Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:06:35 (4166754): wrapper (7.7.26015): starting
19:06:35 (4166754): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 19:06:35] Arguments: --nthreads 8
[2025-05-25 19:06:35] Threads: 8
[2025-05-25 19:06:35] Checking for CVMFS
[2025-05-25 19:06:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 19:06:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 19:06:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 19:06:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 19:06:36] 2.12.6.0 4868 23551 372216 146417 3 726 27080558 32935937 28975 16776704 0 203399089 99.673 176126857 21925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 19:06:36] CVMFS is ok
[2025-05-25 19:06:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 19:06:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 19:06:36] Further information can be found at the LHC@home message board.
[2025-05-25 19:06:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 19:06:36] Checking for apptainer binary...
[2025-05-25 19:06:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 19:06:36] Running /usr/bin/apptainer --version
[2025-05-25 19:06:36] apptainer version 1.4.1-1.el9
[2025-05-25 19:06:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 19:06:36] c7-3-34.aglt2.org
[2025-05-25 19:06:36] apptainer works
[2025-05-25 19:06:36] Set ATHENA_PROC_NUMBER=8
[2025-05-25 19:06:36] Set ATHENA_CORE_NUMBER=8
[2025-05-25 19:06:36] Starting ATLAS job with PandaID=6665719326
[2025-05-25 19:06:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 23:47:55]  *** The last 200 lines of the pilot log: ***
[2025-05-25 23:47:55] 2025-05-26 03:47:38,328 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 23:47:55] 2025-05-26 03:47:38,331 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665719326/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,332 | INFO     | extracted standard info from prmon json
[2025-05-25 23:47:55] 2025-05-26 03:47:38,332 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 23:47:55] 2025-05-26 03:47:38,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 23:47:55] 2025-05-26 03:47:38,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 23:47:55] 2025-05-26 03:47:38,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 23:47:55] 2025-05-26 03:47:38,348 | INFO     | fitting pss+swap vs Time
[2025-05-25 23:47:55] 2025-05-26 03:47:38,349 | INFO     | sum of square deviations: 6448660629.985444
[2025-05-25 23:47:55] 2025-05-26 03:47:38,351 | INFO     | sum of deviations: 85404775358.49454
[2025-05-25 23:47:55] 2025-05-26 03:47:38,351 | INFO     | mean x: 1748222837.0072727
[2025-05-25 23:47:55] 2025-05-26 03:47:38,351 | INFO     | mean y: 2167238.752727273
[2025-05-25 23:47:55] 2025-05-26 03:47:38,351 | INFO     | -- intersect: -23150947374.99198
[2025-05-25 23:47:55] 2025-05-26 03:47:38,351 | INFO     | intersect: -23150947374.99198
[2025-05-25 23:47:55] 2025-05-26 03:47:38,366 | INFO     | chi2: 2.3980872125963932
[2025-05-25 23:47:55] 2025-05-26 03:47:38,367 | INFO     | sum of square deviations: 6103268717.485222
[2025-05-25 23:47:55] 2025-05-26 03:47:38,368 | INFO     | sum of deviations: 87799925984.3741
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | mean x: 1748222684.5074074
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | mean y: 2168280.062962963
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | -- intersect: -25147276944.95401
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | intersect: -25147276944.95401
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | chi2: 2.372406109284548
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | current chi2=2.372406109284548 (change=1.0708994725859284 %)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | right removable region: 269
[2025-05-25 23:47:55] 2025-05-26 03:47:38,369 | INFO     | sum of square deviations: 6103267497.485222
[2025-05-25 23:47:55] 2025-05-26 03:47:38,371 | INFO     | sum of deviations: 31744164370.603695
[2025-05-25 23:47:55] 2025-05-26 03:47:38,371 | INFO     | mean x: 1748222989.5074074
[2025-05-25 23:47:55] 2025-05-26 03:47:38,371 | INFO     | mean y: 2190810.448148148
[2025-05-25 23:47:55] 2025-05-26 03:47:38,371 | INFO     | -- intersect: -9090623482.593689
[2025-05-25 23:47:55] 2025-05-26 03:47:38,371 | INFO     | intersect: -9090623482.593689
[2025-05-25 23:47:55] 2025-05-26 03:47:38,371 | INFO     | chi2: 0.17553401173683655
[2025-05-25 23:47:55] 2025-05-26 03:47:38,371 | INFO     | current chi2=0.17553401173683655 (change=92.680249041202 %)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,372 | INFO     | sum of square deviations: 5770432739.984867
[2025-05-25 23:47:55] 2025-05-26 03:47:38,373 | INFO     | sum of deviations: 23287905676.226418
[2025-05-25 23:47:55] 2025-05-26 03:47:38,373 | INFO     | mean x: 1748223142.0075471
[2025-05-25 23:47:55] 2025-05-26 03:47:38,373 | INFO     | mean y: 2194659.886792453
[2025-05-25 23:47:55] 2025-05-26 03:47:38,373 | INFO     | -- intersect: -7053161058.924463
[2025-05-25 23:47:55] 2025-05-26 03:47:38,373 | INFO     | intersect: -7053161058.924463
[2025-05-25 23:47:55] 2025-05-26 03:47:38,374 | INFO     | chi2: 0.1254100514445778
[2025-05-25 23:47:55] 2025-05-26 03:47:38,374 | INFO     | current chi2=0.1254100514445778 (change=28.555127178090935 %)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,374 | INFO     | sum of square deviations: 5449923794.984605
[2025-05-25 23:47:55] 2025-05-26 03:47:38,375 | INFO     | sum of deviations: 20870825068.400005
[2025-05-25 23:47:55] 2025-05-26 03:47:38,375 | INFO     | mean x: 1748223294.5076923
[2025-05-25 23:47:55] 2025-05-26 03:47:38,375 | INFO     | mean y: 2195811.55
[2025-05-25 23:47:55] 2025-05-26 03:47:38,375 | INFO     | -- intersect: -6692734967.803229
[2025-05-25 23:47:55] 2025-05-26 03:47:38,375 | INFO     | intersect: -6692734967.803229
[2025-05-25 23:47:55] 2025-05-26 03:47:38,376 | INFO     | chi2: 0.12270729080373216
[2025-05-25 23:47:55] 2025-05-26 03:47:38,376 | INFO     | current chi2=0.12270729080373216 (change=2.155138770547493 %)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,376 | INFO     | left removable region: 30
[2025-05-25 23:47:55] 2025-05-26 03:47:38,376 | INFO     | sum of square deviations: 4233151730.995816
[2025-05-25 23:47:55] 2025-05-26 03:47:38,377 | INFO     | sum of deviations: 17751158574.004192
[2025-05-25 23:47:55] 2025-05-26 03:47:38,377 | INFO     | mean x: 1748223569.004184
[2025-05-25 23:47:55] 2025-05-26 03:47:38,377 | INFO     | mean y: 2200653.9958158997
[2025-05-25 23:47:55] 2025-05-26 03:47:38,378 | INFO     | -- intersect: -7328742285.983459
[2025-05-25 23:47:55] 2025-05-26 03:47:38,378 | INFO     | intersect: -7328742285.983459
[2025-05-25 23:47:55] 2025-05-26 03:47:38,378 | INFO     | chi2: 0.08369932127931033
[2025-05-25 23:47:55] 2025-05-26 03:47:38,378 | INFO     | -- intersect: -7328742285.983459
[2025-05-25 23:47:55] 2025-05-26 03:47:38,378 | INFO     | current memory leak: 4.19 B/s (using 239 data points, chi2=0.08)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | ..............................
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . Timing measurements:
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . get job = 0 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . initial setup = 3 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . payload setup = 18 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . stage-in = 0 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . payload execution = 16761 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . stage-out = 3 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | . log creation = 0 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,379 | INFO     | ..............................
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | 
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | job summary report
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | --------------------------------------------------
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | PanDA job id: 6665719326
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | task id: 44871837
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | errors: (none)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | pilot state: finished 
[2025-05-25 23:47:55] 2025-05-26 03:47:38,480 | INFO     | transexitcode: 0
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | exeerrorcode: 0
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | exeerrordiag: 
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | exitcode: 0
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | exitmsg: OK
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | cpuconsumptiontime: 40406 s
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | nevents: 400
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | neventsw: 0
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | pid: 4185023
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | pgrp: 4185023
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | corecount: 8
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | event service: False
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | sizes: {0: 2393690, 1: 2393690, 12: 2393952, 22: 2393952, 16786: 2425175, 16787: 2425174, 16791: 2434299, 16794: 2434355, 16806: 2434525}
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | --------------------------------------------------
[2025-05-25 23:47:55] 2025-05-26 03:47:38,481 | INFO     | 
[2025-05-25 23:47:55] 2025-05-26 03:47:38,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | job 6665719326 has completed (purged errors)
[2025-05-25 23:47:55] 2025-05-26 03:47:38,671 | INFO     | overall cleanup function is called
[2025-05-25 23:47:55] 2025-05-26 03:47:39,698 | INFO     | --- collectZombieJob: --- 10, [4185023]
[2025-05-25 23:47:55] 2025-05-26 03:47:39,699 | INFO     | zombie collector waiting for pid 4185023
[2025-05-25 23:47:55] 2025-05-26 03:47:39,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 23:47:55] 2025-05-26 03:47:39,699 | INFO     | collected zombie processes
[2025-05-25 23:47:55] 2025-05-26 03:47:39,699 | INFO     | will attempt to kill all subprocesses of pid=4185023
[2025-05-25 23:47:55] 2025-05-26 03:47:41,786 | INFO     | process IDs to be killed: [4185023] (in reverse order)
[2025-05-25 23:47:55] 2025-05-26 03:47:42,088 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 23:47:55] 2025-05-26 03:47:42,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 23:47:55] 2025-05-26 03:47:42,108 | INFO     | did not find any defunct processes belonging to 4185023
[2025-05-25 23:47:55] 2025-05-26 03:47:42,127 | INFO     | did not find any defunct processes belonging to 4185023
[2025-05-25 23:47:55] 2025-05-26 03:47:42,127 | INFO     | ready for new job
[2025-05-25 23:47:55] 2025-05-26 03:47:42,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 23:47:55] 2025-05-26 03:47:42,130 | INFO     | **************************************
[2025-05-25 23:47:55] 2025-05-26 03:47:42,130 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 23:47:55] 2025-05-26 03:47:42,130 | INFO     | **************************************
[2025-05-25 23:47:55] 2025-05-26 03:47:42,130 | INFO     | 
[2025-05-25 23:47:55] 2025-05-26 03:47:42,151 | INFO     | architecture information:
[2025-05-25 23:47:55] 2025-05-26 03:47:42,156 | INFO     | executing command: cat /etc/os-release
[2025-05-25 23:47:55] 2025-05-26 03:47:42,208 | INFO     | cat /etc/os-release:
[2025-05-25 23:47:55] NAME="CentOS Linux"
[2025-05-25 23:47:55] VERSION="7 (Core)"
[2025-05-25 23:47:55] ID="centos"
[2025-05-25 23:47:55] ID_LIKE="rhel fedora"
[2025-05-25 23:47:55] VERSION_ID="7"
[2025-05-25 23:47:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 23:47:55] ANSI_COLOR="0;31"
[2025-05-25 23:47:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 23:47:55] HOME_URL="https://www.centos.org/"
[2025-05-25 23:47:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 23:47:55] 
[2025-05-25 23:47:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 23:47:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 23:47:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 23:47:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 23:47:55] 
[2025-05-25 23:47:55] 2025-05-26 03:47:42,210 | INFO     | **************************************
[2025-05-25 23:47:55] 2025-05-26 03:47:42,718 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 23:47:55] 2025-05-26 03:47:42,787 | INFO     | sufficient remaining disk space (73856450560 B)
[2025-05-25 23:47:55] 2025-05-26 03:47:42,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 23:47:55] 2025-05-26 03:47:42,787 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 23:47:55] 2025-05-26 03:47:42,787 | INFO     | update_server=False
[2025-05-25 23:47:55] 2025-05-26 03:47:42,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 23:47:55] 2025-05-26 03:47:42,842 | INFO     | all data control threads have been joined
[2025-05-25 23:47:55] 2025-05-26 03:47:43,025 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 23:47:55] 2025-05-26 03:47:43,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 23:47:55] 2025-05-26 03:47:43,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 23:47:55] 2025-05-26 03:47:43,310 | INFO     | all payload control threads have been joined
[2025-05-25 23:47:55] 2025-05-26 03:47:43,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 23:47:55] 2025-05-26 03:47:43,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 23:47:55] 2025-05-26 03:47:43,601 | INFO     | aborting loop
[2025-05-25 23:47:55] 2025-05-26 03:47:43,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 23:47:55] 2025-05-26 03:47:43,793 | INFO     | [job] retrieve thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:43,850 | INFO     | [data] control thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,099 | INFO     | [data] copytool_in thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,200 | INFO     | [payload] failed_post thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,262 | INFO     | all job control threads have been joined
[2025-05-25 23:47:55] 2025-05-26 03:47:44,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,316 | INFO     | [payload] control thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,428 | INFO     | [job] validate thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,429 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,606 | INFO     | [job] job monitor thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,612 | INFO     | [payload] validate_post thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:44,617 | INFO     | [job] queue monitor thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:45,173 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:45,185 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:45,268 | INFO     | [job] control thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:45,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 23:47:55] 2025-05-26 03:47:45,470 | INFO     | [data] copytool_out thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:49,358 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 23:47:55] 2025-05-26 03:47:49,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593411393344)>', '<ExcThread(monitor, started 140592910681856)>']
[2025-05-25 23:47:55] 2025-05-26 03:47:50,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 23:47:55] 2025-05-26 03:47:50,093 | INFO     | [monitor] control thread has ended
[2025-05-25 23:47:55] 2025-05-26 03:47:54,716 | INFO     | all workflow threads have been joined
[2025-05-25 23:47:55] 2025-05-26 03:47:54,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 23:47:55] 2025-05-26 03:47:54,717 | INFO     | traces error code: 0
[2025-05-25 23:47:55] 2025-05-26 03:47:54,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 23:47:55] 2025-05-26 03:47:55,251 [wrapper] ==== pilot stdout END ====
[2025-05-25 23:47:55] 2025-05-26 03:47:55,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 23:47:55] 2025-05-26 03:47:55,281 [wrapper] pilotpid: 4171139
[2025-05-25 23:47:55] 2025-05-26 03:47:55,283 [wrapper] Pilot exit status: 0
[2025-05-25 23:47:55] 2025-05-26 03:47:55,299 [wrapper] pandaids: 6665719326
[2025-05-25 23:47:55] 2025-05-26 03:47:55,408 [wrapper] cleanup supervisor_pilot 2998431 4171140
[2025-05-25 23:47:55] 2025-05-26 03:47:55,414 [wrapper] Test setup, not cleaning
[2025-05-25 23:47:55] 2025-05-26 03:47:55,450 [wrapper] apfmon messages muted
[2025-05-25 23:47:55] 2025-05-26 03:47:55,476 [wrapper] ==== wrapper stdout END ====
[2025-05-25 23:47:55] 2025-05-26 03:47:55,483 [wrapper] ==== wrapper stderr END ====
[2025-05-25 23:47:55]  *** Error codes and diagnostics ***
[2025-05-25 23:47:55]     "exeErrorCode": 0,
[2025-05-25 23:47:55]     "exeErrorDiag": "",
[2025-05-25 23:47:55]     "pilotErrorCode": 0,
[2025-05-25 23:47:55]     "pilotErrorDiag": "",
[2025-05-25 23:47:55]  *** Listing of results directory ***
[2025-05-25 23:47:55] total 421720
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas    495897 May 25 02:05 pilot3.tar.gz
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas      5111 May 25 02:11 queuedata.json
[2025-05-25 23:47:55] -rwx------. 1 boincer umatlas     37140 May 25 02:14 runpilot2-wrapper.sh
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas       100 May 25 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 23:47:55] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 19:06 run_atlas
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas       105 May 25 19:06 job.xml
[2025-05-25 23:47:55] -rw-r--r--. 2 boincer umatlas 226274181 May 25 19:06 EVNT.44871834._001210.pool.root.1
[2025-05-25 23:47:55] -rw-r--r--. 2 boincer umatlas     15093 May 25 19:06 start_atlas.sh
[2025-05-25 23:47:55] drwxrwx--x. 2 boincer umatlas      4096 May 25 19:06 shared
[2025-05-25 23:47:55] -rw-r--r--. 2 boincer umatlas    508876 May 25 19:06 input.tar.gz
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas         0 May 25 19:06 boinc_lockfile
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas      2558 May 25 19:06 pandaJob.out
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas    990803 May 25 19:06 agis_schedconf.cvmfs.json
[2025-05-25 23:47:55] drwx------. 4 boincer umatlas      4096 May 25 19:06 pilot3
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas      6933 May 25 23:46 init_data.xml
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas 198374316 May 25 23:46 HITS.44871837._030357.pool.root.1
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas       530 May 25 23:46 boinc_task_state.xml
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas        95 May 25 23:47 pilot_heartbeat.json
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas      1038 May 25 23:47 memory_monitor_summary.json
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas   1596740 May 25 23:47 agis_ddmendpoints.agis.ALL.json
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas    409370 May 25 23:47 log.44871837._030357.job.log.tgz.1
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas      7697 May 25 23:47 heartbeat.json
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas      8192 May 25 23:47 boinc_mmap_file
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas        28 May 25 23:47 wrapper_checkpoint.txt
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas      4353 May 25 23:47 pilotlog.txt
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas   1276338 May 25 23:47 log.44871837._030357.job.log.1
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas       357 May 25 23:47 output.list
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas       620 May 25 23:47 runtime_log
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas   1699840 May 25 23:47 result.tar.gz
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas      8655 May 25 23:47 runtime_log.err
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas       657 May 25 23:47 0F2KDmNoJd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjzNKDmmFz7Nn.diag
[2025-05-25 23:47:55] -rw-r--r--. 1 boincer umatlas     20907 May 25 23:47 stderr.txt
[2025-05-25 23:47:55] HITS file was successfully produced:
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas 198374316 May 25 23:46 shared/HITS.pool.root.1
[2025-05-25 23:47:55]  *** Contents of shared directory: ***
[2025-05-25 23:47:55] total 416880
[2025-05-25 23:47:55] -rw-r--r--. 2 boincer umatlas 226274181 May 25 19:06 ATLAS.root_0
[2025-05-25 23:47:55] -rw-r--r--. 2 boincer umatlas     15093 May 25 19:06 start_atlas.sh
[2025-05-25 23:47:55] -rw-r--r--. 2 boincer umatlas    508876 May 25 19:06 input.tar.gz
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas 198374316 May 25 23:46 HITS.pool.root.1
[2025-05-25 23:47:55] -rw-------. 1 boincer umatlas   1699840 May 25 23:47 result.tar.gz
23:47:57 (4166754): run_atlas exited; CPU time 41030.902553
23:47:57 (4166754): called boinc_finish(0)

</stderr_txt>
]]>

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