 | INFO     | update_server=False
[2025-05-25 21:53:03] 2025-05-26 04:52:51,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 21:53:03] 2025-05-26 04:52:51,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:53:03] 2025-05-26 04:52:51,137 | INFO     | aborting loop
[2025-05-25 21:53:03] 2025-05-26 04:52:51,183 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 21:53:03] 2025-05-26 04:52:51,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 21:53:03] 2025-05-26 04:52:51,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 21:53:03] 2025-05-26 04:52:51,228 | INFO     | all payload control threads have been joined
[2025-05-25 21:53:03] 2025-05-26 04:52:51,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 21:53:03] 2025-05-26 04:52:51,748 | INFO     | all data control threads have been joined
[2025-05-25 21:53:03] 2025-05-26 04:52:51,749 | INFO     | all job control threads have been joined
[2025-05-25 21:53:03] 2025-05-26 04:52:51,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 21:53:03] 2025-05-26 04:52:52,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:53:03] 2025-05-26 04:52:52,143 | INFO     | [job] retrieve thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,143 | INFO     | [job] job monitor thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,234 | INFO     | [payload] control thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,492 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,606 | INFO     | [job] validate thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,754 | INFO     | [data] control thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,756 | INFO     | [job] control thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:52,847 | INFO     | [payload] failed_post thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:53,008 | INFO     | [data] copytool_in thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:53,136 | INFO     | [job] queue monitor thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:53,244 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:53,493 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:53,650 | INFO     | [payload] validate_post thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:53,961 | INFO     | [data] copytool_out thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:55,426 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 21:53:03] 2025-05-26 04:52:56,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736656152384)>', '<ExcThread(monitor, started 139736249247488)>']
[2025-05-25 21:53:03] 2025-05-26 04:52:57,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 21:53:03] 2025-05-26 04:52:57,219 | INFO     | [monitor] control thread has ended
[2025-05-25 21:53:03] 2025-05-26 04:53:01,447 | INFO     | all workflow threads have been joined
[2025-05-25 21:53:03] 2025-05-26 04:53:01,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 21:53:03] 2025-05-26 04:53:01,447 | INFO     | traces error code: 0
[2025-05-25 21:53:03] 2025-05-26 04:53:01,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 21:53:03] 2025-05-26 04:53:01,983 [wrapper] ==== pilot stdout END ====
[2025-05-25 21:53:03] 2025-05-26 04:53:02,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 21:53:03] 2025-05-26 04:53:02,020 [wrapper] pilotpid: 105143
[2025-05-25 21:53:03] 2025-05-26 04:53:02,031 [wrapper] Pilot exit status: 0
[2025-05-25 21:53:03] 2025-05-26 04:53:02,180 [wrapper] pandaids: 6665750934
[2025-05-25 21:53:03] 2025-05-26 04:53:02,463 [wrapper] cleanup supervisor_pilot  105149 105144
[2025-05-25 21:53:03] 2025-05-26 04:53:02,470 [wrapper] Test setup, not cleaning
[2025-05-25 21:53:03] 2025-05-26 04:53:02,500 [wrapper] apfmon messages muted
[2025-05-25 21:53:03] 2025-05-26 04:53:02,533 [wrapper] ==== wrapper stdout END ====
[2025-05-25 21:53:03] 2025-05-26 04:53:02,556 [wrapper] ==== wrapper stderr END ====
[2025-05-25 21:53:03]  *** Error codes and diagnostics ***
[2025-05-25 21:53:03]     "exeErrorCode": 65,
[2025-05-25 21:53:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 21:53:03]     "pilotErrorCode": 1305,
[2025-05-25 21:53:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 21:53:03]  *** Listing of results directory ***
[2025-05-25 21:53:03] total 223948
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc      5111 May 25 18:12 queuedata.json
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc    495897 May 25 18:12 pilot3.tar.gz
[2025-05-25 21:53:03] -rwx------. 1 boinc boinc     37140 May 25 18:13 runpilot2-wrapper.sh
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc       100 May 25 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 21:53:03] -rwxr-xr-x. 1 boinc boinc      7986 May 25 21:46 run_atlas
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc       105 May 25 21:46 job.xml
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc      6597 May 25 21:46 init_data.xml
[2025-05-25 21:53:03] -rw-r--r--. 2 boinc boinc 225285459 May 25 21:46 EVNT.44871834._001735.pool.root.1
[2025-05-25 21:53:03] -rw-r--r--. 2 boinc boinc     15093 May 25 21:46 start_atlas.sh
[2025-05-25 21:53:03] drwxrwx--x. 2 boinc boinc      4096 May 25 21:46 shared
[2025-05-25 21:53:03] -rw-r--r--. 2 boinc boinc    508880 May 25 21:46 input.tar.gz
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc         0 May 25 21:46 boinc_lockfile
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc      2558 May 25 21:46 pandaJob.out
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc    990811 May 25 21:47 agis_schedconf.cvmfs.json
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc   1596740 May 25 21:47 agis_ddmendpoints.agis.ALL.json
[2025-05-25 21:53:03] drwx------. 4 boinc boinc      4096 May 25 21:47 pilot3
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc       967 May 25 21:50 memory_monitor_summary.json
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc     21375 May 25 21:50 log.44871837._043485.job.log.tgz.1
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc        95 May 25 21:52 pilot_heartbeat.json
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc      8327 May 25 21:52 heartbeat.json
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc       525 May 25 21:52 boinc_task_state.xml
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc      8192 May 25 21:52 boinc_mmap_file
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc        23 May 25 21:52 wrapper_checkpoint.txt
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc      4352 May 25 21:53 pilotlog.txt
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc     81347 May 25 21:53 log.44871837._043485.job.log.1
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc       188 May 25 21:53 output.list
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc       620 May 25 21:53 runtime_log
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc    122880 May 25 21:53 result.tar.gz
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc      8484 May 25 21:53 runtime_log.err
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc       645 May 25 21:53 Ja9KDm3Zbd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJZVKDmOdeUDm.diag
[2025-05-25 21:53:03] -rw-r--r--. 1 boinc boinc     21676 May 25 21:53 stderr.txt
[2025-05-25 21:53:03] No HITS result produced
[2025-05-25 21:53:03]  *** Contents of shared directory: ***
[2025-05-25 21:53:03] total 220648
[2025-05-25 21:53:03] -rw-r--r--. 2 boinc boinc 225285459 May 25 21:46 ATLAS.root_0
[2025-05-25 21:53:03] -rw-r--r--. 2 boinc boinc     15093 May 25 21:46 start_atlas.sh
[2025-05-25 21:53:03] -rw-r--r--. 2 boinc boinc    508880 May 25 21:46 input.tar.gz
[2025-05-25 21:53:03] -rw-------. 1 boinc boinc    122880 May 25 21:53 result.tar.gz
21:53:04 (96071): run_atlas exited; CPU time 53.662329
21:53:04 (96071): called boinc_finish(0)

</stderr_txt>
]]>

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