Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:44 (317581): wrapper (7.7.26015): starting
19:58:44 (317581): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 19:58:44] Arguments: --nthreads 8
[2025-05-25 19:58:44] Threads: 8
[2025-05-25 19:58:44] Checking for CVMFS
[2025-05-25 19:58:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 19:58:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 19:58:46] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 19:58:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 19:58:47] 2.11.2.0 7109 15073 193092 146418 3 510 17354265 18432000 21509 130560 0 55556829 99.243 82023045 33172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 19:58:47] CVMFS is ok
[2025-05-25 19:58:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 19:58:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 19:58:47] Further information can be found at the LHC@home message board.
[2025-05-25 19:58:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 19:58:47] Checking for apptainer binary...
[2025-05-25 19:58:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 19:58:47] Running /usr/bin/apptainer --version
[2025-05-25 19:58:47] apptainer version 1.3.2-1.el7
[2025-05-25 19:58:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 19:58:58] c-211-35-2.aglt2.org
[2025-05-25 19:58:58] apptainer works
[2025-05-25 19:58:58] Set ATHENA_PROC_NUMBER=8
[2025-05-25 19:58:58] Set ATHENA_CORE_NUMBER=8
[2025-05-25 19:58:58] Starting ATLAS job with PandaID=6665734740
[2025-05-25 19:58:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 03:50:24]  *** The last 200 lines of the pilot log: ***
[2025-05-26 03:50:24] 2025-05-26 07:50:01,285 | INFO     | extracted standard info from prmon json
[2025-05-26 03:50:24] 2025-05-26 07:50:01,285 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 03:50:24] 2025-05-26 07:50:01,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 03:50:24] 2025-05-26 07:50:01,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 03:50:24] 2025-05-26 07:50:01,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 03:50:24] 2025-05-26 07:50:01,293 | INFO     | fitting pss+swap vs Time
[2025-05-26 03:50:24] 2025-05-26 07:50:01,294 | INFO     | sum of square deviations: 29595009283.877502
[2025-05-26 03:50:24] 2025-05-26 07:50:01,299 | INFO     | sum of deviations: 311514078055.44403
[2025-05-26 03:50:24] 2025-05-26 07:50:01,299 | INFO     | mean x: 1748231787.310722
[2025-05-26 03:50:24] 2025-05-26 07:50:01,299 | INFO     | mean y: 2431217.623632385
[2025-05-26 03:50:24] 2025-05-26 07:50:01,299 | INFO     | -- intersect: -18399279970.48545
[2025-05-26 03:50:24] 2025-05-26 07:50:01,299 | INFO     | intersect: -18399279970.48545
[2025-05-26 03:50:24] 2025-05-26 07:50:01,300 | INFO     | chi2: 9.513473960080583
[2025-05-26 03:50:24] 2025-05-26 07:50:01,301 | INFO     | sum of square deviations: 28634234578.389404
[2025-05-26 03:50:24] 2025-05-26 07:50:01,305 | INFO     | sum of deviations: 371062112121.72565
[2025-05-26 03:50:24] 2025-05-26 07:50:01,305 | INFO     | mean x: 1748231634.8141594
[2025-05-26 03:50:24] 2025-05-26 07:50:01,306 | INFO     | mean y: 2440602.6991150444
[2025-05-26 03:50:24] 2025-05-26 07:50:01,306 | INFO     | -- intersect: -22652347710.7885
[2025-05-26 03:50:24] 2025-05-26 07:50:01,306 | INFO     | intersect: -22652347710.7885
[2025-05-26 03:50:24] 2025-05-26 07:50:01,306 | INFO     | chi2: 7.8844595030869895
[2025-05-26 03:50:24] 2025-05-26 07:50:01,306 | INFO     | current chi2=7.8844595030869895 (change=17.123234518001407 %)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,307 | INFO     | right removable region: 451
[2025-05-26 03:50:24] 2025-05-26 07:50:01,307 | INFO     | sum of square deviations: 28634147958.389404
[2025-05-26 03:50:24] 2025-05-26 07:50:01,312 | INFO     | sum of deviations: 148892186145.88516
[2025-05-26 03:50:24] 2025-05-26 07:50:01,312 | INFO     | mean x: 1748231939.8141594
[2025-05-26 03:50:24] 2025-05-26 07:50:01,312 | INFO     | mean y: 2457022.2367256638
[2025-05-26 03:50:24] 2025-05-26 07:50:01,312 | INFO     | -- intersect: -9088020396.097912
[2025-05-26 03:50:24] 2025-05-26 07:50:01,312 | INFO     | intersect: -9088020396.097912
[2025-05-26 03:50:24] 2025-05-26 07:50:01,313 | INFO     | chi2: 4.587507188864752
[2025-05-26 03:50:24] 2025-05-26 07:50:01,313 | INFO     | current chi2=4.587507188864752 (change=51.778843268879946 %)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,314 | INFO     | sum of square deviations: 27694310282.89048
[2025-05-26 03:50:24] 2025-05-26 07:50:01,318 | INFO     | sum of deviations: 35214045778.885864
[2025-05-26 03:50:24] 2025-05-26 07:50:01,318 | INFO     | mean x: 1748232092.3176734
[2025-05-26 03:50:24] 2025-05-26 07:50:01,318 | INFO     | mean y: 2475441.697986577
[2025-05-26 03:50:24] 2025-05-26 07:50:01,318 | INFO     | -- intersect: -2220447761.73796
[2025-05-26 03:50:24] 2025-05-26 07:50:01,318 | INFO     | intersect: -2220447761.73796
[2025-05-26 03:50:24] 2025-05-26 07:50:01,319 | INFO     | chi2: 2.1876136869548906
[2025-05-26 03:50:24] 2025-05-26 07:50:01,319 | INFO     | current chi2=2.1876136869548906 (change=52.31367283162234 %)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,320 | INFO     | sum of square deviations: 26775263694.88008
[2025-05-26 03:50:24] 2025-05-26 07:50:01,324 | INFO     | sum of deviations: -6446844461.617687
[2025-05-26 03:50:24] 2025-05-26 07:50:01,325 | INFO     | mean x: 1748232244.821267
[2025-05-26 03:50:24] 2025-05-26 07:50:01,325 | INFO     | mean y: 2482349.8529411764
[2025-05-26 03:50:24] 2025-05-26 07:50:01,325 | INFO     | -- intersect: 423414949.94167835
[2025-05-26 03:50:24] 2025-05-26 07:50:01,325 | INFO     | intersect: 423414949.94167835
[2025-05-26 03:50:24] 2025-05-26 07:50:01,325 | INFO     | chi2: 1.8927777906901597
[2025-05-26 03:50:24] 2025-05-26 07:50:01,326 | INFO     | current chi2=1.8927777906901597 (change=13.47751195848184 %)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,326 | INFO     | left removable region: 30
[2025-05-26 03:50:24] 2025-05-26 07:50:01,326 | INFO     | sum of square deviations: 23137215487.444305
[2025-05-26 03:50:24] 2025-05-26 07:50:01,330 | INFO     | sum of deviations: 11900739266.527325
[2025-05-26 03:50:24] 2025-05-26 07:50:01,330 | INFO     | mean x: 1748232519.3325415
[2025-05-26 03:50:24] 2025-05-26 07:50:01,330 | INFO     | mean y: 2500105.5819477434
[2025-05-26 03:50:24] 2025-05-26 07:50:01,331 | INFO     | -- intersect: -896711789.6926153
[2025-05-26 03:50:24] 2025-05-26 07:50:01,331 | INFO     | intersect: -896711789.6926153
[2025-05-26 03:50:24] 2025-05-26 07:50:01,331 | INFO     | chi2: 0.016798297415667355
[2025-05-26 03:50:24] 2025-05-26 07:50:01,331 | INFO     | -- intersect: -896711789.6926153
[2025-05-26 03:50:24] 2025-05-26 07:50:01,331 | INFO     | current memory leak: 0.51 B/s (using 421 data points, chi2=0.02)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,332 | INFO     | ..............................
[2025-05-26 03:50:24] 2025-05-26 07:50:01,332 | INFO     | . Timing measurements:
[2025-05-26 03:50:24] 2025-05-26 07:50:01,332 | INFO     | . get job = 0 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,332 | INFO     | . initial setup = 4 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,333 | INFO     | . payload setup = 86 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,333 | INFO     | . stage-in = 0 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,333 | INFO     | . payload execution = 27938 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,333 | INFO     | . stage-out = 4 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,333 | INFO     | . log creation = 1 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,333 | INFO     | ..............................
[2025-05-26 03:50:24] 2025-05-26 07:50:01,427 | INFO     | 
[2025-05-26 03:50:24] 2025-05-26 07:50:01,427 | INFO     | job summary report
[2025-05-26 03:50:24] 2025-05-26 07:50:01,427 | INFO     | --------------------------------------------------
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | PanDA job id: 6665734740
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | task id: 44871837
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | errors: (none)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | pilot state: finished 
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | transexitcode: 0
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | exeerrorcode: 0
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | exeerrordiag: 
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | exitcode: 0
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | exitmsg: OK
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | cpuconsumptiontime: 57978 s
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | nevents: 400
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | neventsw: 0
[2025-05-26 03:50:24] 2025-05-26 07:50:01,428 | INFO     | pid: 27934
[2025-05-26 03:50:24] 2025-05-26 07:50:01,429 | INFO     | pgrp: 27934
[2025-05-26 03:50:24] 2025-05-26 07:50:01,429 | INFO     | corecount: 8
[2025-05-26 03:50:24] 2025-05-26 07:50:01,429 | INFO     | event service: False
[2025-05-26 03:50:24] 2025-05-26 07:50:01,429 | INFO     | sizes: {0: 2393513, 1: 2393712, 12: 2393712, 23: 2393740, 34: 2393768, 39: 2394002, 45: 2394158, 28029: 2430278, 28034: 2439219, 28037: 2439275, 28088: 2439445}
[2025-05-26 03:50:24] 2025-05-26 07:50:01,429 | INFO     | --------------------------------------------------
[2025-05-26 03:50:24] 2025-05-26 07:50:01,429 | INFO     | 
[2025-05-26 03:50:24] 2025-05-26 07:50:01,429 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-26 03:50:24] 2025-05-26 07:50:01,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,797 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 03:50:24] 2025-05-26 07:50:01,797 | INFO     | job 6665734740 has completed (purged errors)
[2025-05-26 03:50:24] 2025-05-26 07:50:01,797 | INFO     | overall cleanup function is called
[2025-05-26 03:50:24] 2025-05-26 07:50:02,822 | INFO     | --- collectZombieJob: --- 10, [27934]
[2025-05-26 03:50:24] 2025-05-26 07:50:02,822 | INFO     | zombie collector waiting for pid 27934
[2025-05-26 03:50:24] 2025-05-26 07:50:02,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 03:50:24] 2025-05-26 07:50:02,823 | INFO     | collected zombie processes
[2025-05-26 03:50:24] 2025-05-26 07:50:02,823 | INFO     | will attempt to kill all subprocesses of pid=27934
[2025-05-26 03:50:24] 2025-05-26 07:50:05,814 | INFO     | process IDs to be killed: [27934] (in reverse order)
[2025-05-26 03:50:24] 2025-05-26 07:50:06,001 | INFO     | PID=7210 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-26 03:50:24] 2025-05-26 07:50:06,001 | INFO     | .. there are 25 such processes running
[2025-05-26 03:50:24] 2025-05-26 07:50:06,458 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 03:50:24] 2025-05-26 07:50:06,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 03:50:24] 2025-05-26 07:50:06,478 | INFO     | did not find any defunct processes belonging to 27934
[2025-05-26 03:50:24] 2025-05-26 07:50:06,502 | INFO     | did not find any defunct processes belonging to 27934
[2025-05-26 03:50:24] 2025-05-26 07:50:06,502 | INFO     | ready for new job
[2025-05-26 03:50:24] 2025-05-26 07:50:06,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 03:50:24] 2025-05-26 07:50:06,508 | INFO     | **************************************
[2025-05-26 03:50:24] 2025-05-26 07:50:06,508 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 03:50:24] 2025-05-26 07:50:06,508 | INFO     | **************************************
[2025-05-26 03:50:24] 2025-05-26 07:50:06,508 | INFO     | 
[2025-05-26 03:50:24] 2025-05-26 07:50:06,517 | INFO     | architecture information:
[2025-05-26 03:50:24] 2025-05-26 07:50:06,529 | INFO     | executing command: cat /etc/os-release
[2025-05-26 03:50:24] 2025-05-26 07:50:06,670 | INFO     | cat /etc/os-release:
[2025-05-26 03:50:24] NAME="CentOS Linux"
[2025-05-26 03:50:24] VERSION="7 (Core)"
[2025-05-26 03:50:24] ID="centos"
[2025-05-26 03:50:24] ID_LIKE="rhel fedora"
[2025-05-26 03:50:24] VERSION_ID="7"
[2025-05-26 03:50:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 03:50:24] ANSI_COLOR="0;31"
[2025-05-26 03:50:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 03:50:24] HOME_URL="https://www.centos.org/"
[2025-05-26 03:50:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 03:50:24] 
[2025-05-26 03:50:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 03:50:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 03:50:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 03:50:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 03:50:24] 
[2025-05-26 03:50:24] 2025-05-26 07:50:06,670 | INFO     | **************************************
[2025-05-26 03:50:24] 2025-05-26 07:50:07,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-26 03:50:24] 2025-05-26 07:50:07,331 | INFO     | sufficient remaining disk space (104035516416 B)
[2025-05-26 03:50:24] 2025-05-26 07:50:07,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 03:50:24] 2025-05-26 07:50:07,332 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 03:50:24] 2025-05-26 07:50:07,332 | INFO     | update_server=False
[2025-05-26 03:50:24] 2025-05-26 07:50:07,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 03:50:24] 2025-05-26 07:50:07,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 03:50:24] 2025-05-26 07:50:07,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 03:50:24] 2025-05-26 07:50:07,379 | INFO     | aborting loop
[2025-05-26 03:50:24] 2025-05-26 07:50:07,553 | INFO     | all payload control threads have been joined
[2025-05-26 03:50:24] 2025-05-26 07:50:07,863 | INFO     | all data control threads have been joined
[2025-05-26 03:50:24] 2025-05-26 07:50:08,037 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 03:50:24] 2025-05-26 07:50:08,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 03:50:24] 2025-05-26 07:50:08,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 03:50:24] 2025-05-26 07:50:08,153 | INFO     | all job control threads have been joined
[2025-05-26 03:50:24] 2025-05-26 07:50:08,338 | INFO     | [job] retrieve thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:08,342 | INFO     | [job] queue monitor thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:08,384 | INFO     | [job] job monitor thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:08,425 | INFO     | [data] copytool_in thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:08,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:08,559 | INFO     | [payload] control thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:08,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 03:50:24] 2025-05-26 07:50:08,869 | INFO     | [data] control thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:09,019 | INFO     | [job] validate thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:09,162 | INFO     | [job] control thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:09,518 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:09,533 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:09,632 | INFO     | [payload] failed_post thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:09,633 | INFO     | [payload] validate_post thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:09,732 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:10,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 03:50:24] 2025-05-26 07:50:10,614 | INFO     | [data] copytool_out thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:14,545 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 03:50:24] 2025-05-26 07:50:15,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009869260608)>', '<ExcThread(monitor, started 140009206175488)>']
[2025-05-26 03:50:24] 2025-05-26 07:50:16,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 03:50:24] 2025-05-26 07:50:16,117 | INFO     | [monitor] control thread has ended
[2025-05-26 03:50:24] 2025-05-26 07:50:20,696 | INFO     | all workflow threads have been joined
[2025-05-26 03:50:24] 2025-05-26 07:50:20,696 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 03:50:24] 2025-05-26 07:50:20,697 | INFO     | traces error code: 0
[2025-05-26 03:50:24] 2025-05-26 07:50:20,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 03:50:24] 2025-05-26 07:50:22,154 [wrapper] ==== pilot stdout END ====
[2025-05-26 03:50:24] 2025-05-26 07:50:22,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 03:50:24] 2025-05-26 07:50:22,241 [wrapper] pilotpid: 7210
[2025-05-26 03:50:24] 2025-05-26 07:50:22,290 [wrapper] Pilot exit status: 0
[2025-05-26 03:50:24] 2025-05-26 07:50:22,425 [wrapper] pandaids: 6665734740
[2025-05-26 03:50:24] 2025-05-26 07:50:22,918 [wrapper] cleanup supervisor_pilot  61488 7211
[2025-05-26 03:50:24] 2025-05-26 07:50:22,949 [wrapper] Test setup, not cleaning
[2025-05-26 03:50:24] 2025-05-26 07:50:22,997 [wrapper] apfmon messages muted
[2025-05-26 03:50:24] 2025-05-26 07:50:23,041 [wrapper] ==== wrapper stdout END ====
[2025-05-26 03:50:24] 2025-05-26 07:50:23,080 [wrapper] ==== wrapper stderr END ====
[2025-05-26 03:50:24]  *** Error codes and diagnostics ***
[2025-05-26 03:50:24]     "exeErrorCode": 0,
[2025-05-26 03:50:24]     "exeErrorDiag": "",
[2025-05-26 03:50:24]     "pilotErrorCode": 0,
[2025-05-26 03:50:24]     "pilotErrorDiag": "",
[2025-05-26 03:50:24]  *** Listing of results directory ***
[2025-05-26 03:50:24] total 418704
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas    495897 May 25 11:56 pilot3.tar.gz
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas      5111 May 25 12:19 queuedata.json
[2025-05-26 03:50:24] -rwx------ 1 boincer umatlas     37140 May 25 12:21 runpilot2-wrapper.sh
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas       100 May 25 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 03:50:24] -rwxr-xr-x 1 boincer umatlas      7986 May 25 19:58 run_atlas
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas       105 May 25 19:58 job.xml
[2025-05-26 03:50:24] -rw-r--r-- 2 boincer umatlas 222141936 May 25 19:58 EVNT.44871834._001492.pool.root.1
[2025-05-26 03:50:24] -rw-r--r-- 2 boincer umatlas     15093 May 25 19:58 start_atlas.sh
[2025-05-26 03:50:24] drwxrwx--x 2 boincer umatlas      4096 May 25 19:58 shared
[2025-05-26 03:50:24] -rw-r--r-- 2 boincer umatlas    508880 May 25 19:58 input.tar.gz
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas         0 May 25 19:58 boinc_lockfile
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas      2555 May 25 19:58 pandaJob.out
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas    990795 May 25 20:00 agis_schedconf.cvmfs.json
[2025-05-26 03:50:24] drwx------ 4 boincer umatlas      4096 May 25 20:00 pilot3
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas 197309208 May 26 03:46 HITS.44871837._037397.pool.root.1
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas       531 May 26 03:47 boinc_task_state.xml
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas      6385 May 26 03:48 init_data.xml
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas      1068 May 26 03:48 memory_monitor_summary.json
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas   1596740 May 26 03:49 agis_ddmendpoints.agis.ALL.json
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas    499032 May 26 03:49 log.44871837._037397.job.log.tgz.1
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas        95 May 26 03:50 pilot_heartbeat.json
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas      7771 May 26 03:50 heartbeat.json
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas      8192 May 26 03:50 boinc_mmap_file
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas        28 May 26 03:50 wrapper_checkpoint.txt
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas      4354 May 26 03:50 pilotlog.txt
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas   2236558 May 26 03:50 log.44871837._037397.job.log.1
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas       357 May 26 03:50 output.list
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas       620 May 26 03:50 runtime_log
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas   2754560 May 26 03:50 result.tar.gz
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas      8670 May 26 03:50 runtime_log.err
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas       664 May 26 03:50 gFdLDmvHTd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvcUKDmtvZAxn.diag
[2025-05-26 03:50:24] -rw-r--r-- 1 boincer umatlas     20979 May 26 03:50 stderr.txt
[2025-05-26 03:50:24] HITS file was successfully produced:
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas 197309208 May 26 03:46 shared/HITS.pool.root.1
[2025-05-26 03:50:24]  *** Contents of shared directory: ***
[2025-05-26 03:50:24] total 412836
[2025-05-26 03:50:24] -rw-r--r-- 2 boincer umatlas 222141936 May 25 19:58 ATLAS.root_0
[2025-05-26 03:50:24] -rw-r--r-- 2 boincer umatlas     15093 May 25 19:58 start_atlas.sh
[2025-05-26 03:50:24] -rw-r--r-- 2 boincer umatlas    508880 May 25 19:58 input.tar.gz
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas 197309208 May 26 03:46 HITS.pool.root.1
[2025-05-26 03:50:24] -rw------- 1 boincer umatlas   2754560 May 26 03:50 result.tar.gz
03:50:25 (317581): run_atlas exited; CPU time 58988.109541
03:50:25 (317581): called boinc_finish(0)

</stderr_txt>
]]>

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