Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:31:27 (12305): wrapper (7.7.26015): starting
09:31:27 (12305): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 09:31:27] Arguments: --nthreads 8
[2025-05-26 09:31:27] Threads: 8
[2025-05-26 09:31:27] Checking for CVMFS
[2025-05-26 09:31:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 09:31:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 09:31:29] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 09:31:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 09:31:29] 2.11.2.0 24996 19973 88592 146429 1 60 18630829 25165825 3344 130560 0 10721281 99.743 13364593 1976 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-26 09:31:29] CVMFS is ok
[2025-05-26 09:31:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 09:31:29] Checking for apptainer binary...
[2025-05-26 09:31:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 09:31:29] Running /usr/bin/apptainer --version
[2025-05-26 09:31:29] apptainer version 1.3.2-1.el7
[2025-05-26 09:31:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 09:31:53] cg-vwn259.simple-grid.lan
[2025-05-26 09:31:53] apptainer works
[2025-05-26 09:31:53] Set ATHENA_PROC_NUMBER=8
[2025-05-26 09:31:53] Set ATHENA_CORE_NUMBER=8
[2025-05-26 09:31:53] Starting ATLAS job with PandaID=6665739038
[2025-05-26 09:31:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 16:59:40]  *** The last 200 lines of the pilot log: ***
[2025-05-26 16:59:40] 2025-05-26 12:54:34,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 16:59:40] 2025-05-26 12:54:34,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 16:59:40] 2025-05-26 12:54:34,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 16:59:40] 2025-05-26 12:54:34,777 | INFO     | fitting pss+swap vs Time
[2025-05-26 16:59:40] 2025-05-26 12:54:34,778 | INFO     | sum of square deviations: 9508390372.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,781 | INFO     | sum of deviations: -32088576640.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,782 | INFO     | mean x: 1748254447.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,782 | INFO     | mean y: 2517868.6932907347
[2025-05-26 16:59:40] 2025-05-26 12:54:34,782 | INFO     | -- intersect: 5902464611.937954
[2025-05-26 16:59:40] 2025-05-26 12:54:34,782 | INFO     | intersect: 5902464611.937954
[2025-05-26 16:59:40] 2025-05-26 12:54:34,782 | INFO     | chi2: 2.4824175986752794
[2025-05-26 16:59:40] 2025-05-26 12:54:34,783 | INFO     | sum of square deviations: 9059954057.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,786 | INFO     | sum of deviations: -10770534722.999998
[2025-05-26 16:59:40] 2025-05-26 12:54:34,787 | INFO     | mean x: 1748254294.5
[2025-05-26 16:59:40] 2025-05-26 12:54:34,787 | INFO     | mean y: 2525026.5194805195
[2025-05-26 16:59:40] 2025-05-26 12:54:34,787 | INFO     | -- intersect: 2080861568.3033495
[2025-05-26 16:59:40] 2025-05-26 12:54:34,787 | INFO     | intersect: 2080861568.3033495
[2025-05-26 16:59:40] 2025-05-26 12:54:34,788 | INFO     | chi2: 1.7134899687516438
[2025-05-26 16:59:40] 2025-05-26 12:54:34,788 | INFO     | current chi2=1.7134899687516438 (change=30.97495080336069 %)
[2025-05-26 16:59:40] 2025-05-26 12:54:34,789 | INFO     | sum of square deviations: 8625843592.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,792 | INFO     | sum of deviations: -10644227513.000011
[2025-05-26 16:59:40] 2025-05-26 12:54:34,792 | INFO     | mean x: 1748254142.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,792 | INFO     | mean y: 2525070.894389439
[2025-05-26 16:59:40] 2025-05-26 12:54:34,793 | INFO     | -- intersect: 2159857816.3259544
[2025-05-26 16:59:40] 2025-05-26 12:54:34,793 | INFO     | intersect: 2159857816.3259544
[2025-05-26 16:59:40] 2025-05-26 12:54:34,793 | INFO     | chi2: 1.7130728659686953
[2025-05-26 16:59:40] 2025-05-26 12:54:34,793 | INFO     | current chi2=1.7130728659686953 (change=0.02434229499763952 %)
[2025-05-26 16:59:40] 2025-05-26 12:54:34,794 | INFO     | right removable region: 302
[2025-05-26 16:59:40] 2025-05-26 12:54:34,794 | INFO     | sum of square deviations: 9059954057.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,798 | INFO     | sum of deviations: -81358826768.5
[2025-05-26 16:59:40] 2025-05-26 12:54:34,798 | INFO     | mean x: 1748254599.5
[2025-05-26 16:59:40] 2025-05-26 12:54:34,798 | INFO     | mean y: 2534507.353896104
[2025-05-26 16:59:40] 2025-05-26 12:54:34,798 | INFO     | -- intersect: 15701945587.486025
[2025-05-26 16:59:40] 2025-05-26 12:54:34,799 | INFO     | intersect: 15701945587.486025
[2025-05-26 16:59:40] 2025-05-26 12:54:34,799 | INFO     | chi2: 1.0087762187147657
[2025-05-26 16:59:40] 2025-05-26 12:54:34,799 | INFO     | current chi2=1.0087762187147657 (change=59.36315391684741 %)
[2025-05-26 16:59:40] 2025-05-26 12:54:34,800 | INFO     | sum of square deviations: 8625843592.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,803 | INFO     | sum of deviations: -77047068273.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,804 | INFO     | mean x: 1748254752.0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,804 | INFO     | mean y: 2532978.607260726
[2025-05-26 16:59:40] 2025-05-26 12:54:34,804 | INFO     | -- intersect: 15618153850.850489
[2025-05-26 16:59:40] 2025-05-26 12:54:34,804 | INFO     | intersect: 15618153850.850489
[2025-05-26 16:59:40] 2025-05-26 12:54:34,805 | INFO     | chi2: 0.9993111904026493
[2025-05-26 16:59:40] 2025-05-26 12:54:34,805 | INFO     | current chi2=0.9993111904026493 (change=0.9382683826721682 %)
[2025-05-26 16:59:40] 2025-05-26 12:54:34,805 | INFO     | left removable region: 20
[2025-05-26 16:59:40] 2025-05-26 12:54:34,806 | INFO     | sum of square deviations: 6953769450.5
[2025-05-26 16:59:40] 2025-05-26 12:54:34,808 | INFO     | sum of deviations: -36863400409.49999
[2025-05-26 16:59:40] 2025-05-26 12:54:34,809 | INFO     | mean x: 1748254721.5
[2025-05-26 16:59:40] 2025-05-26 12:54:34,809 | INFO     | mean y: 2533890.485815603
[2025-05-26 16:59:40] 2025-05-26 12:54:34,809 | INFO     | -- intersect: 9270401379.509264
[2025-05-26 16:59:40] 2025-05-26 12:54:34,809 | INFO     | intersect: 9270401379.509264
[2025-05-26 16:59:40] 2025-05-26 12:54:34,810 | INFO     | chi2: 0.18025598842713958
[2025-05-26 16:59:40] 2025-05-26 12:54:34,810 | INFO     | -- intersect: 9270401379.509264
[2025-05-26 16:59:40] 2025-05-26 12:54:34,810 | INFO     | current memory leak: -5.30 B/s (using 282 data points, chi2=0.18)
[2025-05-26 16:59:40] 2025-05-26 12:54:34,816 | INFO     | ..............................
[2025-05-26 16:59:40] 2025-05-26 12:54:34,816 | INFO     | . Timing measurements:
[2025-05-26 16:59:40] 2025-05-26 12:54:34,816 | INFO     | . get job = 0 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,816 | INFO     | . initial setup = 5 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,816 | INFO     | . payload setup = 13 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,817 | INFO     | . stage-in = 0 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,817 | INFO     | . payload execution = 19075 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,817 | INFO     | . stage-out = 2 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,817 | INFO     | . log creation = 0 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,817 | INFO     | ..............................
[2025-05-26 16:59:40] 2025-05-26 12:54:34,992 | INFO     | 
[2025-05-26 16:59:40] 2025-05-26 12:54:34,992 | INFO     | job summary report
[2025-05-26 16:59:40] 2025-05-26 12:54:34,992 | INFO     | --------------------------------------------------
[2025-05-26 16:59:40] 2025-05-26 12:54:34,992 | INFO     | PanDA job id: 6665739038
[2025-05-26 16:59:40] 2025-05-26 12:54:34,992 | INFO     | task id: 44871837
[2025-05-26 16:59:40] 2025-05-26 12:54:34,992 | INFO     | errors: (none)
[2025-05-26 16:59:40] 2025-05-26 12:54:34,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | pilot state: finished 
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | transexitcode: 0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | exeerrorcode: 0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | exeerrordiag: 
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | exitcode: 0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | exitmsg: OK
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | cpuconsumptiontime: 72327 s
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | nevents: 400
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | neventsw: 0
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | pid: 24923
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | pgrp: 24923
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | corecount: 8
[2025-05-26 16:59:40] 2025-05-26 12:54:34,993 | INFO     | event service: False
[2025-05-26 16:59:40] 2025-05-26 12:54:34,994 | INFO     | sizes: {0: 2392911, 1: 2393768, 10: 2393974, 12: 2394002, 19093: 2426021, 19096: 2434964, 19097: 2435148, 19177: 2435318}
[2025-05-26 16:59:40] 2025-05-26 12:54:34,994 | INFO     | --------------------------------------------------
[2025-05-26 16:59:40] 2025-05-26 12:54:34,994 | INFO     | 
[2025-05-26 16:59:40] 2025-05-26 12:54:34,994 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-05-26 16:59:40] 2025-05-26 12:54:35,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 16:59:40] 2025-05-26 12:54:35,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 16:59:40] 2025-05-26 12:54:35,310 | INFO     | job 6665739038 has completed (purged errors)
[2025-05-26 16:59:40] 2025-05-26 12:54:35,310 | INFO     | overall cleanup function is called
[2025-05-26 16:59:40] 2025-05-26 12:54:36,319 | INFO     | --- collectZombieJob: --- 10, [24923]
[2025-05-26 16:59:40] 2025-05-26 12:54:36,319 | INFO     | zombie collector waiting for pid 24923
[2025-05-26 16:59:40] 2025-05-26 12:54:36,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 16:59:40] 2025-05-26 12:54:36,319 | INFO     | collected zombie processes
[2025-05-26 16:59:40] 2025-05-26 12:54:36,319 | INFO     | will attempt to kill all subprocesses of pid=24923
[2025-05-26 16:59:40] 2025-05-26 12:54:36,449 | INFO     | process IDs to be killed: [24923] (in reverse order)
[2025-05-26 16:59:40] 2025-05-26 12:54:36,606 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 16:59:40] 2025-05-26 12:54:36,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 16:59:40] 2025-05-26 12:54:36,610 | INFO     | did not find any defunct processes belonging to 24923
[2025-05-26 16:59:40] 2025-05-26 12:54:36,613 | INFO     | did not find any defunct processes belonging to 24923
[2025-05-26 16:59:40] 2025-05-26 12:54:36,613 | INFO     | ready for new job
[2025-05-26 16:59:40] 2025-05-26 12:54:36,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 16:59:40] 2025-05-26 12:54:36,616 | INFO     | **************************************
[2025-05-26 16:59:40] 2025-05-26 12:54:36,616 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 16:59:40] 2025-05-26 12:54:36,616 | INFO     | **************************************
[2025-05-26 16:59:40] 2025-05-26 12:54:36,616 | INFO     | 
[2025-05-26 16:59:40] 2025-05-26 12:54:36,616 | INFO     | pilot is running in a VM
[2025-05-26 16:59:40] 2025-05-26 12:54:36,617 | INFO     | architecture information:
[2025-05-26 16:59:40] 2025-05-26 12:54:36,619 | INFO     | executing command: cat /etc/os-release
[2025-05-26 16:59:40] 2025-05-26 12:54:36,801 | INFO     | cat /etc/os-release:
[2025-05-26 16:59:40] NAME="CentOS Linux"
[2025-05-26 16:59:40] VERSION="7 (Core)"
[2025-05-26 16:59:40] ID="centos"
[2025-05-26 16:59:40] ID_LIKE="rhel fedora"
[2025-05-26 16:59:40] VERSION_ID="7"
[2025-05-26 16:59:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 16:59:40] ANSI_COLOR="0;31"
[2025-05-26 16:59:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 16:59:40] HOME_URL="https://www.centos.org/"
[2025-05-26 16:59:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 16:59:40] 
[2025-05-26 16:59:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 16:59:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 16:59:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 16:59:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 16:59:40] 
[2025-05-26 16:59:40] 2025-05-26 12:54:36,801 | INFO     | **************************************
[2025-05-26 16:59:40] 2025-05-26 12:54:37,305 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-05-26 16:59:40] 2025-05-26 12:54:37,515 | INFO     | sufficient remaining disk space (492135514112 B)
[2025-05-26 16:59:40] 2025-05-26 12:54:37,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 16:59:40] 2025-05-26 12:54:37,516 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 16:59:40] 2025-05-26 12:54:37,516 | INFO     | update_server=False
[2025-05-26 16:59:40] 2025-05-26 12:54:37,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 16:59:40] 2025-05-26 12:54:37,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 16:59:40] 2025-05-26 12:54:37,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 16:59:40] 2025-05-26 12:54:37,526 | INFO     | aborting loop
[2025-05-26 16:59:40] 2025-05-26 12:54:37,894 | INFO     | all data control threads have been joined
[2025-05-26 16:59:40] 2025-05-26 12:54:37,929 | INFO     | PID=18362 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-26 16:59:40] 2025-05-26 12:54:37,929 | INFO     | .. there are 9 such processes running
[2025-05-26 16:59:40] 2025-05-26 12:54:37,929 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 16:59:40] 2025-05-26 12:54:37,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 16:59:40] 2025-05-26 12:54:37,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 16:59:40] 2025-05-26 12:54:38,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 16:59:40] 2025-05-26 12:54:38,145 | INFO     | all payload control threads have been joined
[2025-05-26 16:59:40] 2025-05-26 12:54:38,522 | INFO     | [job] retrieve thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:38,532 | INFO     | [job] job monitor thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:38,652 | INFO     | [job] validate thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:38,840 | INFO     | [payload] validate_post thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:38,841 | INFO     | [data] copytool_in thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:38,862 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:38,900 | INFO     | [data] control thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:38,952 | INFO     | all job control threads have been joined
[2025-05-26 16:59:40] 2025-05-26 12:54:39,148 | INFO     | [payload] failed_post thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:39,151 | INFO     | [payload] control thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:39,163 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:39,361 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:39,528 | INFO     | [data] copytool_out thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:39,959 | INFO     | [job] control thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:40,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 16:59:40] 2025-05-26 12:54:41,011 | INFO     | [job] queue monitor thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:42,036 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:48,162 | INFO     | job.realtimelogging is not enabled
[2025-05-26 16:59:40] 2025-05-26 12:54:49,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 16:59:40] 2025-05-26 12:54:50,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140235050190656)>', '<ExcThread(monitor, started 140234096371456)>']
[2025-05-26 16:59:40] 2025-05-26 12:54:51,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 16:59:40] 2025-05-26 12:54:51,005 | INFO     | [monitor] control thread has ended
[2025-05-26 16:59:40] 2025-05-26 12:54:55,599 | INFO     | all workflow threads have been joined
[2025-05-26 16:59:40] 2025-05-26 12:54:55,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 16:59:40] 2025-05-26 12:54:55,599 | INFO     | traces error code: 0
[2025-05-26 16:59:40] 2025-05-26 12:54:55,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 16:59:40] 2025-05-26 12:54:55,822 [wrapper] ==== pilot stdout END ====
[2025-05-26 16:59:40] 2025-05-26 12:54:55,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 16:59:40] 2025-05-26 12:54:55,947 [wrapper] pilotpid: 18362
[2025-05-26 16:59:40] 2025-05-26 12:54:56,059 [wrapper] Pilot exit status: 0
[2025-05-26 16:59:40] 2025-05-26 12:54:56,516 [wrapper] pandaids: 6665739038
[2025-05-26 16:59:40] 2025-05-26 12:54:57,539 [wrapper] cleanup supervisor_pilot  6133 18363
[2025-05-26 16:59:40] 2025-05-26 12:54:57,628 [wrapper] Test setup, not cleaning
[2025-05-26 16:59:40] 2025-05-26 12:54:57,761 [wrapper] apfmon messages muted
[2025-05-26 16:59:40] 2025-05-26 12:54:57,858 [wrapper] ==== wrapper stdout END ====
[2025-05-26 16:59:40] 2025-05-26 12:54:57,965 [wrapper] ==== wrapper stderr END ====
[2025-05-26 16:59:40]  *** Error codes and diagnostics ***
[2025-05-26 16:59:40]     "exeErrorCode": 0,
[2025-05-26 16:59:40]     "exeErrorDiag": "",
[2025-05-26 16:59:40]     "pilotErrorCode": 0,
[2025-05-26 16:59:40]     "pilotErrorDiag": "",
[2025-05-26 16:59:40]  *** Listing of results directory ***
[2025-05-26 16:59:40] total 419972
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc    495897 May 25 20:30 pilot3.tar.gz
[2025-05-26 16:59:40] -rwx------. 1 boinc boinc     37140 May 25 20:48 runpilot2-wrapper.sh
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc      5111 May 25 20:48 queuedata.json
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc       100 May 26 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 16:59:40] -rwxr-xr-x. 1 boinc boinc      7986 May 26 09:31 run_atlas
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc       105 May 26 09:31 job.xml
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc      6371 May 26 09:31 init_data.xml
[2025-05-26 16:59:40] -rw-r--r--. 2 boinc boinc 223476167 May 26 09:31 EVNT.44871834._001559.pool.root.1
[2025-05-26 16:59:40] -rw-r--r--. 2 boinc boinc     15093 May 26 09:31 start_atlas.sh
[2025-05-26 16:59:40] drwxrwx--x. 2 boinc boinc        68 May 26 09:31 shared
[2025-05-26 16:59:40] -rw-r--r--. 2 boinc boinc    508871 May 26 09:31 input.tar.gz
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc         0 May 26 09:31 boinc_lockfile
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc      2558 May 26 09:31 pandaJob.out
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc    990811 May 26 09:34 agis_schedconf.cvmfs.json
[2025-05-26 16:59:40] drwx------. 4 boinc boinc      4096 May 26 09:34 pilot3
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc 198636778 May 26 14:51 HITS.44871837._039074.pool.root.1
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc       531 May 26 14:51 boinc_task_state.xml
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc      1017 May 26 14:53 memory_monitor_summary.json
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc   1596740 May 26 14:53 agis_ddmendpoints.agis.ALL.json
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc    416360 May 26 14:53 log.44871837._039074.job.log.tgz.1
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc        95 May 26 14:54 pilot_heartbeat.json
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc      7687 May 26 14:54 heartbeat.json
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc      4881 May 26 14:54 pilotlog.txt
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc   1645158 May 26 14:54 log.44871837._039074.job.log.1
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc       357 May 26 14:54 output.list
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc       620 May 26 14:54 runtime_log
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc   2078720 May 26 14:54 result.tar.gz
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc      8673 May 26 14:54 runtime_log.err
[2025-05-26 16:59:40] -rw-------. 1 boinc boinc       658 May 26 14:54 HugMDmoZVd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6sUKDm4TJQUo.diag
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc      8192 May 26 16:59 boinc_mmap_file
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc        28 May 26 16:59 wrapper_checkpoint.txt
[2025-05-26 16:59:40] -rw-r--r--. 1 boinc boinc     20535 May 26 16:59 stderr.txt
[2025-05-26 16:59:41] HITS file was successfully produced:
[2025-05-26 16:59:41] -rw-------. 1 boinc boinc 198636778 May 26 14:51 shared/HITS.pool.root.1
[2025-05-26 16:59:41]  *** Contents of shared directory: ***
[2025-05-26 16:59:41] total 414772
[2025-05-26 16:59:41] -rw-r--r--. 2 boinc boinc 223476167 May 26 09:31 ATLAS.root_0
[2025-05-26 16:59:41] -rw-r--r--. 2 boinc boinc     15093 May 26 09:31 start_atlas.sh
[2025-05-26 16:59:41] -rw-r--r--. 2 boinc boinc    508871 May 26 09:31 input.tar.gz
[2025-05-26 16:59:41] -rw-------. 1 boinc boinc 198636778 May 26 14:51 HITS.pool.root.1
[2025-05-26 16:59:41] -rw-------. 1 boinc boinc   2078720 May 26 14:54 result.tar.gz
16:59:42 (12305): run_atlas exited; CPU time 72596.341788
16:59:42 (12305): called boinc_finish(0)

</stderr_txt>
]]>

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