Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:39:52 (45914): wrapper (7.7.26015): starting
23:39:52 (45914): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 23:39:52] Arguments: --nthreads 8
[2025-05-25 23:39:52] Threads: 8
[2025-05-25 23:39:52] Checking for CVMFS
[2025-05-25 23:39:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 23:39:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 23:39:53] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 23:39:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 23:39:53] 2.11.2.0 5089 15294 257040 146424 2 328 16372243 18432001 10582 130560 0 52502804 99.454 61801298 36149 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 23:39:53] CVMFS is ok
[2025-05-25 23:39:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 23:39:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 23:39:53] Further information can be found at the LHC@home message board.
[2025-05-25 23:39:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 23:39:53] Checking for apptainer binary...
[2025-05-25 23:39:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 23:39:53] Running /usr/bin/apptainer --version
[2025-05-25 23:39:53] apptainer version 1.3.2-1.el7
[2025-05-25 23:39:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 23:39:57] c-211-40.aglt2.org
[2025-05-25 23:39:57] apptainer works
[2025-05-25 23:39:57] Set ATHENA_PROC_NUMBER=8
[2025-05-25 23:39:57] Set ATHENA_CORE_NUMBER=8
[2025-05-25 23:39:57] Starting ATLAS job with PandaID=6665737256
[2025-05-25 23:39:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 05:29:26]  *** The last 200 lines of the pilot log: ***
[2025-05-26 05:29:26] 2025-05-26 09:29:10,669 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665737256/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,670 | INFO     | extracted standard info from prmon json
[2025-05-26 05:29:26] 2025-05-26 09:29:10,670 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 05:29:26] 2025-05-26 09:29:10,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 05:29:26] 2025-05-26 09:29:10,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 05:29:26] 2025-05-26 09:29:10,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 05:29:26] 2025-05-26 09:29:10,676 | INFO     | fitting pss+swap vs Time
[2025-05-26 05:29:26] 2025-05-26 09:29:10,676 | INFO     | sum of square deviations: 12187114934.64705
[2025-05-26 05:29:26] 2025-05-26 09:29:10,679 | INFO     | sum of deviations: 104483037397.55875
[2025-05-26 05:29:26] 2025-05-26 09:29:10,679 | INFO     | mean x: 1748241349.8529413
[2025-05-26 05:29:26] 2025-05-26 09:29:10,679 | INFO     | mean y: 2469387.4911764706
[2025-05-26 05:29:26] 2025-05-26 09:29:10,679 | INFO     | -- intersect: -14985619862.192549
[2025-05-26 05:29:26] 2025-05-26 09:29:10,679 | INFO     | intersect: -14985619862.192549
[2025-05-26 05:29:26] 2025-05-26 09:29:10,680 | INFO     | chi2: 3.264610925119147
[2025-05-26 05:29:26] 2025-05-26 09:29:10,680 | INFO     | sum of square deviations: 11657336949.014973
[2025-05-26 05:29:26] 2025-05-26 09:29:10,682 | INFO     | sum of deviations: 102099773993.41805
[2025-05-26 05:29:26] 2025-05-26 09:29:10,682 | INFO     | mean x: 1748241197.358209
[2025-05-26 05:29:26] 2025-05-26 09:29:10,682 | INFO     | mean y: 2468701.4298507464
[2025-05-26 05:29:26] 2025-05-26 09:29:10,683 | INFO     | -- intersect: -15309350105.638105
[2025-05-26 05:29:26] 2025-05-26 09:29:10,683 | INFO     | intersect: -15309350105.638105
[2025-05-26 05:29:26] 2025-05-26 09:29:10,683 | INFO     | chi2: 3.266237809787502
[2025-05-26 05:29:26] 2025-05-26 09:29:10,683 | INFO     | current chi2=3.266237809787502 (change=-0.04983395282535821 %)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,683 | INFO     | right removable region: 334
[2025-05-26 05:29:26] 2025-05-26 09:29:10,683 | INFO     | sum of square deviations: 11657263749.014965
[2025-05-26 05:29:26] 2025-05-26 09:29:10,686 | INFO     | sum of deviations: 9919941066.955225
[2025-05-26 05:29:26] 2025-05-26 09:29:10,686 | INFO     | mean x: 1748241502.358209
[2025-05-26 05:29:26] 2025-05-26 09:29:10,686 | INFO     | mean y: 2496527.1253731344
[2025-05-26 05:29:26] 2025-05-26 09:29:10,686 | INFO     | -- intersect: -1485198445.5189688
[2025-05-26 05:29:26] 2025-05-26 09:29:10,686 | INFO     | intersect: -1485198445.5189688
[2025-05-26 05:29:26] 2025-05-26 09:29:10,687 | INFO     | chi2: 0.06028779548515306
[2025-05-26 05:29:26] 2025-05-26 09:29:10,687 | INFO     | current chi2=0.06028779548515306 (change=98.153293091643 %)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,687 | INFO     | sum of square deviations: 11142994250.863615
[2025-05-26 05:29:26] 2025-05-26 09:29:10,689 | INFO     | sum of deviations: 8289254.181821108
[2025-05-26 05:29:26] 2025-05-26 09:29:10,689 | INFO     | mean x: 1748241654.8636363
[2025-05-26 05:29:26] 2025-05-26 09:29:10,689 | INFO     | mean y: 2499447.6484848484
[2025-05-26 05:29:26] 2025-05-26 09:29:10,690 | INFO     | -- intersect: 1198933.700244311
[2025-05-26 05:29:26] 2025-05-26 09:29:10,690 | INFO     | intersect: 1198933.700244311
[2025-05-26 05:29:26] 2025-05-26 09:29:10,690 | INFO     | chi2: 0.010580492905012619
[2025-05-26 05:29:26] 2025-05-26 09:29:10,690 | INFO     | current chi2=0.010580492905012619 (change=82.45002521676506 %)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,690 | INFO     | sum of square deviations: 10644073877.69236
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | sum of deviations: 1861875836.630769
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | mean x: 1748241807.3692307
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | mean y: 2498880.2030769233
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | -- intersect: -303305947.4532078
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | intersect: -303305947.4532078
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | chi2: 0.009402736464742842
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | current chi2=0.009402736464742842 (change=11.131394830497955 %)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,693 | INFO     | left removable region: 30
[2025-05-26 05:29:26] 2025-05-26 09:29:10,694 | INFO     | sum of square deviations: 8711097456.197332
[2025-05-26 05:29:26] 2025-05-26 09:29:10,696 | INFO     | sum of deviations: 8437488429.703947
[2025-05-26 05:29:26] 2025-05-26 09:29:10,696 | INFO     | mean x: 1748242081.8881578
[2025-05-26 05:29:26] 2025-05-26 09:29:10,696 | INFO     | mean y: 2496021.1677631577
[2025-05-26 05:29:26] 2025-05-26 09:29:10,696 | INFO     | -- intersect: -1690835090.3741858
[2025-05-26 05:29:26] 2025-05-26 09:29:10,696 | INFO     | intersect: -1690835090.3741858
[2025-05-26 05:29:26] 2025-05-26 09:29:10,697 | INFO     | chi2: 0.0011343485894947795
[2025-05-26 05:29:26] 2025-05-26 09:29:10,697 | INFO     | -- intersect: -1690835090.3741858
[2025-05-26 05:29:26] 2025-05-26 09:29:10,697 | INFO     | current memory leak: 0.97 B/s (using 304 data points, chi2=0.00)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | ..............................
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . Timing measurements:
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . get job = 0 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . initial setup = 4 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . payload setup = 58 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . stage-in = 0 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . payload execution = 20762 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . stage-out = 2 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | . log creation = 0 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,698 | INFO     | ..............................
[2025-05-26 05:29:26] 2025-05-26 09:29:10,780 | INFO     | 
[2025-05-26 05:29:26] 2025-05-26 09:29:10,781 | INFO     | job summary report
[2025-05-26 05:29:26] 2025-05-26 09:29:10,781 | INFO     | --------------------------------------------------
[2025-05-26 05:29:26] 2025-05-26 09:29:10,781 | INFO     | PanDA job id: 6665737256
[2025-05-26 05:29:26] 2025-05-26 09:29:10,783 | INFO     | task id: 44871837
[2025-05-26 05:29:26] 2025-05-26 09:29:10,783 | INFO     | errors: (none)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,783 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 05:29:26] 2025-05-26 09:29:10,783 | INFO     | pilot state: finished 
[2025-05-26 05:29:26] 2025-05-26 09:29:10,783 | INFO     | transexitcode: 0
[2025-05-26 05:29:26] 2025-05-26 09:29:10,783 | INFO     | exeerrorcode: 0
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | exeerrordiag: 
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | exitcode: 0
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | exitmsg: OK
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | cpuconsumptiontime: 44085 s
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | nevents: 400
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | neventsw: 0
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | pid: 64265
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | pgrp: 64265
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | corecount: 8
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | event service: False
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | sizes: {0: 2393740, 11: 2393740, 21: 2393768, 24: 2394002, 32: 2394030, 20824: 2427406, 20827: 2436403, 20846: 2436517}
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | --------------------------------------------------
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | 
[2025-05-26 05:29:26] 2025-05-26 09:29:10,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-26 05:29:26] 2025-05-26 09:29:10,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,807 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,809 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 05:29:26] 2025-05-26 09:29:10,809 | INFO     | job 6665737256 has completed (purged errors)
[2025-05-26 05:29:26] 2025-05-26 09:29:10,809 | INFO     | overall cleanup function is called
[2025-05-26 05:29:26] 2025-05-26 09:29:11,817 | INFO     | --- collectZombieJob: --- 10, [64265]
[2025-05-26 05:29:26] 2025-05-26 09:29:11,817 | INFO     | zombie collector waiting for pid 64265
[2025-05-26 05:29:26] 2025-05-26 09:29:11,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 05:29:26] 2025-05-26 09:29:11,817 | INFO     | collected zombie processes
[2025-05-26 05:29:26] 2025-05-26 09:29:11,818 | INFO     | will attempt to kill all subprocesses of pid=64265
[2025-05-26 05:29:26] 2025-05-26 09:29:12,018 | INFO     | process IDs to be killed: [64265] (in reverse order)
[2025-05-26 05:29:26] 2025-05-26 09:29:12,093 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 05:29:26] 2025-05-26 09:29:12,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 05:29:26] 2025-05-26 09:29:12,100 | INFO     | did not find any defunct processes belonging to 64265
[2025-05-26 05:29:26] 2025-05-26 09:29:12,104 | INFO     | did not find any defunct processes belonging to 64265
[2025-05-26 05:29:26] 2025-05-26 09:29:12,104 | INFO     | ready for new job
[2025-05-26 05:29:26] 2025-05-26 09:29:12,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 05:29:26] 2025-05-26 09:29:12,107 | INFO     | **************************************
[2025-05-26 05:29:26] 2025-05-26 09:29:12,107 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 05:29:26] 2025-05-26 09:29:12,107 | INFO     | **************************************
[2025-05-26 05:29:26] 2025-05-26 09:29:12,107 | INFO     | 
[2025-05-26 05:29:26] 2025-05-26 09:29:12,110 | INFO     | architecture information:
[2025-05-26 05:29:26] 2025-05-26 09:29:12,111 | INFO     | executing command: cat /etc/os-release
[2025-05-26 05:29:26] 2025-05-26 09:29:12,130 | INFO     | cat /etc/os-release:
[2025-05-26 05:29:26] NAME="CentOS Linux"
[2025-05-26 05:29:26] VERSION="7 (Core)"
[2025-05-26 05:29:26] ID="centos"
[2025-05-26 05:29:26] ID_LIKE="rhel fedora"
[2025-05-26 05:29:26] VERSION_ID="7"
[2025-05-26 05:29:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 05:29:26] ANSI_COLOR="0;31"
[2025-05-26 05:29:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 05:29:26] HOME_URL="https://www.centos.org/"
[2025-05-26 05:29:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 05:29:26] 
[2025-05-26 05:29:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 05:29:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 05:29:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 05:29:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 05:29:26] 
[2025-05-26 05:29:26] 2025-05-26 09:29:12,130 | INFO     | **************************************
[2025-05-26 05:29:26] 2025-05-26 09:29:12,633 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-26 05:29:26] 2025-05-26 09:29:12,651 | INFO     | sufficient remaining disk space (75259445248 B)
[2025-05-26 05:29:26] 2025-05-26 09:29:12,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 05:29:26] 2025-05-26 09:29:12,651 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 05:29:26] 2025-05-26 09:29:12,651 | INFO     | update_server=False
[2025-05-26 05:29:26] 2025-05-26 09:29:12,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | INFO     | aborting loop
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 05:29:26] 2025-05-26 09:29:12,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 05:29:26] 2025-05-26 09:29:12,960 | INFO     | all job control threads have been joined
[2025-05-26 05:29:26] 2025-05-26 09:29:13,160 | INFO     | all payload control threads have been joined
[2025-05-26 05:29:26] 2025-05-26 09:29:13,341 | INFO     | all data control threads have been joined
[2025-05-26 05:29:26] 2025-05-26 09:29:13,657 | INFO     | [job] retrieve thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:13,658 | INFO     | [job] queue monitor thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:13,658 | INFO     | [job] job monitor thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:13,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:13,819 | INFO     | [data] copytool_in thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:13,857 | INFO     | [job] validate thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:13,965 | INFO     | [job] control thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:14,156 | INFO     | [payload] failed_post thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:14,166 | INFO     | [payload] control thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:14,348 | INFO     | [data] control thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:14,497 | INFO     | [payload] validate_post thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:14,513 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:14,658 | INFO     | [data] copytool_out thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:15,006 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:15,106 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:16,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 05:29:26] 2025-05-26 09:29:20,155 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 05:29:26] 2025-05-26 09:29:20,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728533931840)>', '<ExcThread(monitor, started 139727944533760)>']
[2025-05-26 05:29:26] 2025-05-26 09:29:21,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 05:29:26] 2025-05-26 09:29:21,708 | INFO     | [monitor] control thread has ended
[2025-05-26 05:29:26] 2025-05-26 09:29:25,864 | INFO     | all workflow threads have been joined
[2025-05-26 05:29:26] 2025-05-26 09:29:25,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 05:29:26] 2025-05-26 09:29:25,865 | INFO     | traces error code: 0
[2025-05-26 05:29:26] 2025-05-26 09:29:25,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 05:29:26] 2025-05-26 09:29:25,969 [wrapper] ==== pilot stdout END ====
[2025-05-26 05:29:26] 2025-05-26 09:29:25,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 05:29:26] 2025-05-26 09:29:25,991 [wrapper] pilotpid: 51239
[2025-05-26 05:29:26] 2025-05-26 09:29:25,993 [wrapper] Pilot exit status: 0
[2025-05-26 05:29:26] 2025-05-26 09:29:26,034 [wrapper] pandaids: 6665737256
[2025-05-26 05:29:26] 2025-05-26 09:29:26,097 [wrapper] cleanup supervisor_pilot  4047 51240
[2025-05-26 05:29:26] 2025-05-26 09:29:26,100 [wrapper] Test setup, not cleaning
[2025-05-26 05:29:26] 2025-05-26 09:29:26,101 [wrapper] apfmon messages muted
[2025-05-26 05:29:26] 2025-05-26 09:29:26,103 [wrapper] ==== wrapper stdout END ====
[2025-05-26 05:29:26] 2025-05-26 09:29:26,104 [wrapper] ==== wrapper stderr END ====
[2025-05-26 05:29:26]  *** Error codes and diagnostics ***
[2025-05-26 05:29:26]     "exeErrorCode": 0,
[2025-05-26 05:29:26]     "exeErrorDiag": "",
[2025-05-26 05:29:26]     "pilotErrorCode": 0,
[2025-05-26 05:29:26]     "pilotErrorDiag": "",
[2025-05-26 05:29:26]  *** Listing of results directory ***
[2025-05-26 05:29:26] total 422212
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas    495897 May 25 13:31 pilot3.tar.gz
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas      5111 May 25 13:45 queuedata.json
[2025-05-26 05:29:26] -rwx------ 1 boincer umatlas     37140 May 25 13:46 runpilot2-wrapper.sh
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas       100 May 25 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 05:29:26] -rwxr-xr-x 1 boincer umatlas      7986 May 25 23:39 run_atlas
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas       105 May 25 23:39 job.xml
[2025-05-26 05:29:26] -rw-r--r-- 2 boincer umatlas 224355824 May 25 23:39 EVNT.44871834._001526.pool.root.1
[2025-05-26 05:29:26] -rw-r--r-- 2 boincer umatlas     15093 May 25 23:39 start_atlas.sh
[2025-05-26 05:29:26] drwxrwx--x 2 boincer umatlas      4096 May 25 23:39 shared
[2025-05-26 05:29:26] -rw-r--r-- 2 boincer umatlas    508875 May 25 23:39 input.tar.gz
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas         0 May 25 23:39 boinc_lockfile
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas      2558 May 25 23:39 pandaJob.out
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas    990811 May 25 23:40 agis_schedconf.cvmfs.json
[2025-05-26 05:29:26] drwx------ 4 boincer umatlas      4096 May 25 23:40 pilot3
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas      6337 May 26 05:20 init_data.xml
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas 199715895 May 26 05:28 HITS.44871837._038258.pool.root.1
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas       531 May 26 05:28 boinc_task_state.xml
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas        95 May 26 05:28 pilot_heartbeat.json
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas      1067 May 26 05:28 memory_monitor_summary.json
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas   1596740 May 26 05:28 agis_ddmendpoints.agis.ALL.json
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas    453515 May 26 05:28 log.44871837._038258.job.log.tgz.1
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas      7733 May 26 05:29 heartbeat.json
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas        28 May 26 05:29 wrapper_checkpoint.txt
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas      8192 May 26 05:29 boinc_mmap_file
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas      4476 May 26 05:29 pilotlog.txt
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas   1768796 May 26 05:29 log.44871837._038258.job.log.1
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas       357 May 26 05:29 output.list
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas       620 May 26 05:29 runtime_log
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas   2242560 May 26 05:29 result.tar.gz
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas       663 May 26 05:29 U05NDmobUd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVkUKDmIDRvUn.diag
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas      8660 May 26 05:29 runtime_log.err
[2025-05-26 05:29:26] -rw-r--r-- 1 boincer umatlas     20939 May 26 05:29 stderr.txt
[2025-05-26 05:29:26] HITS file was successfully produced:
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas 199715895 May 26 05:28 shared/HITS.pool.root.1
[2025-05-26 05:29:26]  *** Contents of shared directory: ***
[2025-05-26 05:29:26] total 416848
[2025-05-26 05:29:26] -rw-r--r-- 2 boincer umatlas 224355824 May 25 23:39 ATLAS.root_0
[2025-05-26 05:29:26] -rw-r--r-- 2 boincer umatlas     15093 May 25 23:39 start_atlas.sh
[2025-05-26 05:29:26] -rw-r--r-- 2 boincer umatlas    508875 May 25 23:39 input.tar.gz
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas 199715895 May 26 05:28 HITS.pool.root.1
[2025-05-26 05:29:26] -rw------- 1 boincer umatlas   2242560 May 26 05:29 result.tar.gz
05:29:28 (45914): run_atlas exited; CPU time 43674.291905
05:29:28 (45914): called boinc_finish(0)

</stderr_txt>
]]>

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