Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:12 (1466293): wrapper (7.7.26015): starting
17:39:12 (1466293): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 17:39:12] Arguments: --nthreads 4
[2025-05-28 17:39:12] Threads: 4
[2025-05-28 17:39:12] Checking for CVMFS
[2025-05-28 17:39:12] No cvmfs_config command found, will try listing directly
[2025-05-28 17:39:12] CVMFS is ok
[2025-05-28 17:39:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 17:39:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 17:39:12] Further information can be found at the LHC@home message board.
[2025-05-28 17:39:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 17:39:12] Checking for apptainer binary...
[2025-05-28 17:39:12] which: no apptainer in ((null))
[2025-05-28 17:39:12] apptainer is not installed, using version from CVMFS
[2025-05-28 17:39:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 17:39:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-05-28 17:39:12] apptainer works
[2025-05-28 17:39:13] Set ATHENA_PROC_NUMBER=4
[2025-05-28 17:39:13] Set ATHENA_CORE_NUMBER=4
[2025-05-28 17:39:13] Starting ATLAS job with PandaID=6665732477
[2025-05-28 17:39:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 21:47:24]  *** The last 200 lines of the pilot log: ***
[2025-05-28 21:47:24] 2025-05-28 19:46:58,045 | INFO     | executing command: lscpu
[2025-05-28 21:47:24] 2025-05-28 19:46:58,109 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-28 21:47:24] 2025-05-28 19:46:59,669 | INFO     | monitor loop #1066: job 0:6665732477 is in state 'finished'
[2025-05-28 21:47:24] 2025-05-28 19:46:59,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 21:47:24] 2025-05-28 19:47:02,175 | INFO     | monitor loop #1067: job 0:6665732477 is in state 'finished'
[2025-05-28 21:47:24] 2025-05-28 19:47:02,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 21:47:24] 2025-05-28 19:47:03,669 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 21:47:24] 2025-05-28 19:47:03,670 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6665732477/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 21:47:24] 2025-05-28 19:47:03,671 | INFO     | extracted standard info from prmon json
[2025-05-28 21:47:24] 2025-05-28 19:47:03,671 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 21:47:24] 2025-05-28 19:47:03,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 21:47:24] 2025-05-28 19:47:03,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 21:47:24] 2025-05-28 19:47:03,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 21:47:24] 2025-05-28 19:47:03,677 | INFO     | fitting pss+swap vs Time
[2025-05-28 21:47:24] 2025-05-28 19:47:03,678 | INFO     | sum of square deviations: 4449281562.0
[2025-05-28 21:47:24] 2025-05-28 19:47:03,680 | INFO     | sum of deviations: -7438140102.999998
[2025-05-28 21:47:24] 2025-05-28 19:47:03,680 | INFO     | mean x: 1748454176.0
[2025-05-28 21:47:24] 2025-05-28 19:47:03,680 | INFO     | mean y: 2337735.53909465
[2025-05-28 21:47:24] 2025-05-28 19:47:03,680 | INFO     | -- intersect: 2925337088.0272336
[2025-05-28 21:47:24] 2025-05-28 19:47:03,681 | INFO     | intersect: 2925337088.0272336
[2025-05-28 21:47:24] 2025-05-28 19:47:03,681 | INFO     | chi2: 1.7933782016804019
[2025-05-28 21:47:24] 2025-05-28 19:47:03,682 | INFO     | sum of square deviations: 4180243959.5
[2025-05-28 21:47:24] 2025-05-28 19:47:03,684 | INFO     | sum of deviations: -7351094811.0
[2025-05-28 21:47:24] 2025-05-28 19:47:03,684 | INFO     | mean x: 1748454023.5
[2025-05-28 21:47:24] 2025-05-28 19:47:03,684 | INFO     | mean y: 2337784.9579831935
[2025-05-28 21:47:24] 2025-05-28 19:47:03,684 | INFO     | -- intersect: 3077050989.2467294
[2025-05-28 21:47:24] 2025-05-28 19:47:03,684 | INFO     | intersect: 3077050989.2467294
[2025-05-28 21:47:24] 2025-05-28 19:47:03,685 | INFO     | chi2: 1.792671310915009
[2025-05-28 21:47:24] 2025-05-28 19:47:03,685 | INFO     | current chi2=1.792671310915009 (change=0.03941671448501585 %)
[2025-05-28 21:47:24] 2025-05-28 19:47:03,685 | INFO     | right removable region: 237
[2025-05-28 21:47:24] 2025-05-28 19:47:03,685 | INFO     | sum of square deviations: 4180243959.5
[2025-05-28 21:47:24] 2025-05-28 19:47:03,687 | INFO     | sum of deviations: -44088290002.5
[2025-05-28 21:47:24] 2025-05-28 19:47:03,687 | INFO     | mean x: 1748454328.5
[2025-05-28 21:47:24] 2025-05-28 19:47:03,688 | INFO     | mean y: 2358324.1722689075
[2025-05-28 21:47:24] 2025-05-28 19:47:03,688 | INFO     | -- intersect: 18442995339.112114
[2025-05-28 21:47:24] 2025-05-28 19:47:03,688 | INFO     | intersect: 18442995339.112114
[2025-05-28 21:47:24] 2025-05-28 19:47:03,688 | INFO     | chi2: 0.23321985084856506
[2025-05-28 21:47:24] 2025-05-28 19:47:03,688 | INFO     | current chi2=0.23321985084856506 (change=86.99550096962051 %)
[2025-05-28 21:47:24] 2025-05-28 19:47:03,689 | INFO     | sum of square deviations: 3922276332.0
[2025-05-28 21:47:24] 2025-05-28 19:47:03,691 | INFO     | sum of deviations: -39387750447.00001
[2025-05-28 21:47:24] 2025-05-28 19:47:03,691 | INFO     | mean x: 1748454481.0
[2025-05-28 21:47:24] 2025-05-28 19:47:03,691 | INFO     | mean y: 2355535.60944206
[2025-05-28 21:47:24] 2025-05-28 19:47:03,691 | INFO     | -- intersect: 17560447555.72235
[2025-05-28 21:47:24] 2025-05-28 19:47:03,691 | INFO     | intersect: 17560447555.72235
[2025-05-28 21:47:24] 2025-05-28 19:47:03,692 | INFO     | chi2: 0.2286532190868305
[2025-05-28 21:47:24] 2025-05-28 19:47:03,692 | INFO     | current chi2=0.2286532190868305 (change=1.9580802170651286 %)
[2025-05-28 21:47:24] 2025-05-28 19:47:03,692 | INFO     | left removable region: 20
[2025-05-28 21:47:24] 2025-05-28 19:47:03,692 | INFO     | sum of square deviations: 3168461268.0
[2025-05-28 21:47:24] 2025-05-28 19:47:03,694 | INFO     | sum of deviations: -20152149160.999992
[2025-05-28 21:47:24] 2025-05-28 19:47:03,694 | INFO     | mean x: 1748454603.0
[2025-05-28 21:47:24] 2025-05-28 19:47:03,695 | INFO     | mean y: 2343827.3271889403
[2025-05-28 21:47:24] 2025-05-28 19:47:03,695 | INFO     | -- intersect: 11122920972.06034
[2025-05-28 21:47:24] 2025-05-28 19:47:03,695 | INFO     | intersect: 11122920972.06034
[2025-05-28 21:47:24] 2025-05-28 19:47:03,695 | INFO     | chi2: 0.1499551063150518
[2025-05-28 21:47:24] 2025-05-28 19:47:03,695 | INFO     | -- intersect: 11122920972.06034
[2025-05-28 21:47:24] 2025-05-28 19:47:03,696 | INFO     | current memory leak: -6.36 B/s (using 217 data points, chi2=0.15)
[2025-05-28 21:47:24] 2025-05-28 19:47:03,696 | INFO     | ..............................
[2025-05-28 21:47:24] 2025-05-28 19:47:03,696 | INFO     | . Timing measurements:
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | . get job = 0 s
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | . initial setup = 1 s
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | . payload setup = 7 s
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | . stage-in = 0 s
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | . payload execution = 14819 s
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | . stage-out = 1 s
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | . log creation = 0 s
[2025-05-28 21:47:24] 2025-05-28 19:47:03,697 | INFO     | ..............................
[2025-05-28 21:47:24] 2025-05-28 19:47:04,116 | INFO     | 
[2025-05-28 21:47:24] 2025-05-28 19:47:04,116 | INFO     | job summary report
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | --------------------------------------------------
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | PanDA job id: 6665732477
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | task id: 44871837
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | errors: (none)
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | pilot state: finished 
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | transexitcode: 0
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | exeerrorcode: 0
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | exeerrordiag: 
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | exitcode: 0
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | exitmsg: OK
[2025-05-28 21:47:24] 2025-05-28 19:47:04,117 | INFO     | cpuconsumptiontime: 55867 s
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | nevents: 400
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | neventsw: 0
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | pid: 1476996
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | pgrp: 1476996
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | corecount: 4
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | event service: False
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | sizes: {0: 2405245, 5: 2405451, 11: 2405507, 14830: 2436032, 14832: 2444995, 14835: 2445051, 14843: 2445349}
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | --------------------------------------------------
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | 
[2025-05-28 21:47:24] 2025-05-28 19:47:04,118 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-05-28 21:47:24] 2025-05-28 19:47:04,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 21:47:24] 2025-05-28 19:47:04,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 21:47:24] 2025-05-28 19:47:04,141 | INFO     | job 6665732477 has completed (purged errors)
[2025-05-28 21:47:24] 2025-05-28 19:47:04,141 | INFO     | overall cleanup function is called
[2025-05-28 21:47:24] 2025-05-28 19:47:05,148 | INFO     | --- collectZombieJob: --- 10, [1476996]
[2025-05-28 21:47:24] 2025-05-28 19:47:05,148 | INFO     | zombie collector waiting for pid 1476996
[2025-05-28 21:47:24] 2025-05-28 19:47:05,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 21:47:24] 2025-05-28 19:47:05,149 | INFO     | collected zombie processes
[2025-05-28 21:47:24] 2025-05-28 19:47:05,149 | INFO     | will attempt to kill all subprocesses of pid=1476996
[2025-05-28 21:47:24] 2025-05-28 19:47:05,509 | INFO     | process IDs to be killed: [1476996] (in reverse order)
[2025-05-28 21:47:24] 2025-05-28 19:47:05,627 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 21:47:24] 2025-05-28 19:47:05,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 21:47:24] 2025-05-28 19:47:05,638 | INFO     | did not find any defunct processes belonging to 1476996
[2025-05-28 21:47:24] 2025-05-28 19:47:05,648 | INFO     | did not find any defunct processes belonging to 1476996
[2025-05-28 21:47:24] 2025-05-28 19:47:05,649 | INFO     | ready for new job
[2025-05-28 21:47:24] 2025-05-28 19:47:05,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 21:47:24] 2025-05-28 19:47:05,651 | INFO     | **************************************
[2025-05-28 21:47:24] 2025-05-28 19:47:05,651 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 21:47:24] 2025-05-28 19:47:05,651 | INFO     | **************************************
[2025-05-28 21:47:24] 2025-05-28 19:47:05,651 | INFO     | 
[2025-05-28 21:47:24] 2025-05-28 19:47:05,655 | INFO     | architecture information:
[2025-05-28 21:47:24] 2025-05-28 19:47:05,655 | INFO     | executing command: cat /etc/os-release
[2025-05-28 21:47:24] 2025-05-28 19:47:05,672 | INFO     | cat /etc/os-release:
[2025-05-28 21:47:24] NAME="CentOS Linux"
[2025-05-28 21:47:24] VERSION="7 (Core)"
[2025-05-28 21:47:24] ID="centos"
[2025-05-28 21:47:24] ID_LIKE="rhel fedora"
[2025-05-28 21:47:24] VERSION_ID="7"
[2025-05-28 21:47:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 21:47:24] ANSI_COLOR="0;31"
[2025-05-28 21:47:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 21:47:24] HOME_URL="https://www.centos.org/"
[2025-05-28 21:47:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 21:47:24] 
[2025-05-28 21:47:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 21:47:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 21:47:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 21:47:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 21:47:24] 
[2025-05-28 21:47:24] 2025-05-28 19:47:05,672 | INFO     | **************************************
[2025-05-28 21:47:24] 2025-05-28 19:47:06,175 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-05-28 21:47:24] 2025-05-28 19:47:06,191 | INFO     | sufficient remaining disk space (663241097216 B)
[2025-05-28 21:47:24] 2025-05-28 19:47:06,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 21:47:24] 2025-05-28 19:47:06,192 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 21:47:24] 2025-05-28 19:47:06,192 | INFO     | update_server=False
[2025-05-28 21:47:24] 2025-05-28 19:47:06,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 21:47:24] 2025-05-28 19:47:06,192 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 21:47:24] 2025-05-28 19:47:06,192 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 21:47:24] 2025-05-28 19:47:06,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 21:47:24] 2025-05-28 19:47:06,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 21:47:24] 2025-05-28 19:47:06,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 21:47:24] 2025-05-28 19:47:06,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 21:47:24] 2025-05-28 19:47:06,193 | INFO     | aborting loop
[2025-05-28 21:47:24] 2025-05-28 19:47:06,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 21:47:24] 2025-05-28 19:47:06,753 | INFO     | all job control threads have been joined
[2025-05-28 21:47:24] 2025-05-28 19:47:06,889 | INFO     | all data control threads have been joined
[2025-05-28 21:47:24] 2025-05-28 19:47:07,013 | INFO     | all payload control threads have been joined
[2025-05-28 21:47:24] 2025-05-28 19:47:07,197 | INFO     | [job] retrieve thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:07,198 | INFO     | [job] job monitor thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:07,421 | INFO     | [payload] failed_post thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:07,758 | INFO     | [job] control thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:07,837 | INFO     | [job] validate thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:07,894 | INFO     | [data] control thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,018 | INFO     | [payload] control thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,187 | INFO     | [payload] validate_post thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,188 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,198 | INFO     | [data] copytool_out thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,292 | INFO     | [data] copytool_in thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,301 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,441 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:08,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 21:47:24] 2025-05-28 19:47:09,826 | INFO     | [job] queue monitor thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:10,198 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:17,028 | INFO     | job.realtimelogging is not enabled
[2025-05-28 21:47:24] 2025-05-28 19:47:18,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 21:47:24] 2025-05-28 19:47:18,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23047260346176)>', '<ExcThread(monitor, started 23047023068928)>']
[2025-05-28 21:47:24] 2025-05-28 19:47:19,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 21:47:24] 2025-05-28 19:47:19,258 | INFO     | [monitor] control thread has ended
[2025-05-28 21:47:24] 2025-05-28 19:47:23,685 | INFO     | all workflow threads have been joined
[2025-05-28 21:47:24] 2025-05-28 19:47:23,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 21:47:24] 2025-05-28 19:47:23,686 | INFO     | traces error code: 0
[2025-05-28 21:47:24] 2025-05-28 19:47:23,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 21:47:24] 2025-05-28 19:47:23,831 [wrapper] ==== pilot stdout END ====
[2025-05-28 21:47:24] 2025-05-28 19:47:23,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 21:47:24] 2025-05-28 19:47:23,838 [wrapper] pilotpid: 1469969
[2025-05-28 21:47:24] 2025-05-28 19:47:23,841 [wrapper] Pilot exit status: 0
[2025-05-28 21:47:24] 2025-05-28 19:47:23,857 [wrapper] pandaids: 6665732477
[2025-05-28 21:47:24] 2025-05-28 19:47:23,928 [wrapper] cleanup supervisor_pilot 2079834 1469970
[2025-05-28 21:47:24] 2025-05-28 19:47:23,931 [wrapper] Test setup, not cleaning
[2025-05-28 21:47:24] 2025-05-28 19:47:23,934 [wrapper] apfmon messages muted
[2025-05-28 21:47:24] 2025-05-28 19:47:23,938 [wrapper] ==== wrapper stdout END ====
[2025-05-28 21:47:24] 2025-05-28 19:47:23,944 [wrapper] ==== wrapper stderr END ====
[2025-05-28 21:47:24]  *** Error codes and diagnostics ***
[2025-05-28 21:47:24]     "exeErrorCode": 0,
[2025-05-28 21:47:24]     "exeErrorDiag": "",
[2025-05-28 21:47:24]     "pilotErrorCode": 0,
[2025-05-28 21:47:24]     "pilotErrorDiag": "",
[2025-05-28 21:47:24]  *** Listing of results directory ***
[2025-05-28 21:47:24] total 417576
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc    495897 May 25 16:50 pilot3.tar.gz
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc      5111 May 25 17:16 queuedata.json
[2025-05-28 21:47:24] -rwx------ 1 boinc boinc     37140 May 25 17:16 runpilot2-wrapper.sh
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc       100 May 28 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 21:47:24] -rwxr-xr-x 1 boinc boinc      7986 May 28 17:39 run_atlas
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc       105 May 28 17:39 job.xml
[2025-05-28 21:47:24] -rw-r--r-- 2 boinc boinc 225677955 May 28 17:39 EVNT.44871834._001452.pool.root.1
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc      6636 May 28 17:39 init_data.xml
[2025-05-28 21:47:24] -rw-r--r-- 2 boinc boinc    508875 May 28 17:39 input.tar.gz
[2025-05-28 21:47:24] -rw-r--r-- 2 boinc boinc     15093 May 28 17:39 start_atlas.sh
[2025-05-28 21:47:24] drwxrwx--x 2 boinc boinc      4096 May 28 17:39 shared
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc         0 May 28 17:39 boinc_lockfile
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc      2559 May 28 17:39 pandaJob.out
[2025-05-28 21:47:24] -rw------- 1 boinc boinc    991935 May 28 17:39 agis_schedconf.cvmfs.json
[2025-05-28 21:47:24] drwx------ 4 boinc boinc      4096 May 28 17:39 pilot3
[2025-05-28 21:47:24] -rw------- 1 boinc boinc 194654530 May 28 21:46 HITS.44871837._036407.pool.root.1
[2025-05-28 21:47:24] -rw------- 1 boinc boinc        95 May 28 21:46 pilot_heartbeat.json
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc       530 May 28 21:46 boinc_task_state.xml
[2025-05-28 21:47:24] -rw------- 1 boinc boinc      1032 May 28 21:46 memory_monitor_summary.json
[2025-05-28 21:47:24] -rw------- 1 boinc boinc   1603667 May 28 21:46 agis_ddmendpoints.agis.ALL.json
[2025-05-28 21:47:24] -rw------- 1 boinc boinc    340951 May 28 21:46 log.44871837._036407.job.log.tgz.1
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc      8192 May 28 21:46 boinc_mmap_file
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc        28 May 28 21:46 wrapper_checkpoint.txt
[2025-05-28 21:47:24] -rw------- 1 boinc boinc      7725 May 28 21:47 heartbeat.json
[2025-05-28 21:47:24] -rw------- 1 boinc boinc      4558 May 28 21:47 pilotlog.txt
[2025-05-28 21:47:24] -rw------- 1 boinc boinc   1366399 May 28 21:47 log.44871837._036407.job.log.1
[2025-05-28 21:47:24] -rw------- 1 boinc boinc       357 May 28 21:47 output.list
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc       620 May 28 21:47 runtime_log
[2025-05-28 21:47:24] -rw------- 1 boinc boinc   1730560 May 28 21:47 result.tar.gz
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc      9026 May 28 21:47 runtime_log.err
[2025-05-28 21:47:24] -rw------- 1 boinc boinc       665 May 28 21:47 TJOLDmzGSd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIiOKDm3y1Zlm.diag
[2025-05-28 21:47:24] -rw-r--r-- 1 boinc boinc     20910 May 28 21:47 stderr.txt
[2025-05-28 21:47:24] HITS file was successfully produced:
[2025-05-28 21:47:24] -rw------- 1 boinc boinc 194654530 May 28 21:46 shared/HITS.pool.root.1
[2025-05-28 21:47:24]  *** Contents of shared directory: ***
[2025-05-28 21:47:24] total 412700
[2025-05-28 21:47:24] -rw-r--r-- 2 boinc boinc 225677955 May 28 17:39 ATLAS.root_0
[2025-05-28 21:47:24] -rw-r--r-- 2 boinc boinc    508875 May 28 17:39 input.tar.gz
[2025-05-28 21:47:24] -rw-r--r-- 2 boinc boinc     15093 May 28 17:39 start_atlas.sh
[2025-05-28 21:47:24] -rw------- 1 boinc boinc 194654530 May 28 21:46 HITS.pool.root.1
[2025-05-28 21:47:24] -rw------- 1 boinc boinc   1730560 May 28 21:47 result.tar.gz
21:47:25 (1466293): run_atlas exited; CPU time 56390.878769
21:47:25 (1466293): called boinc_finish(0)

</stderr_txt>
]]>

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