Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:24:13 (2182229): wrapper (7.7.26015): starting
22:24:13 (2182229): wrapper: running run_atlas (--nthreads 4)
[2025-05-27 22:24:13] Arguments: --nthreads 4
[2025-05-27 22:24:13] Threads: 4
[2025-05-27 22:24:13] Checking for CVMFS
[2025-05-27 22:24:13] No cvmfs_config command found, will try listing directly
[2025-05-27 22:24:13] CVMFS is ok
[2025-05-27 22:24:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 22:24:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 22:24:13] Further information can be found at the LHC@home message board.
[2025-05-27 22:24:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 22:24:13] Checking for apptainer binary...
[2025-05-27 22:24:13] which: no apptainer in ((null))
[2025-05-27 22:24:13] apptainer is not installed, using version from CVMFS
[2025-05-27 22:24:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 22:24:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-05-27 22:24:13] apptainer works
[2025-05-27 22:24:13] Set ATHENA_PROC_NUMBER=4
[2025-05-27 22:24:13] Set ATHENA_CORE_NUMBER=4
[2025-05-27 22:24:13] Starting ATLAS job with PandaID=6665737765
[2025-05-27 22:24:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 02:10:57]  *** The last 200 lines of the pilot log: ***
[2025-05-28 02:10:57] 2025-05-28 00:10:34,080 | INFO     | PID=2186158 has CPU usage=15.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-28 02:10:57] 2025-05-28 00:10:34,080 | INFO     | .. there are 32 such processes running
[2025-05-28 02:10:57] 2025-05-28 00:10:34,253 | INFO     | monitor loop #910: job 0:6665737765 is in state 'finished'
[2025-05-28 02:10:57] 2025-05-28 00:10:34,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 02:10:57] 2025-05-28 00:10:35,942 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-28 02:10:57] 2025-05-28 00:10:35,943 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6665737765/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 02:10:57] 2025-05-28 00:10:35,944 | INFO     | extracted standard info from prmon json
[2025-05-28 02:10:57] 2025-05-28 00:10:35,944 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 02:10:57] 2025-05-28 00:10:35,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 02:10:57] 2025-05-28 00:10:35,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 02:10:57] 2025-05-28 00:10:35,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 02:10:57] 2025-05-28 00:10:35,949 | INFO     | fitting pss+swap vs Time
[2025-05-28 02:10:57] 2025-05-28 00:10:35,950 | INFO     | sum of square deviations: 3392567795.5
[2025-05-28 02:10:57] 2025-05-28 00:10:35,951 | INFO     | sum of deviations: 19333733937.999992
[2025-05-28 02:10:57] 2025-05-28 00:10:35,951 | INFO     | mean x: 1748384246.5
[2025-05-28 02:10:57] 2025-05-28 00:10:35,952 | INFO     | mean y: 2315752.2702702703
[2025-05-28 02:10:57] 2025-05-28 00:10:35,952 | INFO     | -- intersect: -9961463273.180187
[2025-05-28 02:10:57] 2025-05-28 00:10:35,952 | INFO     | intersect: -9961463273.180187
[2025-05-28 02:10:57] 2025-05-28 00:10:35,952 | INFO     | chi2: 1.5477461265305885
[2025-05-28 02:10:57] 2025-05-28 00:10:35,952 | INFO     | sum of square deviations: 3168461268.0
[2025-05-28 02:10:57] 2025-05-28 00:10:35,954 | INFO     | sum of deviations: 18820578209.0
[2025-05-28 02:10:57] 2025-05-28 00:10:35,954 | INFO     | mean x: 1748384094.0
[2025-05-28 02:10:57] 2025-05-28 00:10:35,954 | INFO     | mean y: 2315403.0921658985
[2025-05-28 02:10:57] 2025-05-28 00:10:35,954 | INFO     | -- intersect: -10383041019.859888
[2025-05-28 02:10:57] 2025-05-28 00:10:35,954 | INFO     | intersect: -10383041019.859888
[2025-05-28 02:10:57] 2025-05-28 00:10:35,955 | INFO     | chi2: 1.5486002035275235
[2025-05-28 02:10:57] 2025-05-28 00:10:35,955 | INFO     | current chi2=1.5486002035275235 (change=-0.05518198251605064 %)
[2025-05-28 02:10:57] 2025-05-28 00:10:35,955 | INFO     | right removable region: 216
[2025-05-28 02:10:57] 2025-05-28 00:10:35,955 | INFO     | sum of square deviations: 3168461268.0
[2025-05-28 02:10:57] 2025-05-28 00:10:35,957 | INFO     | sum of deviations: -14398497827.999994
[2025-05-28 02:10:57] 2025-05-28 00:10:35,957 | INFO     | mean x: 1748384399.0
[2025-05-28 02:10:57] 2025-05-28 00:10:35,957 | INFO     | mean y: 2338492.055299539
[2025-05-28 02:10:57] 2025-05-28 00:10:35,957 | INFO     | -- intersect: 7947554431.968306
[2025-05-28 02:10:57] 2025-05-28 00:10:35,957 | INFO     | intersect: 7947554431.968306
[2025-05-28 02:10:57] 2025-05-28 00:10:35,958 | INFO     | chi2: 0.018528562037172996
[2025-05-28 02:10:57] 2025-05-28 00:10:35,958 | INFO     | current chi2=0.018528562037172996 (change=98.80286813712101 %)
[2025-05-28 02:10:57] 2025-05-28 00:10:35,958 | INFO     | sum of square deviations: 2954447953.0
[2025-05-28 02:10:57] 2025-05-28 00:10:35,960 | INFO     | sum of deviations: -12904569946.999998
[2025-05-28 02:10:57] 2025-05-28 00:10:35,960 | INFO     | mean x: 1748384551.5
[2025-05-28 02:10:57] 2025-05-28 00:10:35,960 | INFO     | mean y: 2337418.6226415094
[2025-05-28 02:10:57] 2025-05-28 00:10:35,960 | INFO     | -- intersect: 7639009682.954106
[2025-05-28 02:10:57] 2025-05-28 00:10:35,960 | INFO     | intersect: 7639009682.954106
[2025-05-28 02:10:57] 2025-05-28 00:10:35,960 | INFO     | chi2: 0.01714113149078419
[2025-05-28 02:10:57] 2025-05-28 00:10:35,961 | INFO     | current chi2=0.01714113149078419 (change=7.4880637990431556 %)
[2025-05-28 02:10:57] 2025-05-28 00:10:35,961 | INFO     | left removable region: 20
[2025-05-28 02:10:57] 2025-05-28 00:10:35,961 | INFO     | sum of square deviations: 2334722845.0
[2025-05-28 02:10:57] 2025-05-28 00:10:35,962 | INFO     | sum of deviations: -8149377563.500001
[2025-05-28 02:10:57] 2025-05-28 00:10:35,962 | INFO     | mean x: 1748384673.5
[2025-05-28 02:10:57] 2025-05-28 00:10:35,962 | INFO     | mean y: 2333969.198979592
[2025-05-28 02:10:57] 2025-05-28 00:10:35,962 | INFO     | -- intersect: 6105091245.550629
[2025-05-28 02:10:57] 2025-05-28 00:10:35,962 | INFO     | intersect: 6105091245.550629
[2025-05-28 02:10:57] 2025-05-28 00:10:35,963 | INFO     | chi2: 0.012255597027934778
[2025-05-28 02:10:57] 2025-05-28 00:10:35,963 | INFO     | -- intersect: 6105091245.550629
[2025-05-28 02:10:57] 2025-05-28 00:10:35,963 | INFO     | current memory leak: -3.49 B/s (using 196 data points, chi2=0.01)
[2025-05-28 02:10:57] 2025-05-28 00:10:35,963 | INFO     | ..............................
[2025-05-28 02:10:57] 2025-05-28 00:10:35,963 | INFO     | . Timing measurements:
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | . get job = 0 s
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | . initial setup = 1 s
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | . payload setup = 11 s
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | . stage-in = 0 s
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | . payload execution = 13523 s
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | . stage-out = 1 s
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | . log creation = 0 s
[2025-05-28 02:10:57] 2025-05-28 00:10:35,964 | INFO     | ..............................
[2025-05-28 02:10:57] 2025-05-28 00:10:36,254 | INFO     | 
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | job summary report
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | --------------------------------------------------
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | PanDA job id: 6665737765
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | task id: 44871837
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | errors: (none)
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | pilot state: finished 
[2025-05-28 02:10:57] 2025-05-28 00:10:36,255 | INFO     | transexitcode: 0
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | exeerrorcode: 0
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | exeerrordiag: 
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | exitcode: 0
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | exitmsg: OK
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | cpuconsumptiontime: 51110 s
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | nevents: 400
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | neventsw: 0
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | pid: 2193981
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | pgrp: 2193981
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | corecount: 4
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | event service: False
[2025-05-28 02:10:57] 2025-05-28 00:10:36,256 | INFO     | sizes: {0: 2405074, 1: 2405273, 8: 2405479, 12: 2405507, 13538: 2436210, 13539: 2436209, 13540: 2445412, 13550: 2445526}
[2025-05-28 02:10:57] 2025-05-28 00:10:36,257 | INFO     | --------------------------------------------------
[2025-05-28 02:10:57] 2025-05-28 00:10:36,257 | INFO     | 
[2025-05-28 02:10:57] 2025-05-28 00:10:36,257 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-05-28 02:10:57] 2025-05-28 00:10:36,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 02:10:57] 2025-05-28 00:10:36,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 02:10:57] 2025-05-28 00:10:36,294 | INFO     | job 6665737765 has completed (purged errors)
[2025-05-28 02:10:57] 2025-05-28 00:10:36,294 | INFO     | overall cleanup function is called
[2025-05-28 02:10:57] 2025-05-28 00:10:37,303 | INFO     | --- collectZombieJob: --- 10, [2193981]
[2025-05-28 02:10:57] 2025-05-28 00:10:37,304 | INFO     | zombie collector waiting for pid 2193981
[2025-05-28 02:10:57] 2025-05-28 00:10:37,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 02:10:57] 2025-05-28 00:10:37,304 | INFO     | collected zombie processes
[2025-05-28 02:10:57] 2025-05-28 00:10:37,304 | INFO     | will attempt to kill all subprocesses of pid=2193981
[2025-05-28 02:10:57] 2025-05-28 00:10:38,060 | INFO     | process IDs to be killed: [2193981] (in reverse order)
[2025-05-28 02:10:57] 2025-05-28 00:10:38,375 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 02:10:57] 2025-05-28 00:10:38,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 02:10:57] 2025-05-28 00:10:38,402 | INFO     | did not find any defunct processes belonging to 2193981
[2025-05-28 02:10:57] 2025-05-28 00:10:38,424 | INFO     | did not find any defunct processes belonging to 2193981
[2025-05-28 02:10:57] 2025-05-28 00:10:38,424 | INFO     | ready for new job
[2025-05-28 02:10:57] 2025-05-28 00:10:38,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 02:10:57] 2025-05-28 00:10:38,427 | INFO     | **************************************
[2025-05-28 02:10:57] 2025-05-28 00:10:38,427 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 02:10:57] 2025-05-28 00:10:38,427 | INFO     | **************************************
[2025-05-28 02:10:57] 2025-05-28 00:10:38,427 | INFO     | 
[2025-05-28 02:10:57] 2025-05-28 00:10:38,435 | INFO     | architecture information:
[2025-05-28 02:10:57] 2025-05-28 00:10:38,435 | INFO     | executing command: cat /etc/os-release
[2025-05-28 02:10:57] 2025-05-28 00:10:38,463 | INFO     | cat /etc/os-release:
[2025-05-28 02:10:57] NAME="CentOS Linux"
[2025-05-28 02:10:57] VERSION="7 (Core)"
[2025-05-28 02:10:57] ID="centos"
[2025-05-28 02:10:57] ID_LIKE="rhel fedora"
[2025-05-28 02:10:57] VERSION_ID="7"
[2025-05-28 02:10:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 02:10:57] ANSI_COLOR="0;31"
[2025-05-28 02:10:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 02:10:57] HOME_URL="https://www.centos.org/"
[2025-05-28 02:10:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 02:10:57] 
[2025-05-28 02:10:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 02:10:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 02:10:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 02:10:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 02:10:57] 
[2025-05-28 02:10:57] 2025-05-28 00:10:38,464 | INFO     | **************************************
[2025-05-28 02:10:57] 2025-05-28 00:10:38,967 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-05-28 02:10:57] 2025-05-28 00:10:38,990 | INFO     | sufficient remaining disk space (3306983260160 B)
[2025-05-28 02:10:57] 2025-05-28 00:10:38,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 02:10:57] 2025-05-28 00:10:38,991 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 02:10:57] 2025-05-28 00:10:38,991 | INFO     | update_server=False
[2025-05-28 02:10:57] 2025-05-28 00:10:38,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 02:10:57] 2025-05-28 00:10:38,991 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 02:10:57] 2025-05-28 00:10:38,991 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 02:10:57] 2025-05-28 00:10:38,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 02:10:57] 2025-05-28 00:10:38,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 02:10:57] 2025-05-28 00:10:39,264 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 02:10:57] 2025-05-28 00:10:39,265 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 02:10:57] 2025-05-28 00:10:39,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 02:10:57] 2025-05-28 00:10:39,265 | INFO     | will abort loop
[2025-05-28 02:10:57] 2025-05-28 00:10:39,609 | INFO     | all data control threads have been joined
[2025-05-28 02:10:57] 2025-05-28 00:10:39,682 | INFO     | all job control threads have been joined
[2025-05-28 02:10:57] 2025-05-28 00:10:39,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 02:10:57] 2025-05-28 00:10:39,995 | INFO     | [job] retrieve thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:40,271 | INFO     | [job] job monitor thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:40,292 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:40,422 | INFO     | all payload control threads have been joined
[2025-05-28 02:10:57] 2025-05-28 00:10:40,614 | INFO     | [data] control thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:40,687 | INFO     | [job] control thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:40,800 | INFO     | [payload] validate_post thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:40,867 | INFO     | [data] copytool_in thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:40,869 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:41,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 02:10:57] 2025-05-28 00:10:41,109 | INFO     | [job] validate thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:41,427 | INFO     | [payload] control thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:41,470 | INFO     | [payload] failed_post thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:41,491 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:41,688 | INFO     | [data] copytool_out thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:41,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 02:10:57] 2025-05-28 00:10:42,086 | INFO     | [job] queue monitor thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:45,789 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:49,230 | INFO     | job.realtimelogging is not enabled
[2025-05-28 02:10:57] 2025-05-28 00:10:50,235 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 02:10:57] 2025-05-28 00:10:52,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22438112417600)>', '<ExcThread(monitor, started 22437878011648)>']
[2025-05-28 02:10:57] 2025-05-28 00:10:53,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 02:10:57] 2025-05-28 00:10:53,062 | INFO     | [monitor] control thread has ended
[2025-05-28 02:10:57] 2025-05-28 00:10:57,290 | INFO     | all workflow threads have been joined
[2025-05-28 02:10:57] 2025-05-28 00:10:57,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 02:10:57] 2025-05-28 00:10:57,291 | INFO     | traces error code: 0
[2025-05-28 02:10:57] 2025-05-28 00:10:57,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 02:10:57] 2025-05-28 00:10:57,416 [wrapper] ==== pilot stdout END ====
[2025-05-28 02:10:57] 2025-05-28 00:10:57,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 02:10:57] 2025-05-28 00:10:57,424 [wrapper] pilotpid: 2186158
[2025-05-28 02:10:57] 2025-05-28 00:10:57,429 [wrapper] Pilot exit status: 0
[2025-05-28 02:10:57] 2025-05-28 00:10:57,446 [wrapper] pandaids: 6665737765
[2025-05-28 02:10:57] 2025-05-28 00:10:57,590 [wrapper] cleanup supervisor_pilot 3474740 2186159
[2025-05-28 02:10:57] 2025-05-28 00:10:57,594 [wrapper] Test setup, not cleaning
[2025-05-28 02:10:57] 2025-05-28 00:10:57,598 [wrapper] apfmon messages muted
[2025-05-28 02:10:57] 2025-05-28 00:10:57,601 [wrapper] ==== wrapper stdout END ====
[2025-05-28 02:10:57] 2025-05-28 00:10:57,605 [wrapper] ==== wrapper stderr END ====
[2025-05-28 02:10:57]  *** Error codes and diagnostics ***
[2025-05-28 02:10:57]     "exeErrorCode": 0,
[2025-05-28 02:10:57]     "exeErrorDiag": "",
[2025-05-28 02:10:57]     "pilotErrorCode": 0,
[2025-05-28 02:10:57]     "pilotErrorDiag": "",
[2025-05-28 02:10:57]  *** Listing of results directory ***
[2025-05-28 02:10:57] total 418444
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc    495897 May 25 19:46 pilot3.tar.gz
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc      5111 May 25 20:10 queuedata.json
[2025-05-28 02:10:57] -rwx------ 1 boinc boinc     37140 May 25 20:11 runpilot2-wrapper.sh
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc       100 May 27 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 02:10:57] -rwxr-xr-x 1 boinc boinc      7986 May 27 22:24 run_atlas
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc       105 May 27 22:24 job.xml
[2025-05-28 02:10:57] -rw-r--r-- 2 boinc boinc 224108571 May 27 22:24 EVNT.44871834._001542.pool.root.1
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc      6677 May 27 22:24 init_data.xml
[2025-05-28 02:10:57] -rw-r--r-- 2 boinc boinc     15093 May 27 22:24 start_atlas.sh
[2025-05-28 02:10:57] drwxrwx--x 2 boinc boinc      4096 May 27 22:24 shared
[2025-05-28 02:10:57] -rw-r--r-- 2 boinc boinc    508877 May 27 22:24 input.tar.gz
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc         0 May 27 22:24 boinc_lockfile
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc      2559 May 27 22:24 pandaJob.out
[2025-05-28 02:10:57] -rw------- 1 boinc boinc    991111 May 27 22:24 agis_schedconf.cvmfs.json
[2025-05-28 02:10:57] drwx------ 4 boinc boinc      4096 May 27 22:24 pilot3
[2025-05-28 02:10:57] -rw------- 1 boinc boinc        95 May 28 02:09 pilot_heartbeat.json
[2025-05-28 02:10:57] -rw------- 1 boinc boinc 197457388 May 28 02:09 HITS.44871837._038652.pool.root.1
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc       531 May 28 02:10 boinc_task_state.xml
[2025-05-28 02:10:57] -rw------- 1 boinc boinc      1025 May 28 02:10 memory_monitor_summary.json
[2025-05-28 02:10:57] -rw------- 1 boinc boinc   1603667 May 28 02:10 agis_ddmendpoints.agis.ALL.json
[2025-05-28 02:10:57] -rw------- 1 boinc boinc    318520 May 28 02:10 log.44871837._038652.job.log.tgz.1
[2025-05-28 02:10:57] -rw------- 1 boinc boinc      7697 May 28 02:10 heartbeat.json
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc      8192 May 28 02:10 boinc_mmap_file
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc        28 May 28 02:10 wrapper_checkpoint.txt
[2025-05-28 02:10:57] -rw------- 1 boinc boinc      4745 May 28 02:10 pilotlog.txt
[2025-05-28 02:10:57] -rw------- 1 boinc boinc   1223422 May 28 02:10 log.44871837._038652.job.log.1
[2025-05-28 02:10:57] -rw------- 1 boinc boinc       357 May 28 02:10 output.list
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc       620 May 28 02:10 runtime_log
[2025-05-28 02:10:57] -rw------- 1 boinc boinc   1556480 May 28 02:10 result.tar.gz
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc      9026 May 28 02:10 runtime_log.err
[2025-05-28 02:10:57] -rw------- 1 boinc boinc       666 May 28 02:10 Vg0NDmwzUd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUoUKDmW8gUBo.diag
[2025-05-28 02:10:57] -rw-r--r-- 1 boinc boinc     20925 May 28 02:10 stderr.txt
[2025-05-28 02:10:57] HITS file was successfully produced:
[2025-05-28 02:10:57] -rw------- 1 boinc boinc 197457388 May 28 02:09 shared/HITS.pool.root.1
[2025-05-28 02:10:57]  *** Contents of shared directory: ***
[2025-05-28 02:10:57] total 413736
[2025-05-28 02:10:57] -rw-r--r-- 2 boinc boinc 224108571 May 27 22:24 ATLAS.root_0
[2025-05-28 02:10:57] -rw-r--r-- 2 boinc boinc     15093 May 27 22:24 start_atlas.sh
[2025-05-28 02:10:57] -rw-r--r-- 2 boinc boinc    508877 May 27 22:24 input.tar.gz
[2025-05-28 02:10:57] -rw------- 1 boinc boinc 197457388 May 28 02:09 HITS.pool.root.1
[2025-05-28 02:10:57] -rw------- 1 boinc boinc   1556480 May 28 02:10 result.tar.gz
02:10:59 (2182229): run_atlas exited; CPU time 51857.433199
02:10:59 (2182229): called boinc_finish(0)

</stderr_txt>
]]>

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