Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:18:43 (477206): wrapper (7.7.26015): starting
13:18:43 (477206): wrapper: running run_atlas (--nthreads 4)
[2025-05-26 13:18:43] Arguments: --nthreads 4
[2025-05-26 13:18:43] Threads: 4
[2025-05-26 13:18:43] Checking for CVMFS
[2025-05-26 13:18:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 13:18:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 13:18:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 13:18:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 13:18:44] 2.9.2.0 2960 1641 87120 146436 2 55 24201371 36864000 0 130560 0 1246944 99.991 393248 13669 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-26 13:18:44] CVMFS is ok
[2025-05-26 13:18:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 13:18:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 13:18:44] Further information can be found at the LHC@home message board.
[2025-05-26 13:18:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 13:18:44] Checking for apptainer binary...
[2025-05-26 13:18:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 13:18:44] Running /usr/bin/apptainer --version
[2025-05-26 13:18:44] apptainer version 1.3.6-6.1
[2025-05-26 13:18:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 13:18:44] cosA131b
[2025-05-26 13:18:44] apptainer works
[2025-05-26 13:18:44] Set ATHENA_PROC_NUMBER=4
[2025-05-26 13:18:44] Set ATHENA_CORE_NUMBER=4
[2025-05-26 13:18:44] Starting ATLAS job with PandaID=6665732466
[2025-05-26 13:18:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 14:48:06]  *** The last 200 lines of the pilot log: ***
[2025-05-26 14:48:06]  filetype=log
[2025-05-26 14:48:06]  guid=dfaa23a7-6428-437b-9422-12fcc5284fc9
[2025-05-26 14:48:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-26 14:48:06]  is_altstaged=None
[2025-05-26 14:48:06]  is_tar=False
[2025-05-26 14:48:06]  lfn=log.44871837._036396.job.log.tgz.1
[2025-05-26 14:48:06]  mtime=0
[2025-05-26 14:48:06]  protocol_id=None
[2025-05-26 14:48:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-26 14:48:06]  replicas=None
[2025-05-26 14:48:06]  scope=mc23_13p6TeV
[2025-05-26 14:48:06]  status=None
[2025-05-26 14:48:06]  status_code=0
[2025-05-26 14:48:06]  storage_token=
[2025-05-26 14:48:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6665732466/log.44871837._036396.job.log.tgz.1
[2025-05-26 14:48:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/2b/log.44871837._036396.job.log.tgz.1
[2025-05-26 14:48:06]  workdir=None
[2025-05-26 14:48:06] ]
[2025-05-26 14:48:06] 2025-05-26 12:47:40,510 | INFO     | transferring file log.44871837._036396.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6665732466/log.44871837._036396.job.log.tgz.1 to /local/data/boinc/
[2025-05-26 14:48:06] 2025-05-26 12:47:40,510 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6665732466/log.44871837._036396.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0363
[2025-05-26 14:48:06] 2025-05-26 12:47:40,530 | INFO     | adding to output.list: log.44871837._036396.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/2b/log.44871837._036396.job.log.tg
[2025-05-26 14:48:06] 2025-05-26 12:47:40,530 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-26 14:48:06] 2025-05-26 12:47:40,530 | INFO     | summary of transferred files:
[2025-05-26 14:48:06] 2025-05-26 12:47:40,530 | INFO     |  -- lfn=log.44871837._036396.job.log.tgz.1, status_code=0, status=transferred
[2025-05-26 14:48:06] 2025-05-26 12:47:40,530 | INFO     | stage-out finished correctly
[2025-05-26 14:48:06] 2025-05-26 12:47:41,391 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-26 14:48:06] 2025-05-26 12:47:41,841 | INFO     | job 6665732466 has state=finished
[2025-05-26 14:48:06] 2025-05-26 12:47:41,841 | INFO     | preparing for final server update for job 6665732466 in state='finished'
[2025-05-26 14:48:06] 2025-05-26 12:47:41,842 | INFO     | this job has now completed (state=finished)
[2025-05-26 14:48:06] 2025-05-26 12:47:41,842 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-26 14:48:06] 2025-05-26 12:47:41,842 | INFO     | log transfer has been attempted: DONE
[2025-05-26 14:48:06] 2025-05-26 12:47:41,842 | INFO     | job 6665732466 has finished - writing final server update
[2025-05-26 14:48:06] 2025-05-26 12:47:41,842 | INFO     | total number of processed events: 400 (read)
[2025-05-26 14:48:06] 2025-05-26 12:47:41,843 | INFO     | executing command: lscpu
[2025-05-26 14:48:06] 2025-05-26 12:47:41,865 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 14:48:06] 2025-05-26 12:47:42,515 | INFO     | monitor loop #410: job 0:6665732466 is in state 'finished'
[2025-05-26 14:48:06] 2025-05-26 12:47:42,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 14:48:06] 2025-05-26 12:47:43,085 | INFO     | PID=480918 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-26 14:48:06] 2025-05-26 12:47:45,019 | INFO     | monitor loop #411: job 0:6665732466 is in state 'finished'
[2025-05-26 14:48:06] 2025-05-26 12:47:45,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 14:48:06] 2025-05-26 12:47:46,886 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-26 14:48:06] 2025-05-26 12:47:46,886 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665732466/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 14:48:06] 2025-05-26 12:47:46,887 | INFO     | extracted standard info from prmon json
[2025-05-26 14:48:06] 2025-05-26 12:47:46,887 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 14:48:06] 2025-05-26 12:47:46,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 14:48:06] 2025-05-26 12:47:46,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 14:48:06] 2025-05-26 12:47:46,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 14:48:06] 2025-05-26 12:47:46,888 | INFO     | fitting pss+swap vs Time
[2025-05-26 14:48:06] 2025-05-26 12:47:46,888 | INFO     | sum of square deviations: 158737860.0
[2025-05-26 14:48:06] 2025-05-26 12:47:46,888 | INFO     | sum of deviations: -2461575669.5
[2025-05-26 14:48:06] 2025-05-26 12:47:46,888 | INFO     | mean x: 1748261070.5
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | mean y: 2438104.2625
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | -- intersect: 27113027317.67904
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | intersect: 27113027317.67904
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | chi2: 0.06408244096096757
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | -- intersect: 27113027317.67904
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | current memory leak: -15.51 B/s (using 80 data points, chi2=0.06)
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | ..............................
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . Timing measurements:
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . get job = 0 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . initial setup = 1 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . payload setup = 5 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . stage-in = 0 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . payload execution = 5305 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . stage-out = 0 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | . log creation = 0 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,889 | INFO     | ..............................
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | 
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | job summary report
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | --------------------------------------------------
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | PanDA job id: 6665732466
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | task id: 44871837
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | errors: (none)
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | pilot state: finished 
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | transexitcode: 0
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | exeerrorcode: 0
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | exeerrordiag: 
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | exitcode: 0
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | exitmsg: OK
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | cpuconsumptiontime: 20192 s
[2025-05-26 14:48:06] 2025-05-26 12:47:46,930 | INFO     | nevents: 400
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | neventsw: 0
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | pid: 487548
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | pgrp: 487548
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | corecount: 4
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | event service: False
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | sizes: {0: 2393744, 4: 2393950, 11: 2393978, 5314: 2429449, 5315: 2429449, 5321: 2429619}
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | --------------------------------------------------
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | 
[2025-05-26 14:48:06] 2025-05-26 12:47:46,931 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,951 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 14:48:06] 2025-05-26 12:47:46,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,951 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 14:48:06] 2025-05-26 12:47:46,951 | INFO     | job 6665732466 has completed (purged errors)
[2025-05-26 14:48:06] 2025-05-26 12:47:46,951 | INFO     | overall cleanup function is called
[2025-05-26 14:48:06] 2025-05-26 12:47:47,958 | INFO     | --- collectZombieJob: --- 10, [487548]
[2025-05-26 14:48:06] 2025-05-26 12:47:47,958 | INFO     | zombie collector waiting for pid 487548
[2025-05-26 14:48:06] 2025-05-26 12:47:47,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 14:48:06] 2025-05-26 12:47:47,958 | INFO     | collected zombie processes
[2025-05-26 14:48:06] 2025-05-26 12:47:47,958 | INFO     | will attempt to kill all subprocesses of pid=487548
[2025-05-26 14:48:06] 2025-05-26 12:47:48,004 | INFO     | process IDs to be killed: [487548] (in reverse order)
[2025-05-26 14:48:06] 2025-05-26 12:47:48,038 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 14:48:06] 2025-05-26 12:47:48,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 14:48:06] 2025-05-26 12:47:48,040 | INFO     | did not find any defunct processes belonging to 487548
[2025-05-26 14:48:06] 2025-05-26 12:47:48,041 | INFO     | did not find any defunct processes belonging to 487548
[2025-05-26 14:48:06] 2025-05-26 12:47:48,042 | INFO     | ready for new job
[2025-05-26 14:48:06] 2025-05-26 12:47:48,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 14:48:06] 2025-05-26 12:47:48,042 | INFO     | **************************************
[2025-05-26 14:48:06] 2025-05-26 12:47:48,042 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 14:48:06] 2025-05-26 12:47:48,042 | INFO     | **************************************
[2025-05-26 14:48:06] 2025-05-26 12:47:48,042 | INFO     | 
[2025-05-26 14:48:06] 2025-05-26 12:47:48,043 | INFO     | architecture information:
[2025-05-26 14:48:06] 2025-05-26 12:47:48,043 | INFO     | executing command: cat /etc/os-release
[2025-05-26 14:48:06] 2025-05-26 12:47:48,057 | INFO     | cat /etc/os-release:
[2025-05-26 14:48:06] NAME="CentOS Linux"
[2025-05-26 14:48:06] VERSION="7 (Core)"
[2025-05-26 14:48:06] ID="centos"
[2025-05-26 14:48:06] ID_LIKE="rhel fedora"
[2025-05-26 14:48:06] VERSION_ID="7"
[2025-05-26 14:48:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 14:48:06] ANSI_COLOR="0;31"
[2025-05-26 14:48:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 14:48:06] HOME_URL="https://www.centos.org/"
[2025-05-26 14:48:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 14:48:06] 
[2025-05-26 14:48:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 14:48:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 14:48:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 14:48:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 14:48:06] 
[2025-05-26 14:48:06] 2025-05-26 12:47:48,057 | INFO     | **************************************
[2025-05-26 14:48:06] 2025-05-26 12:47:48,561 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | INFO     | sufficient remaining disk space (331321704448 B)
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | INFO     | update_server=False
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | INFO     | aborting loop
[2025-05-26 14:48:06] 2025-05-26 12:47:48,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 14:48:06] 2025-05-26 12:47:48,665 | INFO     | all data control threads have been joined
[2025-05-26 14:48:06] 2025-05-26 12:47:49,102 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 14:48:06] 2025-05-26 12:47:49,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 14:48:06] 2025-05-26 12:47:49,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 14:48:06] 2025-05-26 12:47:49,540 | INFO     | all job control threads have been joined
[2025-05-26 14:48:06] 2025-05-26 12:47:49,586 | INFO     | [job] retrieve thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:49,586 | INFO     | [job] job monitor thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:49,586 | INFO     | [job] queue monitor thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:49,606 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:49,671 | INFO     | [data] control thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:49,946 | INFO     | [payload] failed_post thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:49,988 | INFO     | all payload control threads have been joined
[2025-05-26 14:48:06] 2025-05-26 12:47:50,122 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:50,288 | INFO     | [data] copytool_in thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:50,546 | INFO     | [job] control thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:50,586 | INFO     | [data] copytool_out thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:50,763 | INFO     | [payload] validate_post thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:50,897 | INFO     | [job] validate thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:50,976 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:50,994 | INFO     | [payload] control thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:51,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 14:48:06] 2025-05-26 12:47:55,949 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:47:59,094 | INFO     | job.realtimelogging is not enabled
[2025-05-26 14:48:06] 2025-05-26 12:48:00,100 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 14:48:06] 2025-05-26 12:48:01,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300481034048)>', '<ExcThread(monitor, started 140299837880064)>']
[2025-05-26 14:48:06] 2025-05-26 12:48:02,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 14:48:06] 2025-05-26 12:48:02,172 | INFO     | [monitor] control thread has ended
[2025-05-26 14:48:06] 2025-05-26 12:48:06,277 | INFO     | all workflow threads have been joined
[2025-05-26 14:48:06] 2025-05-26 12:48:06,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 14:48:06] 2025-05-26 12:48:06,278 | INFO     | traces error code: 0
[2025-05-26 14:48:06] 2025-05-26 12:48:06,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 14:48:06] 2025-05-26 12:48:06,361 [wrapper] ==== pilot stdout END ====
[2025-05-26 14:48:06] 2025-05-26 12:48:06,366 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 14:48:06] 2025-05-26 12:48:06,370 [wrapper] pilotpid: 480918
[2025-05-26 14:48:06] 2025-05-26 12:48:06,375 [wrapper] Pilot exit status: 0
[2025-05-26 14:48:06] 2025-05-26 12:48:06,388 [wrapper] pandaids: 6665732466
[2025-05-26 14:48:06] 2025-05-26 12:48:06,412 [wrapper] cleanup supervisor_pilot  499785 480919
[2025-05-26 14:48:06] 2025-05-26 12:48:06,415 [wrapper] Test setup, not cleaning
[2025-05-26 14:48:06] 2025-05-26 12:48:06,419 [wrapper] apfmon messages muted
[2025-05-26 14:48:06] 2025-05-26 12:48:06,424 [wrapper] ==== wrapper stdout END ====
[2025-05-26 14:48:06] 2025-05-26 12:48:06,428 [wrapper] ==== wrapper stderr END ====
[2025-05-26 14:48:06]  *** Error codes and diagnostics ***
[2025-05-26 14:48:06]     "exeErrorCode": 0,
[2025-05-26 14:48:06]     "exeErrorDiag": "",
[2025-05-26 14:48:06]     "pilotErrorCode": 0,
[2025-05-26 14:48:06]     "pilotErrorDiag": "",
[2025-05-26 14:48:06]  *** Listing of results directory ***
[2025-05-26 14:48:06] total 424156
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc    495897 May 25 16:50 pilot3.tar.gz
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc      5111 May 25 17:14 queuedata.json
[2025-05-26 14:48:06] -rwx------ 1 boinc boinc     37140 May 25 17:15 runpilot2-wrapper.sh
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc       100 May 26 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 14:48:06] -rwxr-xr-x 1 boinc boinc      7986 May 26 13:18 run_atlas
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc       105 May 26 13:18 job.xml
[2025-05-26 14:48:06] -rw-r--r-- 2 boinc boinc 226381566 May 26 13:18 EVNT.44871834._001451.pool.root.1
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc      6862 May 26 13:18 init_data.xml
[2025-05-26 14:48:06] drwxrwx--x 2 boinc boinc      4096 May 26 13:18 shared
[2025-05-26 14:48:06] -rw-r--r-- 2 boinc boinc    508880 May 26 13:18 input.tar.gz
[2025-05-26 14:48:06] -rw-r--r-- 2 boinc boinc     15093 May 26 13:18 start_atlas.sh
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc         0 May 26 13:18 boinc_lockfile
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc      2559 May 26 13:18 pandaJob.out
[2025-05-26 14:48:06] -rw------- 1 boinc boinc    990437 May 26 13:18 agis_schedconf.cvmfs.json
[2025-05-26 14:48:06] -rw------- 1 boinc boinc   1596740 May 26 13:18 agis_ddmendpoints.agis.ALL.json
[2025-05-26 14:48:06] drwx------ 4 boinc boinc      4096 May 26 13:18 pilot3
[2025-05-26 14:48:06] -rw------- 1 boinc boinc 202575984 May 26 14:47 HITS.44871837._036396.pool.root.1
[2025-05-26 14:48:06] -rw------- 1 boinc boinc        95 May 26 14:47 pilot_heartbeat.json
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc       529 May 26 14:47 boinc_task_state.xml
[2025-05-26 14:48:06] -rw------- 1 boinc boinc      1022 May 26 14:47 memory_monitor_summary.json
[2025-05-26 14:48:06] -rw------- 1 boinc boinc    262910 May 26 14:47 log.44871837._036396.job.log.tgz.1
[2025-05-26 14:48:06] -rw------- 1 boinc boinc      7662 May 26 14:47 heartbeat.json
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc      8192 May 26 14:47 boinc_mmap_file
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc        27 May 26 14:48 wrapper_checkpoint.txt
[2025-05-26 14:48:06] -rw------- 1 boinc boinc      4429 May 26 14:48 pilotlog.txt
[2025-05-26 14:48:06] -rw------- 1 boinc boinc    511960 May 26 14:48 log.44871837._036396.job.log.1
[2025-05-26 14:48:06] -rw------- 1 boinc boinc       357 May 26 14:48 output.list
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc       620 May 26 14:48 runtime_log
[2025-05-26 14:48:06] -rw------- 1 boinc boinc    788480 May 26 14:48 result.tar.gz
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc      8743 May 26 14:48 runtime_log.err
[2025-05-26 14:48:06] -rw------- 1 boinc boinc       660 May 26 14:48 FvMKDmrFSd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuSUKDmyeqKQm.diag
[2025-05-26 14:48:06] -rw-r--r-- 1 boinc boinc     21230 May 26 14:48 stderr.txt
[2025-05-26 14:48:06] HITS file was successfully produced:
[2025-05-26 14:48:06] -rw------- 1 boinc boinc 202575984 May 26 14:47 shared/HITS.pool.root.1
[2025-05-26 14:48:06]  *** Contents of shared directory: ***
[2025-05-26 14:48:06] total 420204
[2025-05-26 14:48:06] -rw-r--r-- 2 boinc boinc 226381566 May 26 13:18 ATLAS.root_0
[2025-05-26 14:48:06] -rw-r--r-- 2 boinc boinc    508880 May 26 13:18 input.tar.gz
[2025-05-26 14:48:06] -rw-r--r-- 2 boinc boinc     15093 May 26 13:18 start_atlas.sh
[2025-05-26 14:48:06] -rw------- 1 boinc boinc 202575984 May 26 14:47 HITS.pool.root.1
[2025-05-26 14:48:06] -rw------- 1 boinc boinc    788480 May 26 14:48 result.tar.gz
14:48:07 (477206): run_atlas exited; CPU time 20211.032575
14:48:07 (477206): called boinc_finish(0)

</stderr_txt>
]]>

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