Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:21:42 (13774): wrapper (7.7.26015): starting
12:21:42 (13774): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 12:21:42] Arguments: --nthreads 8
[2025-05-26 12:21:42] Threads: 8
[2025-05-26 12:21:42] Checking for CVMFS
[2025-05-26 12:21:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 12:21:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 12:21:42] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 12:21:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 12:21:43] 2.11.2.0 347 20083 90060 146432 1 205 21771163 25165825 2942 130560 0 10822102 99.791 12703664 2332 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-26 12:21:43] CVMFS is ok
[2025-05-26 12:21:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 12:21:43] Checking for apptainer binary...
[2025-05-26 12:21:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 12:21:43] Running /usr/bin/apptainer --version
[2025-05-26 12:21:43] apptainer version 1.3.2-1.el7
[2025-05-26 12:21:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 12:21:44] cg-vwn289.simple-grid.lan
[2025-05-26 12:21:44] apptainer works
[2025-05-26 12:21:44] Set ATHENA_PROC_NUMBER=8
[2025-05-26 12:21:44] Set ATHENA_CORE_NUMBER=8
[2025-05-26 12:21:44] Starting ATLAS job with PandaID=6665737750
[2025-05-26 12:21:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 17:43:25]  *** The last 200 lines of the pilot log: ***
[2025-05-26 17:43:25] 2025-05-26 15:43:10,473 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6665737750/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,474 | INFO     | extracted standard info from prmon json
[2025-05-26 17:43:25] 2025-05-26 15:43:10,474 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 17:43:25] 2025-05-26 15:43:10,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 17:43:25] 2025-05-26 15:43:10,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 17:43:25] 2025-05-26 15:43:10,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 17:43:25] 2025-05-26 15:43:10,481 | INFO     | fitting pss+swap vs Time
[2025-05-26 17:43:25] 2025-05-26 15:43:10,481 | INFO     | sum of square deviations: 9599817202.5
[2025-05-26 17:43:25] 2025-05-26 15:43:10,485 | INFO     | sum of deviations: 23582927204.000004
[2025-05-26 17:43:25] 2025-05-26 15:43:10,485 | INFO     | mean x: 1748264526.5
[2025-05-26 17:43:25] 2025-05-26 15:43:10,485 | INFO     | mean y: 2487326.464968153
[2025-05-26 17:43:25] 2025-05-26 15:43:10,486 | INFO     | -- intersect: -4292302271.304462
[2025-05-26 17:43:25] 2025-05-26 15:43:10,486 | INFO     | intersect: -4292302271.304462
[2025-05-26 17:43:25] 2025-05-26 15:43:10,486 | INFO     | chi2: 2.5785626928924095
[2025-05-26 17:43:25] 2025-05-26 15:43:10,487 | INFO     | sum of square deviations: 9148487810.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,490 | INFO     | sum of deviations: 43916169078.000015
[2025-05-26 17:43:25] 2025-05-26 15:43:10,490 | INFO     | mean x: 1748264374.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,490 | INFO     | mean y: 2494105.996763754
[2025-05-26 17:43:25] 2025-05-26 15:43:10,490 | INFO     | -- intersect: -8389829897.288742
[2025-05-26 17:43:25] 2025-05-26 15:43:10,491 | INFO     | intersect: -8389829897.288742
[2025-05-26 17:43:25] 2025-05-26 15:43:10,491 | INFO     | chi2: 1.809030716175551
[2025-05-26 17:43:25] 2025-05-26 15:43:10,491 | INFO     | current chi2=1.809030716175551 (change=29.84344646100746 %)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,492 | INFO     | sum of square deviations: 8711530780.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,495 | INFO     | sum of deviations: 43093750668.99999
[2025-05-26 17:43:25] 2025-05-26 15:43:10,495 | INFO     | mean x: 1748264221.5
[2025-05-26 17:43:25] 2025-05-26 15:43:10,496 | INFO     | mean y: 2493818.9671052634
[2025-05-26 17:43:25] 2025-05-26 15:43:10,496 | INFO     | -- intersect: -8645729365.621628
[2025-05-26 17:43:25] 2025-05-26 15:43:10,496 | INFO     | intersect: -8645729365.621628
[2025-05-26 17:43:25] 2025-05-26 15:43:10,496 | INFO     | chi2: 1.8096832073473275
[2025-05-26 17:43:25] 2025-05-26 15:43:10,496 | INFO     | current chi2=1.8096832073473275 (change=-0.036068551293362366 %)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,497 | INFO     | right removable region: 303
[2025-05-26 17:43:25] 2025-05-26 15:43:10,497 | INFO     | sum of square deviations: 9148487810.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,500 | INFO     | sum of deviations: -32935263716.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,501 | INFO     | mean x: 1748264679.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,501 | INFO     | mean y: 2506312.1003236244
[2025-05-26 17:43:25] 2025-05-26 15:43:10,501 | INFO     | -- intersect: 6296394377.983103
[2025-05-26 17:43:25] 2025-05-26 15:43:10,501 | INFO     | intersect: 6296394377.983103
[2025-05-26 17:43:25] 2025-05-26 15:43:10,501 | INFO     | chi2: 0.91698131097404
[2025-05-26 17:43:25] 2025-05-26 15:43:10,502 | INFO     | current chi2=0.91698131097404 (change=64.43827743643303 %)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,502 | INFO     | sum of square deviations: 8711530780.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,505 | INFO     | sum of deviations: -32794610282.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,506 | INFO     | mean x: 1748264831.5
[2025-05-26 17:43:25] 2025-05-26 15:43:10,506 | INFO     | mean y: 2506247.388157895
[2025-05-26 17:43:25] 2025-05-26 15:43:10,506 | INFO     | -- intersect: 6583859773.72775
[2025-05-26 17:43:25] 2025-05-26 15:43:10,506 | INFO     | intersect: 6583859773.72775
[2025-05-26 17:43:25] 2025-05-26 15:43:10,506 | INFO     | chi2: 0.9064337097479037
[2025-05-26 17:43:25] 2025-05-26 15:43:10,507 | INFO     | current chi2=0.9064337097479037 (change=1.1502525842028746 %)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,507 | INFO     | left removable region: 20
[2025-05-26 17:43:25] 2025-05-26 15:43:10,507 | INFO     | sum of square deviations: 7028008982.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,510 | INFO     | sum of deviations: 7047987641.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,510 | INFO     | mean x: 1748264801.0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,510 | INFO     | mean y: 2506023.5406360426
[2025-05-26 17:43:25] 2025-05-26 15:43:10,510 | INFO     | -- intersect: -1750728604.1044831
[2025-05-26 17:43:25] 2025-05-26 15:43:10,511 | INFO     | intersect: -1750728604.1044831
[2025-05-26 17:43:25] 2025-05-26 15:43:10,511 | INFO     | chi2: 0.04818040207381399
[2025-05-26 17:43:25] 2025-05-26 15:43:10,511 | INFO     | -- intersect: -1750728604.1044831
[2025-05-26 17:43:25] 2025-05-26 15:43:10,511 | INFO     | current memory leak: 1.00 B/s (using 283 data points, chi2=0.05)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,512 | INFO     | ..............................
[2025-05-26 17:43:25] 2025-05-26 15:43:10,512 | INFO     | . Timing measurements:
[2025-05-26 17:43:25] 2025-05-26 15:43:10,512 | INFO     | . get job = 0 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,512 | INFO     | . initial setup = 3 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,512 | INFO     | . payload setup = 12 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,513 | INFO     | . stage-in = 0 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,513 | INFO     | . payload execution = 19128 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,513 | INFO     | . stage-out = 3 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,513 | INFO     | . log creation = 1 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,513 | INFO     | ..............................
[2025-05-26 17:43:25] 2025-05-26 15:43:10,637 | INFO     | 
[2025-05-26 17:43:25] 2025-05-26 15:43:10,637 | INFO     | job summary report
[2025-05-26 17:43:25] 2025-05-26 15:43:10,637 | INFO     | --------------------------------------------------
[2025-05-26 17:43:25] 2025-05-26 15:43:10,637 | INFO     | PanDA job id: 6665737750
[2025-05-26 17:43:25] 2025-05-26 15:43:10,637 | INFO     | task id: 44871837
[2025-05-26 17:43:25] 2025-05-26 15:43:10,637 | INFO     | errors: (none)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | pilot state: finished 
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | transexitcode: 0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | exeerrorcode: 0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | exeerrordiag: 
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | exitcode: 0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | exitmsg: OK
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | cpuconsumptiontime: 72275 s
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | nevents: 400
[2025-05-26 17:43:25] 2025-05-26 15:43:10,638 | INFO     | neventsw: 0
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | pid: 26017
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | pgrp: 26017
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | corecount: 8
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | event service: False
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | sizes: {0: 2393569, 1: 2393768, 9: 2393974, 12: 2394002, 19145: 2425877, 19148: 2446311, 19151: 2446495, 19244: 2446665}
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | --------------------------------------------------
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | 
[2025-05-26 17:43:25] 2025-05-26 15:43:10,639 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-05-26 17:43:25] 2025-05-26 15:43:10,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 17:43:25] 2025-05-26 15:43:10,921 | INFO     | job 6665737750 has completed (purged errors)
[2025-05-26 17:43:25] 2025-05-26 15:43:10,922 | INFO     | overall cleanup function is called
[2025-05-26 17:43:25] 2025-05-26 15:43:11,931 | INFO     | --- collectZombieJob: --- 10, [26017]
[2025-05-26 17:43:25] 2025-05-26 15:43:11,931 | INFO     | zombie collector waiting for pid 26017
[2025-05-26 17:43:25] 2025-05-26 15:43:11,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 17:43:25] 2025-05-26 15:43:11,931 | INFO     | collected zombie processes
[2025-05-26 17:43:25] 2025-05-26 15:43:11,931 | INFO     | will attempt to kill all subprocesses of pid=26017
[2025-05-26 17:43:25] 2025-05-26 15:43:12,040 | INFO     | process IDs to be killed: [26017] (in reverse order)
[2025-05-26 17:43:25] 2025-05-26 15:43:12,518 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 17:43:25] 2025-05-26 15:43:12,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 17:43:25] 2025-05-26 15:43:12,522 | INFO     | did not find any defunct processes belonging to 26017
[2025-05-26 17:43:25] 2025-05-26 15:43:12,525 | INFO     | did not find any defunct processes belonging to 26017
[2025-05-26 17:43:25] 2025-05-26 15:43:12,526 | INFO     | ready for new job
[2025-05-26 17:43:25] 2025-05-26 15:43:12,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 17:43:25] 2025-05-26 15:43:12,528 | INFO     | **************************************
[2025-05-26 17:43:25] 2025-05-26 15:43:12,528 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 17:43:25] 2025-05-26 15:43:12,528 | INFO     | **************************************
[2025-05-26 17:43:25] 2025-05-26 15:43:12,528 | INFO     | 
[2025-05-26 17:43:25] 2025-05-26 15:43:12,529 | INFO     | pilot is running in a VM
[2025-05-26 17:43:25] 2025-05-26 15:43:12,529 | INFO     | architecture information:
[2025-05-26 17:43:25] 2025-05-26 15:43:12,546 | INFO     | executing command: cat /etc/os-release
[2025-05-26 17:43:25] 2025-05-26 15:43:12,749 | INFO     | cat /etc/os-release:
[2025-05-26 17:43:25] NAME="CentOS Linux"
[2025-05-26 17:43:25] VERSION="7 (Core)"
[2025-05-26 17:43:25] ID="centos"
[2025-05-26 17:43:25] ID_LIKE="rhel fedora"
[2025-05-26 17:43:25] VERSION_ID="7"
[2025-05-26 17:43:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 17:43:25] ANSI_COLOR="0;31"
[2025-05-26 17:43:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 17:43:25] HOME_URL="https://www.centos.org/"
[2025-05-26 17:43:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 17:43:25] 
[2025-05-26 17:43:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 17:43:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 17:43:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 17:43:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 17:43:25] 
[2025-05-26 17:43:25] 2025-05-26 15:43:12,750 | INFO     | **************************************
[2025-05-26 17:43:25] 2025-05-26 15:43:13,252 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-05-26 17:43:25] 2025-05-26 15:43:13,484 | INFO     | sufficient remaining disk space (492807651328 B)
[2025-05-26 17:43:25] 2025-05-26 15:43:13,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 17:43:25] 2025-05-26 15:43:13,485 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 17:43:25] 2025-05-26 15:43:13,485 | INFO     | update_server=False
[2025-05-26 17:43:25] 2025-05-26 15:43:13,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 17:43:25] 2025-05-26 15:43:13,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 17:43:25] 2025-05-26 15:43:13,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 17:43:25] 2025-05-26 15:43:13,671 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 17:43:25] 2025-05-26 15:43:13,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 17:43:25] 2025-05-26 15:43:13,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 17:43:25] 2025-05-26 15:43:13,807 | INFO     | all job control threads have been joined
[2025-05-26 17:43:25] 2025-05-26 15:43:14,036 | INFO     | all data control threads have been joined
[2025-05-26 17:43:25] 2025-05-26 15:43:14,074 | INFO     | all payload control threads have been joined
[2025-05-26 17:43:25] 2025-05-26 15:43:14,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 17:43:25] 2025-05-26 15:43:14,250 | INFO     | aborting loop
[2025-05-26 17:43:25] 2025-05-26 15:43:14,491 | INFO     | [job] retrieve thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:14,628 | INFO     | [job] validate thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:14,813 | INFO     | [job] control thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:14,925 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,041 | INFO     | [data] control thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,074 | INFO     | [payload] validate_post thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,080 | INFO     | [payload] control thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,119 | INFO     | [payload] failed_post thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,230 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,256 | INFO     | [job] job monitor thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,387 | INFO     | [data] copytool_in thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,493 | INFO     | [data] copytool_out thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:15,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 17:43:25] 2025-05-26 15:43:15,883 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:16,658 | INFO     | [job] queue monitor thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:17,497 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 17:43:25] 2025-05-26 15:43:17,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381066225472)>', '<ExcThread(monitor, started 140380167190272)>']
[2025-05-26 17:43:25] 2025-05-26 15:43:18,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 17:43:25] 2025-05-26 15:43:18,700 | INFO     | [monitor] control thread has ended
[2025-05-26 17:43:25] 2025-05-26 15:43:22,985 | INFO     | all workflow threads have been joined
[2025-05-26 17:43:25] 2025-05-26 15:43:22,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 17:43:25] 2025-05-26 15:43:22,985 | INFO     | traces error code: 0
[2025-05-26 17:43:25] 2025-05-26 15:43:22,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 17:43:25] 2025-05-26 15:43:23,160 [wrapper] ==== pilot stdout END ====
[2025-05-26 17:43:25] 2025-05-26 15:43:23,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 17:43:25] 2025-05-26 15:43:23,310 [wrapper] pilotpid: 18437
[2025-05-26 17:43:25] 2025-05-26 15:43:23,321 [wrapper] Pilot exit status: 0
[2025-05-26 17:43:25] 2025-05-26 15:43:23,598 [wrapper] pandaids: 6665737750
[2025-05-26 17:43:25] 2025-05-26 15:43:24,632 [wrapper] cleanup supervisor_pilot 19548 18438
[2025-05-26 17:43:25] 2025-05-26 15:43:24,791 [wrapper] Test setup, not cleaning
[2025-05-26 17:43:25] 2025-05-26 15:43:24,945 [wrapper] apfmon messages muted
[2025-05-26 17:43:25] 2025-05-26 15:43:24,989 [wrapper] ==== wrapper stdout END ====
[2025-05-26 17:43:25] 2025-05-26 15:43:25,029 [wrapper] ==== wrapper stderr END ====
[2025-05-26 17:43:25]  *** Error codes and diagnostics ***
[2025-05-26 17:43:25]     "exeErrorCode": 0,
[2025-05-26 17:43:25]     "exeErrorDiag": "",
[2025-05-26 17:43:25]     "pilotErrorCode": 0,
[2025-05-26 17:43:25]     "pilotErrorDiag": "",
[2025-05-26 17:43:25]  *** Listing of results directory ***
[2025-05-26 17:43:25] total 419920
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc    495897 May 25 19:46 pilot3.tar.gz
[2025-05-26 17:43:25] -rwx------. 1 boinc boinc     37140 May 25 20:08 runpilot2-wrapper.sh
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc      5111 May 25 20:08 queuedata.json
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc       100 May 26 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 17:43:25] -rwxr-xr-x. 1 boinc boinc      7986 May 26 12:21 run_atlas
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc       105 May 26 12:21 job.xml
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc      6371 May 26 12:21 init_data.xml
[2025-05-26 17:43:25] -rw-r--r--. 2 boinc boinc 225552147 May 26 12:21 EVNT.44871834._001541.pool.root.1
[2025-05-26 17:43:25] -rw-r--r--. 2 boinc boinc     15093 May 26 12:21 start_atlas.sh
[2025-05-26 17:43:25] drwxrwx--x. 2 boinc boinc        68 May 26 12:21 shared
[2025-05-26 17:43:25] -rw-r--r--. 2 boinc boinc    508875 May 26 12:21 input.tar.gz
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc         0 May 26 12:21 boinc_lockfile
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc      2558 May 26 12:21 pandaJob.out
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc    989949 May 26 12:22 agis_schedconf.cvmfs.json
[2025-05-26 17:43:25] drwx------. 4 boinc boinc      4096 May 26 12:22 pilot3
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc 196463952 May 26 17:40 HITS.44871837._038637.pool.root.1
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc       531 May 26 17:40 boinc_task_state.xml
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc      1020 May 26 17:41 memory_monitor_summary.json
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc   1603667 May 26 17:41 agis_ddmendpoints.agis.ALL.json
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc    432795 May 26 17:41 log.44871837._038637.job.log.tgz.1
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc        95 May 26 17:42 pilot_heartbeat.json
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc      7693 May 26 17:43 heartbeat.json
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc      4416 May 26 17:43 pilotlog.txt
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc      8192 May 26 17:43 boinc_mmap_file
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc        28 May 26 17:43 wrapper_checkpoint.txt
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc   1647304 May 26 17:43 log.44871837._038637.job.log.1
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc       357 May 26 17:43 output.list
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc       620 May 26 17:43 runtime_log
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc   2099200 May 26 17:43 result.tar.gz
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc       658 May 26 17:43 ZbUKDmqwUd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3wOKDm4GH6in.diag
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc      8659 May 26 17:43 runtime_log.err
[2025-05-26 17:43:25] -rw-r--r--. 1 boinc boinc     20478 May 26 17:43 stderr.txt
[2025-05-26 17:43:25] HITS file was successfully produced:
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc 196463952 May 26 17:40 shared/HITS.pool.root.1
[2025-05-26 17:43:25]  *** Contents of shared directory: ***
[2025-05-26 17:43:25] total 414696
[2025-05-26 17:43:25] -rw-r--r--. 2 boinc boinc 225552147 May 26 12:21 ATLAS.root_0
[2025-05-26 17:43:25] -rw-r--r--. 2 boinc boinc     15093 May 26 12:21 start_atlas.sh
[2025-05-26 17:43:25] -rw-r--r--. 2 boinc boinc    508875 May 26 12:21 input.tar.gz
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc 196463952 May 26 17:40 HITS.pool.root.1
[2025-05-26 17:43:25] -rw-------. 1 boinc boinc   2099200 May 26 17:43 result.tar.gz
17:43:27 (13774): run_atlas exited; CPU time 72532.078273
17:43:27 (13774): called boinc_finish(0)

</stderr_txt>
]]>

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