Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:17:51 (3096223): wrapper (7.7.26015): starting
05:17:51 (3096223): wrapper: running run_atlas (--nthreads 12)
[2025-05-26 05:17:51] Arguments: --nthreads 12
[2025-05-26 05:17:51] Threads: 12
[2025-05-26 05:17:51] Checking for CVMFS
[2025-05-26 05:17:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 05:17:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 05:17:53] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 05:17:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 05:17:55] 2.12.7.0 39975 2735 171988 146426 0 134 3304690 4096001 16476 130560 0 28262325 99.999 826041 676 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-26 05:17:55] CVMFS is ok
[2025-05-26 05:17:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 05:17:55] Checking for apptainer binary...
[2025-05-26 05:17:55] apptainer is not installed, using version from CVMFS
[2025-05-26 05:17:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 05:17:57] epyc7v12
[2025-05-26 05:17:57] apptainer works
[2025-05-26 05:17:57] Set ATHENA_PROC_NUMBER=12
[2025-05-26 05:17:57] Set ATHENA_CORE_NUMBER=12
[2025-05-26 05:17:58] Starting ATLAS job with PandaID=6665735266
[2025-05-26 05:17:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 07:52:27]  *** The last 200 lines of the pilot log: ***
[2025-05-26 07:52:27] 2025-05-26 07:52:08,254 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 07:52:27] 2025-05-26 07:52:08,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 07:52:27] 2025-05-26 07:52:08,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 07:52:27] 2025-05-26 07:52:08,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 07:52:27] 2025-05-26 07:52:08,258 | INFO     | fitting pss+swap vs Time
[2025-05-26 07:52:27] 2025-05-26 07:52:08,258 | INFO     | sum of square deviations: 965001738.0616443
[2025-05-26 07:52:27] 2025-05-26 07:52:08,259 | INFO     | sum of deviations: 58029791861.143814
[2025-05-26 07:52:27] 2025-05-26 07:52:08,259 | INFO     | mean x: 1748241433.5547945
[2025-05-26 07:52:27] 2025-05-26 07:52:08,259 | INFO     | mean y: 2543766.294520548
[2025-05-26 07:52:27] 2025-05-26 07:52:08,260 | INFO     | -- intersect: -105126890213.78374
[2025-05-26 07:52:27] 2025-05-26 07:52:08,260 | INFO     | intersect: -105126890213.78374
[2025-05-26 07:52:27] 2025-05-26 07:52:08,260 | INFO     | chi2: 5.8137734319031225
[2025-05-26 07:52:27] 2025-05-26 07:52:08,260 | INFO     | sum of square deviations: 869216335.5461007
[2025-05-26 07:52:27] 2025-05-26 07:52:08,265 | INFO     | sum of deviations: 66154115362.390045
[2025-05-26 07:52:27] 2025-05-26 07:52:08,265 | INFO     | mean x: 1748241281.0567377
[2025-05-26 07:52:27] 2025-05-26 07:52:08,266 | INFO     | mean y: 2556243.3262411347
[2025-05-26 07:52:27] 2025-05-26 07:52:08,266 | INFO     | -- intersect: -133052185894.78452
[2025-05-26 07:52:27] 2025-05-26 07:52:08,266 | INFO     | intersect: -133052185894.78452
[2025-05-26 07:52:27] 2025-05-26 07:52:08,266 | INFO     | chi2: 5.064835544611454
[2025-05-26 07:52:27] 2025-05-26 07:52:08,266 | INFO     | current chi2=5.064835544611454 (change=12.8821306173004 %)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,266 | INFO     | right removable region: 140
[2025-05-26 07:52:27] 2025-05-26 07:52:08,267 | INFO     | sum of square deviations: 869211455.5461007
[2025-05-26 07:52:27] 2025-05-26 07:52:08,267 | INFO     | sum of deviations: 8201336858.985819
[2025-05-26 07:52:27] 2025-05-26 07:52:08,268 | INFO     | mean x: 1748241586.0567377
[2025-05-26 07:52:27] 2025-05-26 07:52:08,268 | INFO     | mean y: 2622925.7517730496
[2025-05-26 07:52:27] 2025-05-26 07:52:08,268 | INFO     | -- intersect: -16492693681.794369
[2025-05-26 07:52:27] 2025-05-26 07:52:08,268 | INFO     | intersect: -16492693681.794369
[2025-05-26 07:52:27] 2025-05-26 07:52:08,268 | INFO     | chi2: 1.4819653160337107
[2025-05-26 07:52:27] 2025-05-26 07:52:08,268 | INFO     | current chi2=1.4819653160337107 (change=74.5094071278833 %)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,273 | INFO     | sum of square deviations: 779979435.5294125
[2025-05-26 07:52:27] 2025-05-26 07:52:08,274 | INFO     | sum of deviations: -9215023918.735292
[2025-05-26 07:52:27] 2025-05-26 07:52:08,274 | INFO     | mean x: 1748241738.5588236
[2025-05-26 07:52:27] 2025-05-26 07:52:08,274 | INFO     | mean y: 2652439.154411765
[2025-05-26 07:52:27] 2025-05-26 07:52:08,274 | INFO     | -- intersect: 20657157805.20445
[2025-05-26 07:52:27] 2025-05-26 07:52:08,274 | INFO     | intersect: 20657157805.20445
[2025-05-26 07:52:27] 2025-05-26 07:52:08,274 | INFO     | chi2: 0.8923643549293679
[2025-05-26 07:52:27] 2025-05-26 07:52:08,275 | INFO     | current chi2=0.8923643549293679 (change=39.78507153475992 %)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,275 | INFO     | sum of square deviations: 697073115.5114506
[2025-05-26 07:52:27] 2025-05-26 07:52:08,276 | INFO     | sum of deviations: -13058072379.53435
[2025-05-26 07:52:27] 2025-05-26 07:52:08,276 | INFO     | mean x: 1748241891.0610688
[2025-05-26 07:52:27] 2025-05-26 07:52:08,276 | INFO     | mean y: 2659369.816793893
[2025-05-26 07:52:27] 2025-05-26 07:52:08,276 | INFO     | -- intersect: 32751977400.336132
[2025-05-26 07:52:27] 2025-05-26 07:52:08,276 | INFO     | intersect: 32751977400.336132
[2025-05-26 07:52:27] 2025-05-26 07:52:08,276 | INFO     | chi2: 0.8335649699484
[2025-05-26 07:52:27] 2025-05-26 07:52:08,276 | INFO     | current chi2=0.8335649699484 (change=6.589167827711136 %)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,281 | INFO     | left removable region: 30
[2025-05-26 07:52:27] 2025-05-26 07:52:08,281 | INFO     | sum of square deviations: 412700600.91818273
[2025-05-26 07:52:27] 2025-05-26 07:52:08,282 | INFO     | sum of deviations: -3244185332.427273
[2025-05-26 07:52:27] 2025-05-26 07:52:08,282 | INFO     | mean x: 1748242165.5727272
[2025-05-26 07:52:27] 2025-05-26 07:52:08,282 | INFO     | mean y: 2677610.9909090907
[2025-05-26 07:52:27] 2025-05-26 07:52:08,282 | INFO     | -- intersect: 13745380137.86783
[2025-05-26 07:52:27] 2025-05-26 07:52:08,282 | INFO     | intersect: 13745380137.86783
[2025-05-26 07:52:27] 2025-05-26 07:52:08,282 | INFO     | chi2: 0.003092448999824915
[2025-05-26 07:52:27] 2025-05-26 07:52:08,282 | INFO     | -- intersect: 13745380137.86783
[2025-05-26 07:52:27] 2025-05-26 07:52:08,283 | INFO     | current memory leak: -7.86 B/s (using 110 data points, chi2=0.00)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,283 | INFO     | ..............................
[2025-05-26 07:52:27] 2025-05-26 07:52:08,283 | INFO     | . Timing measurements:
[2025-05-26 07:52:27] 2025-05-26 07:52:08,283 | INFO     | . get job = 0 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,283 | INFO     | . initial setup = 5 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,284 | INFO     | . payload setup = 80 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,284 | INFO     | . stage-in = 0 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,284 | INFO     | . payload execution = 8904 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,284 | INFO     | . stage-out = 2 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,284 | INFO     | . log creation = 0 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,284 | INFO     | ..............................
[2025-05-26 07:52:27] 2025-05-26 07:52:08,490 | INFO     | 
[2025-05-26 07:52:27] 2025-05-26 07:52:08,490 | INFO     | job summary report
[2025-05-26 07:52:27] 2025-05-26 07:52:08,490 | INFO     | --------------------------------------------------
[2025-05-26 07:52:27] 2025-05-26 07:52:08,490 | INFO     | PanDA job id: 6665735266
[2025-05-26 07:52:27] 2025-05-26 07:52:08,490 | INFO     | task id: 44871837
[2025-05-26 07:52:27] 2025-05-26 07:52:08,490 | INFO     | errors: (none)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | pilot state: finished 
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | transexitcode: 0
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | exeerrorcode: 0
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | exeerrordiag: 
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | exitcode: 0
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | exitmsg: OK
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | cpuconsumptiontime: 58959 s
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | nevents: 400
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | neventsw: 0
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | pid: 3127242
[2025-05-26 07:52:27] 2025-05-26 07:52:08,491 | INFO     | pgrp: 3127242
[2025-05-26 07:52:27] 2025-05-26 07:52:08,492 | INFO     | corecount: 12
[2025-05-26 07:52:27] 2025-05-26 07:52:08,492 | INFO     | event service: False
[2025-05-26 07:52:27] 2025-05-26 07:52:08,492 | INFO     | sizes: {0: 2393537, 1: 2393621, 2: 2393820, 13: 2393820, 24: 2393876, 35: 2393904, 46: 2394060, 54: 2394294, 56: 2394322, 8989: 2422473, 8993: 2431796, 9047: 24319
[2025-05-26 07:52:27] 2025-05-26 07:52:08,492 | INFO     | --------------------------------------------------
[2025-05-26 07:52:27] 2025-05-26 07:52:08,492 | INFO     | 
[2025-05-26 07:52:27] 2025-05-26 07:52:08,492 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-05-26 07:52:27] 2025-05-26 07:52:08,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,669 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,669 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,669 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 07:52:27] 2025-05-26 07:52:08,671 | INFO     | job 6665735266 has completed (purged errors)
[2025-05-26 07:52:27] 2025-05-26 07:52:08,671 | INFO     | overall cleanup function is called
[2025-05-26 07:52:27] 2025-05-26 07:52:09,685 | INFO     | --- collectZombieJob: --- 10, [3127242]
[2025-05-26 07:52:27] 2025-05-26 07:52:09,685 | INFO     | zombie collector waiting for pid 3127242
[2025-05-26 07:52:27] 2025-05-26 07:52:09,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 07:52:27] 2025-05-26 07:52:09,685 | INFO     | collected zombie processes
[2025-05-26 07:52:27] 2025-05-26 07:52:09,685 | INFO     | will attempt to kill all subprocesses of pid=3127242
[2025-05-26 07:52:27] 2025-05-26 07:52:10,938 | INFO     | process IDs to be killed: [3127242] (in reverse order)
[2025-05-26 07:52:27] 2025-05-26 07:52:13,460 | INFO     | PID=3103413 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-26 07:52:27] 2025-05-26 07:52:13,460 | INFO     | .. there are 20 such processes running
[2025-05-26 07:52:27] 2025-05-26 07:52:13,582 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 07:52:27] 2025-05-26 07:52:13,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 07:52:27] 2025-05-26 07:52:13,609 | INFO     | did not find any defunct processes belonging to 3127242
[2025-05-26 07:52:27] 2025-05-26 07:52:13,640 | INFO     | did not find any defunct processes belonging to 3127242
[2025-05-26 07:52:27] 2025-05-26 07:52:13,640 | INFO     | ready for new job
[2025-05-26 07:52:27] 2025-05-26 07:52:13,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 07:52:27] 2025-05-26 07:52:13,642 | INFO     | **************************************
[2025-05-26 07:52:27] 2025-05-26 07:52:13,642 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 07:52:27] 2025-05-26 07:52:13,645 | INFO     | **************************************
[2025-05-26 07:52:27] 2025-05-26 07:52:13,645 | INFO     | 
[2025-05-26 07:52:27] 2025-05-26 07:52:13,683 | INFO     | architecture information:
[2025-05-26 07:52:27] 2025-05-26 07:52:13,693 | INFO     | executing command: cat /etc/os-release
[2025-05-26 07:52:27] 2025-05-26 07:52:13,792 | INFO     | cat /etc/os-release:
[2025-05-26 07:52:27] NAME="CentOS Linux"
[2025-05-26 07:52:27] VERSION="7 (Core)"
[2025-05-26 07:52:27] ID="centos"
[2025-05-26 07:52:27] ID_LIKE="rhel fedora"
[2025-05-26 07:52:27] VERSION_ID="7"
[2025-05-26 07:52:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 07:52:27] ANSI_COLOR="0;31"
[2025-05-26 07:52:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 07:52:27] HOME_URL="https://www.centos.org/"
[2025-05-26 07:52:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 07:52:27] 
[2025-05-26 07:52:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 07:52:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 07:52:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 07:52:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 07:52:27] 
[2025-05-26 07:52:27] 2025-05-26 07:52:13,792 | INFO     | **************************************
[2025-05-26 07:52:27] 2025-05-26 07:52:14,293 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-05-26 07:52:27] 2025-05-26 07:52:14,397 | INFO     | sufficient remaining disk space (330242719744 B)
[2025-05-26 07:52:27] 2025-05-26 07:52:14,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 07:52:27] 2025-05-26 07:52:14,398 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 07:52:27] 2025-05-26 07:52:14,398 | INFO     | update_server=False
[2025-05-26 07:52:27] 2025-05-26 07:52:14,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 07:52:27] 2025-05-26 07:52:14,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 07:52:27] 2025-05-26 07:52:14,401 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 07:52:27] 2025-05-26 07:52:14,402 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 07:52:27] 2025-05-26 07:52:14,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 07:52:27] 2025-05-26 07:52:14,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 07:52:27] 2025-05-26 07:52:14,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 07:52:27] 2025-05-26 07:52:14,817 | INFO     | aborting loop
[2025-05-26 07:52:27] 2025-05-26 07:52:15,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 07:52:27] 2025-05-26 07:52:15,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 07:52:27] 2025-05-26 07:52:15,333 | INFO     | all data control threads have been joined
[2025-05-26 07:52:27] 2025-05-26 07:52:15,401 | INFO     | [job] retrieve thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:15,405 | INFO     | [job] queue monitor thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:15,465 | INFO     | all job control threads have been joined
[2025-05-26 07:52:27] 2025-05-26 07:52:15,493 | INFO     | all payload control threads have been joined
[2025-05-26 07:52:27] 2025-05-26 07:52:15,629 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:15,669 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:15,821 | INFO     | [job] job monitor thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:15,901 | INFO     | [data] copytool_in thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:15,929 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:16,337 | INFO     | [data] control thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:16,345 | INFO     | [job] validate thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:16,469 | INFO     | [job] control thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:16,497 | INFO     | [payload] control thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:16,549 | INFO     | [payload] validate_post thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:16,629 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:16,901 | INFO     | [payload] failed_post thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:17,181 | INFO     | [data] copytool_out thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:19,029 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 07:52:27] 2025-05-26 07:52:20,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139714643662656)>', '<ExcThread(monitor, started 139714061391616)>']
[2025-05-26 07:52:27] 2025-05-26 07:52:21,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 07:52:27] 2025-05-26 07:52:21,437 | INFO     | [monitor] control thread has ended
[2025-05-26 07:52:27] 2025-05-26 07:52:25,577 | INFO     | all workflow threads have been joined
[2025-05-26 07:52:27] 2025-05-26 07:52:25,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 07:52:27] 2025-05-26 07:52:25,577 | INFO     | traces error code: 0
[2025-05-26 07:52:27] 2025-05-26 07:52:25,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 07:52:27] 2025-05-26 07:52:25,925 [wrapper] ==== pilot stdout END ====
[2025-05-26 07:52:27] 2025-05-26 07:52:25,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 07:52:27] 2025-05-26 07:52:26,013 [wrapper] pilotpid: 3103413
[2025-05-26 07:52:27] 2025-05-26 07:52:26,053 [wrapper] Pilot exit status: 0
[2025-05-26 07:52:27] 2025-05-26 07:52:26,206 [wrapper] pandaids: 6665735266
[2025-05-26 07:52:27] 2025-05-26 07:52:26,497 [wrapper] cleanup supervisor_pilot 3704157 3103414
[2025-05-26 07:52:27] 2025-05-26 07:52:26,541 [wrapper] Test setup, not cleaning
[2025-05-26 07:52:27] 2025-05-26 07:52:26,593 [wrapper] apfmon messages muted
[2025-05-26 07:52:27] 2025-05-26 07:52:26,625 [wrapper] ==== wrapper stdout END ====
[2025-05-26 07:52:27] 2025-05-26 07:52:26,653 [wrapper] ==== wrapper stderr END ====
[2025-05-26 07:52:27]  *** Error codes and diagnostics ***
[2025-05-26 07:52:27]     "exeErrorCode": 0,
[2025-05-26 07:52:27]     "exeErrorDiag": "",
[2025-05-26 07:52:27]     "pilotErrorCode": 0,
[2025-05-26 07:52:27]     "pilotErrorDiag": "",
[2025-05-26 07:52:27]  *** Listing of results directory ***
[2025-05-26 07:52:27] total 415196
[2025-05-26 07:52:27] -rw-r--r-- 1 boinc boinc    495897 May 25 16:36 pilot3.tar.gz
[2025-05-26 07:52:27] -rw-r--r-- 1 boinc boinc      5111 May 25 16:42 queuedata.json
[2025-05-26 07:52:27] -rwx------ 1 boinc boinc     37140 May 25 16:43 runpilot2-wrapper.sh
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc       100 May 26 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 07:52:27] -rwxr-xr-x 1 boinc boinc      7986 May 26 05:17 run_atlas
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc       105 May 26 05:17 job.xml
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc      6948 May 26 05:17 init_data.xml
[2025-05-26 07:52:27] -rw-r--r-- 2 boinc boinc 222930894 May 26 05:17 EVNT.44871834._001499.pool.root.1
[2025-05-26 07:52:27] -rw-r--r-- 2 boinc boinc     15093 May 26 05:17 start_atlas.sh
[2025-05-26 07:52:27] drwxrwx--x 2 boinc boinc      4096 May 26 05:17 shared
[2025-05-26 07:52:27] -rw-r--r-- 2 boinc boinc    508876 May 26 05:17 input.tar.gz
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc         0 May 26 05:17 boinc_lockfile
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc      2559 May 26 05:17 pandaJob.out
[2025-05-26 07:52:27] -rw------- 1 boinc boinc    990811 May 26 05:19 agis_schedconf.cvmfs.json
[2025-05-26 07:52:27] -rw------- 1 boinc boinc   1596740 May 26 05:19 agis_ddmendpoints.agis.ALL.json
[2025-05-26 07:52:27] drwx------ 4 boinc boinc      4096 May 26 05:19 pilot3
[2025-05-26 07:52:27] -rw------- 1 boinc boinc 195955045 May 26 07:49 HITS.44871837._037584.pool.root.1
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc       530 May 26 07:49 boinc_task_state.xml
[2025-05-26 07:52:27] -rw------- 1 boinc boinc      1024 May 26 07:51 memory_monitor_summary.json
[2025-05-26 07:52:27] -rw------- 1 boinc boinc    402074 May 26 07:51 log.44871837._037584.job.log.tgz.1
[2025-05-26 07:52:27] -rw------- 1 boinc boinc        95 May 26 07:51 pilot_heartbeat.json
[2025-05-26 07:52:27] -rw------- 1 boinc boinc      7655 May 26 07:52 heartbeat.json
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc        27 May 26 07:52 wrapper_checkpoint.txt
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc      8192 May 26 07:52 boinc_mmap_file
[2025-05-26 07:52:27] -rw------- 1 boinc boinc      4500 May 26 07:52 pilotlog.txt
[2025-05-26 07:52:27] -rw------- 1 boinc boinc    816335 May 26 07:52 log.44871837._037584.job.log.1
[2025-05-26 07:52:27] -rw------- 1 boinc boinc       357 May 26 07:52 output.list
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc       620 May 26 07:52 runtime_log
[2025-05-26 07:52:27] -rw------- 1 boinc boinc   1239040 May 26 07:52 result.tar.gz
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc      8963 May 26 07:52 runtime_log.err
[2025-05-26 07:52:27] -rw------- 1 boinc boinc       652 May 26 07:52 JwKMDmCdTd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmreUKDmY8lKyn.diag
[2025-05-26 07:52:27] -rw-rw-r-- 1 boinc boinc     20817 May 26 07:52 stderr.txt
[2025-05-26 07:52:27] HITS file was successfully produced:
[2025-05-26 07:52:27] -rw------- 1 boinc boinc 195955045 May 26 07:49 shared/HITS.pool.root.1
[2025-05-26 07:52:27]  *** Contents of shared directory: ***
[2025-05-26 07:52:27] total 410808
[2025-05-26 07:52:27] -rw-r--r-- 2 boinc boinc 222930894 May 26 05:17 ATLAS.root_0
[2025-05-26 07:52:27] -rw-r--r-- 2 boinc boinc     15093 May 26 05:17 start_atlas.sh
[2025-05-26 07:52:27] -rw-r--r-- 2 boinc boinc    508876 May 26 05:17 input.tar.gz
[2025-05-26 07:52:27] -rw------- 1 boinc boinc 195955045 May 26 07:49 HITS.pool.root.1
[2025-05-26 07:52:27] -rw------- 1 boinc boinc   1239040 May 26 07:52 result.tar.gz
07:52:29 (3096223): run_atlas exited; CPU time 59449.268642
07:52:29 (3096223): called boinc_finish(0)

</stderr_txt>
]]>

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