Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:04:08 (3836482): wrapper (7.7.26015): starting
20:04:08 (3836482): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 20:04:08] Arguments: --nthreads 8
[2025-05-25 20:04:08] Threads: 8
[2025-05-25 20:04:08] Checking for CVMFS
[2025-05-25 20:04:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 20:04:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 20:04:09] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 20:04:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 20:04:09] 2.12.6.0 1594372 9809 338700 146418 2 541 26820222 32935937 21693 16776704 0 66954374 99.539 76768561 23061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 20:04:09] CVMFS is ok
[2025-05-25 20:04:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 20:04:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 20:04:09] Further information can be found at the LHC@home message board.
[2025-05-25 20:04:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 20:04:09] Checking for apptainer binary...
[2025-05-25 20:04:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 20:04:09] Running /usr/bin/apptainer --version
[2025-05-25 20:04:09] apptainer version 1.4.1-1.el9
[2025-05-25 20:04:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 20:04:10] c7-4-31.aglt2.org
[2025-05-25 20:04:10] apptainer works
[2025-05-25 20:04:10] Set ATHENA_PROC_NUMBER=8
[2025-05-25 20:04:10] Set ATHENA_CORE_NUMBER=8
[2025-05-25 20:04:10] Starting ATLAS job with PandaID=6665737647
[2025-05-25 20:04:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 23:49:06]  *** The last 200 lines of the pilot log: ***
[2025-05-25 23:49:06] 2025-05-26 03:48:44,881 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665737647/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 23:49:06] 2025-05-26 03:48:44,882 | INFO     | extracted standard info from prmon json
[2025-05-25 23:49:06] 2025-05-26 03:48:44,882 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 23:49:06] 2025-05-26 03:48:44,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 23:49:06] 2025-05-26 03:48:44,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 23:49:06] 2025-05-26 03:48:44,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 23:49:06] 2025-05-26 03:48:44,913 | INFO     | fitting pss+swap vs Time
[2025-05-25 23:49:06] 2025-05-26 03:48:44,913 | INFO     | sum of square deviations: 3256841749.6803775
[2025-05-25 23:49:06] 2025-05-26 03:48:44,914 | INFO     | sum of deviations: 49549194008.575356
[2025-05-25 23:49:06] 2025-05-26 03:48:44,915 | INFO     | mean x: 1748224594.0776255
[2025-05-25 23:49:06] 2025-05-26 03:48:44,915 | INFO     | mean y: 2099096.2602739725
[2025-05-25 23:49:06] 2025-05-26 03:48:44,915 | INFO     | -- intersect: -26595177111.89944
[2025-05-25 23:49:06] 2025-05-26 03:48:44,915 | INFO     | intersect: -26595177111.89944
[2025-05-25 23:49:06] 2025-05-26 03:48:44,915 | INFO     | chi2: 2.39505154459984
[2025-05-25 23:49:06] 2025-05-26 03:48:44,915 | INFO     | sum of square deviations: 3038824242.149512
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | sum of deviations: 52391738854.56078
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | mean x: 1748224441.5794392
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | mean y: 2101041.6728971964
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | -- intersect: -30138674173.942196
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | intersect: -30138674173.942196
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | chi2: 2.348012470564636
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | current chi2=2.348012470564636 (change=1.9640109266651797 %)
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | right removable region: 213
[2025-05-25 23:49:06] 2025-05-26 03:48:44,925 | INFO     | sum of square deviations: 3038813872.149512
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | sum of deviations: 7689330186.542057
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | mean x: 1748224746.5794392
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | mean y: 2128219.35046729
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | -- intersect: -4421531103.760497
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | intersect: -4421531103.760497
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | chi2: 0.2210402570227514
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | current chi2=0.2210402570227514 (change=90.77096033606732 %)
[2025-05-25 23:49:06] 2025-05-26 03:48:44,927 | INFO     | sum of square deviations: 2830739669.6172223
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | sum of deviations: 1839134012.339711
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | mean x: 1748224899.0813396
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | mean y: 2132449.215311005
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | -- intersect: -1133690780.1791525
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | intersect: -1133690780.1791525
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | chi2: 0.13756230907382203
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | current chi2=0.13756230907382203 (change=37.76594773880357 %)
[2025-05-25 23:49:06] 2025-05-26 03:48:44,942 | INFO     | sum of square deviations: 2632386579.583331
[2025-05-25 23:49:06] 2025-05-26 03:48:44,943 | INFO     | sum of deviations: 1840682772.4166653
[2025-05-25 23:49:06] 2025-05-26 03:48:44,944 | INFO     | mean x: 1748225051.5833333
[2025-05-25 23:49:06] 2025-05-26 03:48:44,944 | INFO     | mean y: 2132456.3578431373
[2025-05-25 23:49:06] 2025-05-26 03:48:44,944 | INFO     | -- intersect: -1220304916.5245354
[2025-05-25 23:49:06] 2025-05-26 03:48:44,944 | INFO     | intersect: -1220304916.5245354
[2025-05-25 23:49:06] 2025-05-26 03:48:44,944 | INFO     | chi2: 0.13620446304659914
[2025-05-25 23:49:06] 2025-05-26 03:48:44,944 | INFO     | current chi2=0.13620446304659914 (change=0.9870770826434777 %)
[2025-05-25 23:49:06] 2025-05-26 03:48:44,944 | INFO     | left removable region: 30
[2025-05-25 23:49:06] 2025-05-26 03:48:44,952 | INFO     | sum of square deviations: 1900222123.4207656
[2025-05-25 23:49:06] 2025-05-26 03:48:44,953 | INFO     | sum of deviations: 1816011064.8469934
[2025-05-25 23:49:06] 2025-05-26 03:48:44,953 | INFO     | mean x: 1748225326.0928962
[2025-05-25 23:49:06] 2025-05-26 03:48:44,953 | INFO     | mean y: 2137927.4207650274
[2025-05-25 23:49:06] 2025-05-26 03:48:44,954 | INFO     | -- intersect: -1668612295.355927
[2025-05-25 23:49:06] 2025-05-26 03:48:44,954 | INFO     | intersect: -1668612295.355927
[2025-05-25 23:49:06] 2025-05-26 03:48:44,954 | INFO     | chi2: 0.0840517393536675
[2025-05-25 23:49:06] 2025-05-26 03:48:44,954 | INFO     | -- intersect: -1668612295.355927
[2025-05-25 23:49:06] 2025-05-26 03:48:44,954 | INFO     | current memory leak: 0.96 B/s (using 183 data points, chi2=0.08)
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | ..............................
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . Timing measurements:
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . get job = 0 s
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . initial setup = 3 s
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . payload setup = 23 s
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . stage-in = 0 s
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . payload execution = 13368 s
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . stage-out = 3 s
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | . log creation = 0 s
[2025-05-25 23:49:06] 2025-05-26 03:48:44,955 | INFO     | ..............................
[2025-05-25 23:49:06] 2025-05-26 03:48:45,363 | INFO     | 
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | job summary report
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | --------------------------------------------------
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | PanDA job id: 6665737647
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | task id: 44871837
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | errors: (none)
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | pilot state: finished 
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | transexitcode: 0
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | exeerrorcode: 0
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | exeerrordiag: 
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | exitcode: 0
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | exitmsg: OK
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | cpuconsumptiontime: 41867 s
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | nevents: 400
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | neventsw: 0
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | pid: 3852416
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | pgrp: 3852416
[2025-05-25 23:49:06] 2025-05-26 03:48:45,364 | INFO     | corecount: 8
[2025-05-25 23:49:06] 2025-05-26 03:48:45,365 | INFO     | event service: False
[2025-05-25 23:49:06] 2025-05-26 03:48:45,365 | INFO     | sizes: {0: 2393570, 1: 2393769, 12: 2393769, 14: 2394003, 22: 2394031, 13393: 2424093, 13397: 2433034, 13399: 2433090, 13415: 2433260}
[2025-05-25 23:49:06] 2025-05-26 03:48:45,365 | INFO     | --------------------------------------------------
[2025-05-25 23:49:06] 2025-05-26 03:48:45,365 | INFO     | 
[2025-05-25 23:49:06] 2025-05-26 03:48:45,365 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 23:49:06] 2025-05-26 03:48:45,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 23:49:06] 2025-05-26 03:48:45,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 23:49:06] 2025-05-26 03:48:45,416 | INFO     | job 6665737647 has completed (purged errors)
[2025-05-25 23:49:06] 2025-05-26 03:48:45,416 | INFO     | overall cleanup function is called
[2025-05-25 23:49:06] 2025-05-26 03:48:46,441 | INFO     | --- collectZombieJob: --- 10, [3852416]
[2025-05-25 23:49:06] 2025-05-26 03:48:46,441 | INFO     | zombie collector waiting for pid 3852416
[2025-05-25 23:49:06] 2025-05-26 03:48:46,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 23:49:06] 2025-05-26 03:48:46,442 | INFO     | collected zombie processes
[2025-05-25 23:49:06] 2025-05-26 03:48:46,442 | INFO     | will attempt to kill all subprocesses of pid=3852416
[2025-05-25 23:49:06] 2025-05-26 03:48:47,278 | INFO     | process IDs to be killed: [3852416] (in reverse order)
[2025-05-25 23:49:06] 2025-05-26 03:48:47,686 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 23:49:06] 2025-05-26 03:48:47,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 23:49:06] 2025-05-26 03:48:47,766 | INFO     | did not find any defunct processes belonging to 3852416
[2025-05-25 23:49:06] 2025-05-26 03:48:47,798 | INFO     | did not find any defunct processes belonging to 3852416
[2025-05-25 23:49:06] 2025-05-26 03:48:47,799 | INFO     | ready for new job
[2025-05-25 23:49:06] 2025-05-26 03:48:47,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 23:49:06] 2025-05-26 03:48:47,801 | INFO     | **************************************
[2025-05-25 23:49:06] 2025-05-26 03:48:47,801 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 23:49:06] 2025-05-26 03:48:47,801 | INFO     | **************************************
[2025-05-25 23:49:06] 2025-05-26 03:48:47,801 | INFO     | 
[2025-05-25 23:49:06] 2025-05-26 03:48:47,819 | INFO     | architecture information:
[2025-05-25 23:49:06] 2025-05-26 03:48:47,823 | INFO     | executing command: cat /etc/os-release
[2025-05-25 23:49:06] 2025-05-26 03:48:47,962 | INFO     | cat /etc/os-release:
[2025-05-25 23:49:06] NAME="CentOS Linux"
[2025-05-25 23:49:06] VERSION="7 (Core)"
[2025-05-25 23:49:06] ID="centos"
[2025-05-25 23:49:06] ID_LIKE="rhel fedora"
[2025-05-25 23:49:06] VERSION_ID="7"
[2025-05-25 23:49:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 23:49:06] ANSI_COLOR="0;31"
[2025-05-25 23:49:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 23:49:06] HOME_URL="https://www.centos.org/"
[2025-05-25 23:49:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 23:49:06] 
[2025-05-25 23:49:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 23:49:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 23:49:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 23:49:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 23:49:06] 
[2025-05-25 23:49:06] 2025-05-26 03:48:47,963 | INFO     | **************************************
[2025-05-25 23:49:06] 2025-05-26 03:48:48,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 23:49:06] 2025-05-26 03:48:48,500 | INFO     | sufficient remaining disk space (73382494208 B)
[2025-05-25 23:49:06] 2025-05-26 03:48:48,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 23:49:06] 2025-05-26 03:48:48,500 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 23:49:06] 2025-05-26 03:48:48,500 | INFO     | update_server=False
[2025-05-25 23:49:06] 2025-05-26 03:48:48,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 23:49:06] 2025-05-26 03:48:48,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 23:49:06] 2025-05-26 03:48:48,759 | INFO     | all payload control threads have been joined
[2025-05-25 23:49:06] 2025-05-26 03:48:48,811 | INFO     | all data control threads have been joined
[2025-05-25 23:49:06] 2025-05-26 03:48:48,857 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 23:49:06] 2025-05-26 03:48:48,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 23:49:06] 2025-05-26 03:48:48,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 23:49:06] 2025-05-26 03:48:48,890 | INFO     | all job control threads have been joined
[2025-05-25 23:49:06] 2025-05-26 03:48:49,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 23:49:06] 2025-05-26 03:48:49,431 | INFO     | aborting loop
[2025-05-25 23:49:06] 2025-05-26 03:48:49,507 | INFO     | [job] retrieve thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,699 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,715 | INFO     | [payload] failed_post thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,765 | INFO     | [payload] control thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,792 | INFO     | [job] validate thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,817 | INFO     | [data] control thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,848 | INFO     | [payload] validate_post thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,903 | INFO     | [job] control thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:49,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 23:49:06] 2025-05-26 03:48:50,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 23:49:06] 2025-05-26 03:48:50,231 | INFO     | [data] copytool_in thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:50,263 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:50,443 | INFO     | [job] job monitor thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:50,953 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:51,081 | INFO     | [job] queue monitor thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:51,938 | INFO     | [data] copytool_out thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:52,515 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:48:58,754 | INFO     | job.realtimelogging is not enabled
[2025-05-25 23:49:06] 2025-05-26 03:48:59,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 23:49:06] 2025-05-26 03:49:00,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049451435840)>', '<ExcThread(monitor, started 140049177876224)>']
[2025-05-25 23:49:06] 2025-05-26 03:49:00,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 23:49:06] 2025-05-26 03:49:00,931 | INFO     | [monitor] control thread has ended
[2025-05-25 23:49:06] 2025-05-26 03:49:05,318 | INFO     | all workflow threads have been joined
[2025-05-25 23:49:06] 2025-05-26 03:49:05,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 23:49:06] 2025-05-26 03:49:05,319 | INFO     | traces error code: 0
[2025-05-25 23:49:06] 2025-05-26 03:49:05,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 23:49:06] 2025-05-26 03:49:05,503 [wrapper] ==== pilot stdout END ====
[2025-05-25 23:49:06] 2025-05-26 03:49:05,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 23:49:06] 2025-05-26 03:49:05,542 [wrapper] pilotpid: 3841129
[2025-05-25 23:49:06] 2025-05-26 03:49:05,603 [wrapper] Pilot exit status: 0
[2025-05-25 23:49:06] 2025-05-26 03:49:05,677 [wrapper] pandaids: 6665737647
[2025-05-25 23:49:06] 2025-05-26 03:49:05,778 [wrapper] cleanup supervisor_pilot 1216894 3841130
[2025-05-25 23:49:06] 2025-05-26 03:49:05,781 [wrapper] Test setup, not cleaning
[2025-05-25 23:49:06] 2025-05-26 03:49:05,784 [wrapper] apfmon messages muted
[2025-05-25 23:49:06] 2025-05-26 03:49:05,786 [wrapper] ==== wrapper stdout END ====
[2025-05-25 23:49:06] 2025-05-26 03:49:05,788 [wrapper] ==== wrapper stderr END ====
[2025-05-25 23:49:06]  *** Error codes and diagnostics ***
[2025-05-25 23:49:06]     "exeErrorCode": 0,
[2025-05-25 23:49:06]     "exeErrorDiag": "",
[2025-05-25 23:49:06]     "pilotErrorCode": 0,
[2025-05-25 23:49:06]     "pilotErrorDiag": "",
[2025-05-25 23:49:06]  *** Listing of results directory ***
[2025-05-25 23:49:06] total 423736
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas    495897 May 25 13:46 pilot3.tar.gz
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas      5111 May 25 14:05 queuedata.json
[2025-05-25 23:49:06] -rwx------. 1 boincer umatlas     37140 May 25 14:06 runpilot2-wrapper.sh
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas       100 May 25 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 23:49:06] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 20:04 run_atlas
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas       105 May 25 20:04 job.xml
[2025-05-25 23:49:06] -rw-r--r--. 2 boincer umatlas 224937227 May 25 20:04 EVNT.44871834._001537.pool.root.1
[2025-05-25 23:49:06] -rw-r--r--. 2 boincer umatlas     15093 May 25 20:04 start_atlas.sh
[2025-05-25 23:49:06] drwxrwx--x. 2 boincer umatlas      4096 May 25 20:04 shared
[2025-05-25 23:49:06] -rw-r--r--. 2 boincer umatlas    508877 May 25 20:04 input.tar.gz
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas         0 May 25 20:04 boinc_lockfile
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas      2559 May 25 20:04 pandaJob.out
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas    990795 May 25 20:04 agis_schedconf.cvmfs.json
[2025-05-25 23:49:06] drwx------. 4 boincer umatlas      4096 May 25 20:04 pilot3
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas      6934 May 25 23:45 init_data.xml
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas 202197113 May 25 23:47 HITS.44871837._038534.pool.root.1
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas       531 May 25 23:47 boinc_task_state.xml
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas      1035 May 25 23:48 memory_monitor_summary.json
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas   1596740 May 25 23:48 agis_ddmendpoints.agis.ALL.json
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas    378852 May 25 23:48 log.44871837._038534.job.log.tgz.1
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas        95 May 25 23:48 pilot_heartbeat.json
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas      7694 May 25 23:48 heartbeat.json
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas      8192 May 25 23:49 boinc_mmap_file
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas        28 May 25 23:49 wrapper_checkpoint.txt
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas      4425 May 25 23:49 pilotlog.txt
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas   1091515 May 25 23:49 log.44871837._038534.job.log.1
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas       357 May 25 23:49 output.list
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas       620 May 25 23:49 runtime_log
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas   1484800 May 25 23:49 result.tar.gz
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas      8655 May 25 23:49 runtime_log.err
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas       654 May 25 23:49 GIMNDmsuUd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmInUKDmJjODim.diag
[2025-05-25 23:49:06] -rw-r--r--. 1 boincer umatlas     20921 May 25 23:49 stderr.txt
[2025-05-25 23:49:06] HITS file was successfully produced:
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas 202197113 May 25 23:47 shared/HITS.pool.root.1
[2025-05-25 23:49:06]  *** Contents of shared directory: ***
[2025-05-25 23:49:06] total 419104
[2025-05-25 23:49:06] -rw-r--r--. 2 boincer umatlas 224937227 May 25 20:04 ATLAS.root_0
[2025-05-25 23:49:06] -rw-r--r--. 2 boincer umatlas     15093 May 25 20:04 start_atlas.sh
[2025-05-25 23:49:06] -rw-r--r--. 2 boincer umatlas    508877 May 25 20:04 input.tar.gz
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas 202197113 May 25 23:47 HITS.pool.root.1
[2025-05-25 23:49:06] -rw-------. 1 boincer umatlas   1484800 May 25 23:49 result.tar.gz
23:49:07 (3836482): run_atlas exited; CPU time 42318.543919
23:49:07 (3836482): called boinc_finish(0)

</stderr_txt>
]]>

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