Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:57:49 (31942): wrapper (7.7.26015): starting
11:57:49 (31942): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 11:57:49] Arguments: --nthreads 8
[2025-05-26 11:57:49] Threads: 8
[2025-05-26 11:57:49] Checking for CVMFS
[2025-05-26 11:57:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 11:57:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 11:57:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 11:57:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 11:57:51] 2.11.2.0 22299 20097 91340 146432 2 59 20030117 25165825 3450 130560 0 11600491 99.710 14217314 1787 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-26 11:57:51] CVMFS is ok
[2025-05-26 11:57:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 11:57:51] Checking for apptainer binary...
[2025-05-26 11:57:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 11:57:51] Running /usr/bin/apptainer --version
[2025-05-26 11:57:51] apptainer version 1.3.2-1.el7
[2025-05-26 11:57:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 11:58:03] cg-vwn422.simple-grid.lan
[2025-05-26 11:58:03] apptainer works
[2025-05-26 11:58:03] Set ATHENA_PROC_NUMBER=8
[2025-05-26 11:58:03] Set ATHENA_CORE_NUMBER=8
[2025-05-26 11:58:03] Starting ATLAS job with PandaID=6665734591
[2025-05-26 11:58:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 17:25:15]  *** The last 200 lines of the pilot log: ***
[2025-05-26 17:25:15] 2025-05-26 15:24:58,218 | INFO     | extracted standard info from prmon json
[2025-05-26 17:25:15] 2025-05-26 15:24:58,218 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 17:25:15] 2025-05-26 15:24:58,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 17:25:15] 2025-05-26 15:24:58,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 17:25:15] 2025-05-26 15:24:58,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 17:25:15] 2025-05-26 15:24:58,225 | INFO     | fitting pss+swap vs Time
[2025-05-26 17:25:15] 2025-05-26 15:24:58,226 | INFO     | sum of square deviations: 9327281860.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,230 | INFO     | sum of deviations: 173782455371.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,230 | INFO     | mean x: 1748263609.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,230 | INFO     | mean y: 2436808.080385852
[2025-05-26 17:25:15] 2025-05-26 15:24:58,230 | INFO     | -- intersect: -32570562182.19414
[2025-05-26 17:25:15] 2025-05-26 15:24:58,230 | INFO     | intersect: -32570562182.19414
[2025-05-26 17:25:15] 2025-05-26 15:24:58,231 | INFO     | chi2: 7.690604924618385
[2025-05-26 17:25:15] 2025-05-26 15:24:58,232 | INFO     | sum of square deviations: 8884603792.5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,235 | INFO     | sum of deviations: 191477500101.5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,236 | INFO     | mean x: 1748263456.5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,236 | INFO     | mean y: 2442811.1666666665
[2025-05-26 17:25:15] 2025-05-26 15:24:58,236 | INFO     | -- intersect: -37675446263.86577
[2025-05-26 17:25:15] 2025-05-26 15:24:58,236 | INFO     | intersect: -37675446263.86577
[2025-05-26 17:25:15] 2025-05-26 15:24:58,236 | INFO     | chi2: 6.964792602348325
[2025-05-26 17:25:15] 2025-05-26 15:24:58,237 | INFO     | current chi2=6.964792602348325 (change=9.43764930566987 %)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,237 | INFO     | right removable region: 305
[2025-05-26 17:25:15] 2025-05-26 15:24:58,237 | INFO     | sum of square deviations: 8884603792.5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,241 | INFO     | sum of deviations: 62181728752.5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,241 | INFO     | mean x: 1748263761.5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,241 | INFO     | mean y: 2475241.1013071896
[2025-05-26 17:25:15] 2025-05-26 15:24:58,241 | INFO     | -- intersect: -12233305390.690817
[2025-05-26 17:25:15] 2025-05-26 15:24:58,241 | INFO     | intersect: -12233305390.690817
[2025-05-26 17:25:15] 2025-05-26 15:24:58,242 | INFO     | chi2: 2.598835018474421
[2025-05-26 17:25:15] 2025-05-26 15:24:58,242 | INFO     | current chi2=2.598835018474421 (change=66.20766449521685 %)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,242 | INFO     | sum of square deviations: 8456158550.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,246 | INFO     | sum of deviations: -1915836820.9999962
[2025-05-26 17:25:15] 2025-05-26 15:24:58,246 | INFO     | mean x: 1748263914.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,246 | INFO     | mean y: 2497979.0332225915
[2025-05-26 17:25:15] 2025-05-26 15:24:58,246 | INFO     | -- intersect: 398586623.7129952
[2025-05-26 17:25:15] 2025-05-26 15:24:58,246 | INFO     | intersect: 398586623.7129952
[2025-05-26 17:25:15] 2025-05-26 15:24:58,247 | INFO     | chi2: 0.8230936212330049
[2025-05-26 17:25:15] 2025-05-26 15:24:58,247 | INFO     | current chi2=0.8230936212330049 (change=68.3283619244064 %)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,248 | INFO     | sum of square deviations: 8041713570.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,251 | INFO     | sum of deviations: -2602852676.000004
[2025-05-26 17:25:15] 2025-05-26 15:24:58,251 | INFO     | mean x: 1748264066.5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,251 | INFO     | mean y: 2498204.5135135134
[2025-05-26 17:25:15] 2025-05-26 15:24:58,251 | INFO     | -- intersect: 568356931.541536
[2025-05-26 17:25:15] 2025-05-26 15:24:58,251 | INFO     | intersect: 568356931.541536
[2025-05-26 17:25:15] 2025-05-26 15:24:58,252 | INFO     | chi2: 0.7971806776371845
[2025-05-26 17:25:15] 2025-05-26 15:24:58,252 | INFO     | current chi2=0.7971806776371845 (change=3.1482376885636034 %)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,252 | INFO     | left removable region: 30
[2025-05-26 17:25:15] 2025-05-26 15:24:58,253 | INFO     | sum of square deviations: 6448679050.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,255 | INFO     | sum of deviations: 8515686558.999998
[2025-05-26 17:25:15] 2025-05-26 15:24:58,255 | INFO     | mean x: 1748264341.0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,256 | INFO     | mean y: 2508983.421818182
[2025-05-26 17:25:15] 2025-05-26 15:24:58,256 | INFO     | -- intersect: -2306129892.04411
[2025-05-26 17:25:15] 2025-05-26 15:24:58,256 | INFO     | intersect: -2306129892.04411
[2025-05-26 17:25:15] 2025-05-26 15:24:58,256 | INFO     | chi2: 0.0014830141831176198
[2025-05-26 17:25:15] 2025-05-26 15:24:58,256 | INFO     | -- intersect: -2306129892.04411
[2025-05-26 17:25:15] 2025-05-26 15:24:58,257 | INFO     | current memory leak: 1.32 B/s (using 275 data points, chi2=0.00)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,257 | INFO     | ..............................
[2025-05-26 17:25:15] 2025-05-26 15:24:58,257 | INFO     | . Timing measurements:
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | . get job = 0 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | . initial setup = 4 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | . payload setup = 154 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | . stage-in = 0 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | . payload execution = 19073 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | . stage-out = 4 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | . log creation = 0 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,258 | INFO     | ..............................
[2025-05-26 17:25:15] 2025-05-26 15:24:58,387 | INFO     | 
[2025-05-26 17:25:15] 2025-05-26 15:24:58,387 | INFO     | job summary report
[2025-05-26 17:25:15] 2025-05-26 15:24:58,387 | INFO     | --------------------------------------------------
[2025-05-26 17:25:15] 2025-05-26 15:24:58,387 | INFO     | PanDA job id: 6665734591
[2025-05-26 17:25:15] 2025-05-26 15:24:58,387 | INFO     | task id: 44871837
[2025-05-26 17:25:15] 2025-05-26 15:24:58,387 | INFO     | errors: (none)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | pilot state: finished 
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | transexitcode: 0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | exeerrorcode: 0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | exeerrordiag: 
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | exitcode: 0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | exitmsg: OK
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | cpuconsumptiontime: 72156 s
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | nevents: 400
[2025-05-26 17:25:15] 2025-05-26 15:24:58,388 | INFO     | neventsw: 0
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | pid: 15231
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | pgrp: 15231
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | corecount: 8
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | event service: False
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | sizes: {0: 2393569, 1: 2393768, 12: 2393768, 23: 2393796, 33: 2393824, 44: 2393880, 55: 2394036, 66: 2394064, 76: 2394092, 85: 2394354, 87: 2394382, 19232: 2426560
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | --------------------------------------------------
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | 
[2025-05-26 17:25:15] 2025-05-26 15:24:58,389 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-26 17:25:15] 2025-05-26 15:24:58,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 17:25:15] 2025-05-26 15:24:58,419 | INFO     | job 6665734591 has completed (purged errors)
[2025-05-26 17:25:15] 2025-05-26 15:24:58,419 | INFO     | overall cleanup function is called
[2025-05-26 17:25:15] 2025-05-26 15:24:59,427 | INFO     | --- collectZombieJob: --- 10, [15231]
[2025-05-26 17:25:15] 2025-05-26 15:24:59,427 | INFO     | zombie collector waiting for pid 15231
[2025-05-26 17:25:15] 2025-05-26 15:24:59,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 17:25:15] 2025-05-26 15:24:59,427 | INFO     | collected zombie processes
[2025-05-26 17:25:15] 2025-05-26 15:24:59,427 | INFO     | will attempt to kill all subprocesses of pid=15231
[2025-05-26 17:25:15] 2025-05-26 15:24:59,533 | INFO     | process IDs to be killed: [15231] (in reverse order)
[2025-05-26 17:25:15] 2025-05-26 15:24:59,674 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 17:25:15] 2025-05-26 15:24:59,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 17:25:15] 2025-05-26 15:24:59,678 | INFO     | did not find any defunct processes belonging to 15231
[2025-05-26 17:25:15] 2025-05-26 15:24:59,693 | INFO     | did not find any defunct processes belonging to 15231
[2025-05-26 17:25:15] 2025-05-26 15:24:59,693 | INFO     | ready for new job
[2025-05-26 17:25:15] 2025-05-26 15:24:59,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 17:25:15] 2025-05-26 15:24:59,695 | INFO     | **************************************
[2025-05-26 17:25:15] 2025-05-26 15:24:59,695 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 17:25:15] 2025-05-26 15:24:59,695 | INFO     | **************************************
[2025-05-26 17:25:15] 2025-05-26 15:24:59,695 | INFO     | 
[2025-05-26 17:25:15] 2025-05-26 15:24:59,696 | INFO     | pilot is running in a VM
[2025-05-26 17:25:15] 2025-05-26 15:24:59,696 | INFO     | architecture information:
[2025-05-26 17:25:15] 2025-05-26 15:24:59,697 | INFO     | executing command: cat /etc/os-release
[2025-05-26 17:25:15] 2025-05-26 15:24:59,736 | INFO     | cat /etc/os-release:
[2025-05-26 17:25:15] NAME="CentOS Linux"
[2025-05-26 17:25:15] VERSION="7 (Core)"
[2025-05-26 17:25:15] ID="centos"
[2025-05-26 17:25:15] ID_LIKE="rhel fedora"
[2025-05-26 17:25:15] VERSION_ID="7"
[2025-05-26 17:25:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 17:25:15] ANSI_COLOR="0;31"
[2025-05-26 17:25:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 17:25:15] HOME_URL="https://www.centos.org/"
[2025-05-26 17:25:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 17:25:15] 
[2025-05-26 17:25:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 17:25:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 17:25:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 17:25:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 17:25:15] 
[2025-05-26 17:25:15] 2025-05-26 15:24:59,737 | INFO     | **************************************
[2025-05-26 17:25:15] 2025-05-26 15:25:00,239 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-26 17:25:15] 2025-05-26 15:25:00,267 | INFO     | sufficient remaining disk space (494290337792 B)
[2025-05-26 17:25:15] 2025-05-26 15:25:00,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 17:25:15] 2025-05-26 15:25:00,268 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 17:25:15] 2025-05-26 15:25:00,268 | INFO     | update_server=False
[2025-05-26 17:25:15] 2025-05-26 15:25:00,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 17:25:15] 2025-05-26 15:25:00,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 17:25:15] 2025-05-26 15:25:00,269 | INFO     | aborting loop
[2025-05-26 17:25:15] 2025-05-26 15:25:00,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 17:25:15] 2025-05-26 15:25:00,270 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 17:25:15] 2025-05-26 15:25:00,270 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 17:25:15] 2025-05-26 15:25:00,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 17:25:15] 2025-05-26 15:25:00,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 17:25:15] 2025-05-26 15:25:00,667 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 17:25:15] 2025-05-26 15:25:01,044 | INFO     | all data control threads have been joined
[2025-05-26 17:25:15] 2025-05-26 15:25:01,273 | INFO     | [job] retrieve thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:01,275 | INFO     | [job] job monitor thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:01,275 | INFO     | [job] queue monitor thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:01,321 | INFO     | all payload control threads have been joined
[2025-05-26 17:25:15] 2025-05-26 15:25:01,387 | INFO     | [job] validate thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:01,450 | INFO     | all job control threads have been joined
[2025-05-26 17:25:15] 2025-05-26 15:25:01,626 | INFO     | [data] copytool_in thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:01,794 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:01,819 | INFO     | [payload] validate_post thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,050 | INFO     | [data] control thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,107 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,327 | INFO     | [payload] control thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,455 | INFO     | [job] control thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,503 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,674 | INFO     | [data] copytool_out thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:02,796 | INFO     | [payload] failed_post thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:03,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 17:25:15] 2025-05-26 15:25:07,336 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 17:25:15] 2025-05-26 15:25:09,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139867662010176)>', '<ExcThread(monitor, started 139866943776512)>']
[2025-05-26 17:25:15] 2025-05-26 15:25:09,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 17:25:15] 2025-05-26 15:25:09,320 | INFO     | [monitor] control thread has ended
[2025-05-26 17:25:15] 2025-05-26 15:25:14,137 | INFO     | all workflow threads have been joined
[2025-05-26 17:25:15] 2025-05-26 15:25:14,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 17:25:15] 2025-05-26 15:25:14,137 | INFO     | traces error code: 0
[2025-05-26 17:25:15] 2025-05-26 15:25:14,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 17:25:15] 2025-05-26 15:25:14,478 [wrapper] ==== pilot stdout END ====
[2025-05-26 17:25:15] 2025-05-26 15:25:14,528 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 17:25:15] 2025-05-26 15:25:14,554 [wrapper] pilotpid: 6607
[2025-05-26 17:25:15] 2025-05-26 15:25:14,602 [wrapper] Pilot exit status: 0
[2025-05-26 17:25:15] 2025-05-26 15:25:14,762 [wrapper] pandaids: 6665734591
[2025-05-26 17:25:15] 2025-05-26 15:25:14,823 [wrapper] cleanup supervisor_pilot 29420 6608
[2025-05-26 17:25:15] 2025-05-26 15:25:14,833 [wrapper] Test setup, not cleaning
[2025-05-26 17:25:15] 2025-05-26 15:25:14,838 [wrapper] apfmon messages muted
[2025-05-26 17:25:15] 2025-05-26 15:25:14,848 [wrapper] ==== wrapper stdout END ====
[2025-05-26 17:25:15] 2025-05-26 15:25:14,852 [wrapper] ==== wrapper stderr END ====
[2025-05-26 17:25:15]  *** Error codes and diagnostics ***
[2025-05-26 17:25:15]     "exeErrorCode": 0,
[2025-05-26 17:25:15]     "exeErrorDiag": "",
[2025-05-26 17:25:15]     "pilotErrorCode": 0,
[2025-05-26 17:25:15]     "pilotErrorDiag": "",
[2025-05-26 17:25:15]  *** Listing of results directory ***
[2025-05-26 17:25:15] total 423688
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc    495897 May 25 17:56 pilot3.tar.gz
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc      5111 May 25 18:08 queuedata.json
[2025-05-26 17:25:15] -rwx------. 1 boinc boinc     37140 May 25 18:09 runpilot2-wrapper.sh
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc       100 May 26 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 17:25:15] -rwxr-xr-x. 1 boinc boinc      7986 May 26 11:57 run_atlas
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc       105 May 26 11:57 job.xml
[2025-05-26 17:25:15] -rw-r--r--. 2 boinc boinc 222801062 May 26 11:57 EVNT.44871834._001486.pool.root.1
[2025-05-26 17:25:15] -rw-r--r--. 2 boinc boinc     15093 May 26 11:57 start_atlas.sh
[2025-05-26 17:25:15] drwxrwx--x. 2 boinc boinc        68 May 26 11:57 shared
[2025-05-26 17:25:15] -rw-r--r--. 2 boinc boinc    508879 May 26 11:57 input.tar.gz
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc      6371 May 26 11:57 init_data.xml
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc         0 May 26 11:57 boinc_lockfile
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc      2559 May 26 11:58 pandaJob.out
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc    989949 May 26 12:01 agis_schedconf.cvmfs.json
[2025-05-26 17:25:15] drwx------. 4 boinc boinc      4096 May 26 12:01 pilot3
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc 203050122 May 26 17:23 HITS.44871837._037248.pool.root.1
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc       531 May 26 17:23 boinc_task_state.xml
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc      1017 May 26 17:24 memory_monitor_summary.json
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc   1603667 May 26 17:24 agis_ddmendpoints.agis.ALL.json
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc    420164 May 26 17:24 log.44871837._037248.job.log.tgz.1
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc        95 May 26 17:24 pilot_heartbeat.json
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc      7689 May 26 17:24 heartbeat.json
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc      8192 May 26 17:25 boinc_mmap_file
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc        28 May 26 17:25 wrapper_checkpoint.txt
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc      4539 May 26 17:25 pilotlog.txt
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc   1667948 May 26 17:25 log.44871837._037248.job.log.1
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc       357 May 26 17:25 output.list
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc       620 May 26 17:25 runtime_log
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc   2109440 May 26 17:25 result.tar.gz
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc      8659 May 26 17:25 runtime_log.err
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc       657 May 26 17:25 gWYNDmk5Sd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKnOKDm62OXLo.diag
[2025-05-26 17:25:15] -rw-r--r--. 1 boinc boinc     20500 May 26 17:25 stderr.txt
[2025-05-26 17:25:15] HITS file was successfully produced:
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc 203050122 May 26 17:23 shared/HITS.pool.root.1
[2025-05-26 17:25:15]  *** Contents of shared directory: ***
[2025-05-26 17:25:15] total 418448
[2025-05-26 17:25:15] -rw-r--r--. 2 boinc boinc 222801062 May 26 11:57 ATLAS.root_0
[2025-05-26 17:25:15] -rw-r--r--. 2 boinc boinc     15093 May 26 11:57 start_atlas.sh
[2025-05-26 17:25:15] -rw-r--r--. 2 boinc boinc    508879 May 26 11:57 input.tar.gz
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc 203050122 May 26 17:23 HITS.pool.root.1
[2025-05-26 17:25:15] -rw-------. 1 boinc boinc   2109440 May 26 17:25 result.tar.gz
17:25:16 (31942): run_atlas exited; CPU time 72430.244158
17:25:16 (31942): called boinc_finish(0)

</stderr_txt>
]]>

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