Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:43:06 (2642532): wrapper (7.7.26015): starting
22:43:06 (2642532): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 22:43:06] Arguments: --nthreads 8
[2025-05-25 22:43:06] Threads: 8
[2025-05-25 22:43:06] Checking for CVMFS
[2025-05-25 22:43:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 22:43:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 22:43:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 22:43:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 22:43:07] 2.12.6.0 4103777 9759 316832 146422 2 629 16980201 32503808 27286 16776704 0 73458229 99.557 82633652 21631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 22:43:07] CVMFS is ok
[2025-05-25 22:43:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 22:43:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 22:43:07] Further information can be found at the LHC@home message board.
[2025-05-25 22:43:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 22:43:07] Checking for apptainer binary...
[2025-05-25 22:43:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 22:43:07] Running /usr/bin/apptainer --version
[2025-05-25 22:43:07] apptainer version 1.4.1-1.el9
[2025-05-25 22:43:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 22:43:08] c7-7-36.aglt2.org
[2025-05-25 22:43:08] apptainer works
[2025-05-25 22:43:08] Set ATHENA_PROC_NUMBER=8
[2025-05-25 22:43:08] Set ATHENA_CORE_NUMBER=8
[2025-05-25 22:43:08] Starting ATLAS job with PandaID=6665743593
[2025-05-25 22:43:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 01:26:04]  *** The last 200 lines of the pilot log: ***
[2025-05-26 01:26:04] 2025-05-26 05:25:36,819 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 01:26:04] 2025-05-26 05:25:38,841 | INFO     | monitor loop #645: job 0:6665743593 is in state 'finished'
[2025-05-26 01:26:04] 2025-05-26 05:25:38,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 01:26:04] 2025-05-26 05:25:39,910 | INFO     | PID=2647628 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-26 01:26:04] 2025-05-26 05:25:39,911 | INFO     | .. there are 30 such processes running
[2025-05-26 01:26:04] 2025-05-26 05:25:41,347 | INFO     | monitor loop #646: job 0:6665743593 is in state 'finished'
[2025-05-26 01:26:04] 2025-05-26 05:25:41,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,850 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-26 01:26:04] 2025-05-26 05:25:42,851 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6665743593/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,853 | INFO     | extracted standard info from prmon json
[2025-05-26 01:26:04] 2025-05-26 05:25:42,853 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 01:26:04] 2025-05-26 05:25:42,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 01:26:04] 2025-05-26 05:25:42,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 01:26:04] 2025-05-26 05:25:42,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 01:26:04] 2025-05-26 05:25:42,856 | INFO     | fitting pss+swap vs Time
[2025-05-26 01:26:04] 2025-05-26 05:25:42,856 | INFO     | sum of square deviations: 1246419355.3710754
[2025-05-26 01:26:04] 2025-05-26 05:25:42,857 | INFO     | sum of deviations: 29739319330.698128
[2025-05-26 01:26:04] 2025-05-26 05:25:42,857 | INFO     | mean x: 1748232258.0628932
[2025-05-26 01:26:04] 2025-05-26 05:25:42,857 | INFO     | mean y: 2194988.830188679
[2025-05-26 01:26:04] 2025-05-26 05:25:42,857 | INFO     | -- intersect: -41710280962.95842
[2025-05-26 01:26:04] 2025-05-26 05:25:42,857 | INFO     | intersect: -41710280962.95842
[2025-05-26 01:26:04] 2025-05-26 05:25:42,858 | INFO     | chi2: 1.950896176690606
[2025-05-26 01:26:04] 2025-05-26 05:25:42,858 | INFO     | sum of square deviations: 1132494687.8506494
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | sum of deviations: 30213893763.662357
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | mean x: 1748232105.564935
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | mean y: 2195588.2337662335
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | -- intersect: -46638993706.88865
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | intersect: -46638993706.88865
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | chi2: 1.9410461635008713
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | current chi2=1.9410461635008713 (change=0.5048968421499396 %)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,859 | INFO     | right removable region: 153
[2025-05-26 01:26:04] 2025-05-26 05:25:42,860 | INFO     | sum of square deviations: 1132488587.8506494
[2025-05-26 01:26:04] 2025-05-26 05:25:42,860 | INFO     | sum of deviations: 835575159.5584404
[2025-05-26 01:26:04] 2025-05-26 05:25:42,861 | INFO     | mean x: 1748232410.564935
[2025-05-26 01:26:04] 2025-05-26 05:25:42,861 | INFO     | mean y: 2233361.8441558443
[2025-05-26 01:26:04] 2025-05-26 05:25:42,861 | INFO     | -- intersect: -1287651226.0221527
[2025-05-26 01:26:04] 2025-05-26 05:25:42,861 | INFO     | intersect: -1287651226.0221527
[2025-05-26 01:26:04] 2025-05-26 05:25:42,861 | INFO     | chi2: 0.04964907147541221
[2025-05-26 01:26:04] 2025-05-26 05:25:42,861 | INFO     | current chi2=0.04964907147541221 (change=97.45506336684538 %)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,861 | INFO     | sum of square deviations: 1025720745.3288614
[2025-05-26 01:26:04] 2025-05-26 05:25:42,862 | INFO     | sum of deviations: 297305172.9597316
[2025-05-26 01:26:04] 2025-05-26 05:25:42,862 | INFO     | mean x: 1748232563.067114
[2025-05-26 01:26:04] 2025-05-26 05:25:42,862 | INFO     | mean y: 2234088.6040268457
[2025-05-26 01:26:04] 2025-05-26 05:25:42,862 | INFO     | -- intersect: -504491145.2410397
[2025-05-26 01:26:04] 2025-05-26 05:25:42,862 | INFO     | intersect: -504491145.2410397
[2025-05-26 01:26:04] 2025-05-26 05:25:42,862 | INFO     | chi2: 0.040705436981239504
[2025-05-26 01:26:04] 2025-05-26 05:25:42,863 | INFO     | current chi2=0.040705436981239504 (change=18.01369940745393 %)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,863 | INFO     | left removable region: 20
[2025-05-26 01:26:04] 2025-05-26 05:25:42,863 | INFO     | sum of square deviations: 729496937.248119
[2025-05-26 01:26:04] 2025-05-26 05:25:42,863 | INFO     | sum of deviations: 1377352316.5939848
[2025-05-26 01:26:04] 2025-05-26 05:25:42,863 | INFO     | mean x: 1748232685.075188
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | mean y: 2237194.2406015038
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | -- intersect: -3298574935.0290217
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | intersect: -3298574935.0290217
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | chi2: 0.028553007772261555
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | -- intersect: -3298574935.0290217
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | current memory leak: 1.89 B/s (using 133 data points, chi2=0.03)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | ..............................
[2025-05-26 01:26:04] 2025-05-26 05:25:42,864 | INFO     | . Timing measurements:
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | . get job = 0 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | . initial setup = 3 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | . payload setup = 10 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | . stage-in = 0 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | . payload execution = 9695 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | . stage-out = 1 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | . log creation = 0 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,865 | INFO     | ..............................
[2025-05-26 01:26:04] 2025-05-26 05:25:42,946 | INFO     | 
[2025-05-26 01:26:04] 2025-05-26 05:25:42,948 | INFO     | job summary report
[2025-05-26 01:26:04] 2025-05-26 05:25:42,948 | INFO     | --------------------------------------------------
[2025-05-26 01:26:04] 2025-05-26 05:25:42,948 | INFO     | PanDA job id: 6665743593
[2025-05-26 01:26:04] 2025-05-26 05:25:42,948 | INFO     | task id: 44871837
[2025-05-26 01:26:04] 2025-05-26 05:25:42,948 | INFO     | errors: (none)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | pilot state: finished 
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | transexitcode: 0
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | exeerrorcode: 0
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | exeerrordiag: 
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | exitcode: 0
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | exitmsg: OK
[2025-05-26 01:26:04] 2025-05-26 05:25:42,949 | INFO     | cpuconsumptiontime: 40744 s
[2025-05-26 01:26:04] 2025-05-26 05:25:42,950 | INFO     | nevents: 400
[2025-05-26 01:26:04] 2025-05-26 05:25:42,950 | INFO     | neventsw: 0
[2025-05-26 01:26:04] 2025-05-26 05:25:42,950 | INFO     | pid: 2666818
[2025-05-26 01:26:04] 2025-05-26 05:25:42,950 | INFO     | pgrp: 2666818
[2025-05-26 01:26:04] 2025-05-26 05:25:42,951 | INFO     | corecount: 8
[2025-05-26 01:26:04] 2025-05-26 05:25:42,951 | INFO     | event service: False
[2025-05-26 01:26:04] 2025-05-26 05:25:42,951 | INFO     | sizes: {0: 2393740, 7: 2393946, 11: 2393974, 9709: 2422298, 9711: 2431239, 9715: 2431295, 9721: 2431593}
[2025-05-26 01:26:04] 2025-05-26 05:25:42,951 | INFO     | --------------------------------------------------
[2025-05-26 01:26:04] 2025-05-26 05:25:42,951 | INFO     | 
[2025-05-26 01:26:04] 2025-05-26 05:25:42,951 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 01:26:04] 2025-05-26 05:25:42,973 | INFO     | job 6665743593 has completed (purged errors)
[2025-05-26 01:26:04] 2025-05-26 05:25:42,973 | INFO     | overall cleanup function is called
[2025-05-26 01:26:04] 2025-05-26 05:25:43,981 | INFO     | --- collectZombieJob: --- 10, [2666818]
[2025-05-26 01:26:04] 2025-05-26 05:25:43,981 | INFO     | zombie collector waiting for pid 2666818
[2025-05-26 01:26:04] 2025-05-26 05:25:43,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 01:26:04] 2025-05-26 05:25:43,981 | INFO     | collected zombie processes
[2025-05-26 01:26:04] 2025-05-26 05:25:43,982 | INFO     | will attempt to kill all subprocesses of pid=2666818
[2025-05-26 01:26:04] 2025-05-26 05:25:44,462 | INFO     | process IDs to be killed: [2666818] (in reverse order)
[2025-05-26 01:26:04] 2025-05-26 05:25:44,615 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 01:26:04] 2025-05-26 05:25:44,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 01:26:04] 2025-05-26 05:25:44,634 | INFO     | did not find any defunct processes belonging to 2666818
[2025-05-26 01:26:04] 2025-05-26 05:25:44,653 | INFO     | did not find any defunct processes belonging to 2666818
[2025-05-26 01:26:04] 2025-05-26 05:25:44,653 | INFO     | ready for new job
[2025-05-26 01:26:04] 2025-05-26 05:25:44,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 01:26:04] 2025-05-26 05:25:44,655 | INFO     | **************************************
[2025-05-26 01:26:04] 2025-05-26 05:25:44,655 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 01:26:04] 2025-05-26 05:25:44,655 | INFO     | **************************************
[2025-05-26 01:26:04] 2025-05-26 05:25:44,655 | INFO     | 
[2025-05-26 01:26:04] 2025-05-26 05:25:44,673 | INFO     | architecture information:
[2025-05-26 01:26:04] 2025-05-26 05:25:44,673 | INFO     | executing command: cat /etc/os-release
[2025-05-26 01:26:04] 2025-05-26 05:25:44,689 | INFO     | cat /etc/os-release:
[2025-05-26 01:26:04] NAME="CentOS Linux"
[2025-05-26 01:26:04] VERSION="7 (Core)"
[2025-05-26 01:26:04] ID="centos"
[2025-05-26 01:26:04] ID_LIKE="rhel fedora"
[2025-05-26 01:26:04] VERSION_ID="7"
[2025-05-26 01:26:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 01:26:04] ANSI_COLOR="0;31"
[2025-05-26 01:26:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 01:26:04] HOME_URL="https://www.centos.org/"
[2025-05-26 01:26:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 01:26:04] 
[2025-05-26 01:26:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 01:26:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 01:26:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 01:26:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 01:26:04] 
[2025-05-26 01:26:04] 2025-05-26 05:25:44,689 | INFO     | **************************************
[2025-05-26 01:26:04] 2025-05-26 05:25:45,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-26 01:26:04] 2025-05-26 05:25:45,214 | INFO     | sufficient remaining disk space (93858037760 B)
[2025-05-26 01:26:04] 2025-05-26 05:25:45,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 01:26:04] 2025-05-26 05:25:45,215 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 01:26:04] 2025-05-26 05:25:45,215 | INFO     | update_server=False
[2025-05-26 01:26:04] 2025-05-26 05:25:45,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 01:26:04] 2025-05-26 05:25:45,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 01:26:04] 2025-05-26 05:25:45,215 | INFO     | aborting loop
[2025-05-26 01:26:04] 2025-05-26 05:25:45,372 | INFO     | all data control threads have been joined
[2025-05-26 01:26:04] 2025-05-26 05:25:45,639 | INFO     | all job control threads have been joined
[2025-05-26 01:26:04] 2025-05-26 05:25:45,941 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 01:26:04] 2025-05-26 05:25:45,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 01:26:04] 2025-05-26 05:25:45,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 01:26:04] 2025-05-26 05:25:46,186 | INFO     | all payload control threads have been joined
[2025-05-26 01:26:04] 2025-05-26 05:25:46,221 | INFO     | [job] retrieve thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:46,221 | INFO     | [job] job monitor thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:46,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 01:26:04] 2025-05-26 05:25:46,394 | INFO     | [data] control thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:46,495 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:46,512 | INFO     | [payload] validate_post thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:46,650 | INFO     | [job] control thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:46,959 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:47,193 | INFO     | [payload] control thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:47,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 01:26:04] 2025-05-26 05:25:47,431 | INFO     | [payload] failed_post thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:47,651 | INFO     | [job] validate thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:47,712 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:47,716 | INFO     | [data] copytool_in thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:47,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 01:26:04] 2025-05-26 05:25:48,312 | INFO     | [data] copytool_out thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:48,972 | INFO     | [job] queue monitor thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:51,231 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:56,164 | INFO     | job.realtimelogging is not enabled
[2025-05-26 01:26:04] 2025-05-26 05:25:57,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 01:26:04] 2025-05-26 05:25:58,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293122508608)>', '<ExcThread(monitor, started 140292455905024)>']
[2025-05-26 01:26:04] 2025-05-26 05:25:59,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 01:26:04] 2025-05-26 05:25:59,006 | INFO     | [monitor] control thread has ended
[2025-05-26 01:26:04] 2025-05-26 05:26:03,835 | INFO     | all workflow threads have been joined
[2025-05-26 01:26:04] 2025-05-26 05:26:03,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 01:26:04] 2025-05-26 05:26:03,838 | INFO     | traces error code: 0
[2025-05-26 01:26:04] 2025-05-26 05:26:03,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 01:26:04] 2025-05-26 05:26:04,260 [wrapper] ==== pilot stdout END ====
[2025-05-26 01:26:04] 2025-05-26 05:26:04,262 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 01:26:04] 2025-05-26 05:26:04,266 [wrapper] pilotpid: 2647628
[2025-05-26 01:26:04] 2025-05-26 05:26:04,268 [wrapper] Pilot exit status: 0
[2025-05-26 01:26:04] 2025-05-26 05:26:04,281 [wrapper] pandaids: 6665743593
[2025-05-26 01:26:04] 2025-05-26 05:26:04,394 [wrapper] cleanup supervisor_pilot 3920583 2647629
[2025-05-26 01:26:04] 2025-05-26 05:26:04,401 [wrapper] Test setup, not cleaning
[2025-05-26 01:26:04] 2025-05-26 05:26:04,417 [wrapper] apfmon messages muted
[2025-05-26 01:26:04] 2025-05-26 05:26:04,430 [wrapper] ==== wrapper stdout END ====
[2025-05-26 01:26:04] 2025-05-26 05:26:04,434 [wrapper] ==== wrapper stderr END ====
[2025-05-26 01:26:04]  *** Error codes and diagnostics ***
[2025-05-26 01:26:04]     "exeErrorCode": 0,
[2025-05-26 01:26:04]     "exeErrorDiag": "",
[2025-05-26 01:26:04]     "pilotErrorCode": 0,
[2025-05-26 01:26:04]     "pilotErrorDiag": "",
[2025-05-26 01:26:04]  *** Listing of results directory ***
[2025-05-26 01:26:04] total 419380
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas    495897 May 25 15:50 pilot3.tar.gz
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas      5111 May 25 16:40 queuedata.json
[2025-05-26 01:26:04] -rwx------. 1 boincer umatlas     37140 May 25 16:41 runpilot2-wrapper.sh
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas       100 May 25 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 01:26:04] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 22:43 run_atlas
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas       105 May 25 22:43 job.xml
[2025-05-26 01:26:04] -rw-r--r--. 2 boincer umatlas 221950086 May 25 22:43 EVNT.44871834._001612.pool.root.1
[2025-05-26 01:26:04] -rw-r--r--. 2 boincer umatlas    508880 May 25 22:43 input.tar.gz
[2025-05-26 01:26:04] -rw-r--r--. 2 boincer umatlas     15093 May 25 22:43 start_atlas.sh
[2025-05-26 01:26:04] drwxrwx--x. 2 boincer umatlas      4096 May 25 22:43 shared
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas         0 May 25 22:43 boinc_lockfile
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas      2558 May 25 22:43 pandaJob.out
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas    990811 May 25 22:43 agis_schedconf.cvmfs.json
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas   1596740 May 25 22:43 agis_ddmendpoints.agis.ALL.json
[2025-05-26 01:26:04] drwx------. 4 boincer umatlas      4096 May 25 22:43 pilot3
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas      6934 May 26 01:22 init_data.xml
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas 201207156 May 26 01:24 HITS.44871837._040423.pool.root.1
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas       530 May 26 01:24 boinc_task_state.xml
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas        95 May 26 01:25 pilot_heartbeat.json
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas      1034 May 26 01:25 memory_monitor_summary.json
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas    364928 May 26 01:25 log.44871837._040423.job.log.tgz.1
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas      7686 May 26 01:25 heartbeat.json
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas        27 May 26 01:26 wrapper_checkpoint.txt
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas      8192 May 26 01:26 boinc_mmap_file
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas      4425 May 26 01:26 pilotlog.txt
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas    863347 May 26 01:26 log.44871837._040423.job.log.1
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas       357 May 26 01:26 output.list
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas       620 May 26 01:26 runtime_log
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas   1249280 May 26 01:26 result.tar.gz
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas       654 May 26 01:26 TELLDmpKXd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd7UKDmDC2Uun.diag
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas      8654 May 26 01:26 runtime_log.err
[2025-05-26 01:26:04] -rw-r--r--. 1 boincer umatlas     21290 May 26 01:26 stderr.txt
[2025-05-26 01:26:04] HITS file was successfully produced:
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas 201207156 May 26 01:24 shared/HITS.pool.root.1
[2025-05-26 01:26:04]  *** Contents of shared directory: ***
[2025-05-26 01:26:04] total 414984
[2025-05-26 01:26:04] -rw-r--r--. 2 boincer umatlas 221950086 May 25 22:43 ATLAS.root_0
[2025-05-26 01:26:04] -rw-r--r--. 2 boincer umatlas    508880 May 25 22:43 input.tar.gz
[2025-05-26 01:26:04] -rw-r--r--. 2 boincer umatlas     15093 May 25 22:43 start_atlas.sh
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas 201207156 May 26 01:24 HITS.pool.root.1
[2025-05-26 01:26:04] -rw-------. 1 boincer umatlas   1249280 May 26 01:26 result.tar.gz
01:26:06 (2642532): run_atlas exited; CPU time 41113.766846
01:26:06 (2642532): called boinc_finish(0)

</stderr_txt>
]]>

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