Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:59:37 (4169460): wrapper (7.7.26015): starting
18:59:37 (4169460): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 18:59:37] Arguments: --nthreads 8
[2025-05-25 18:59:37] Threads: 8
[2025-05-25 18:59:37] Checking for CVMFS
[2025-05-25 18:59:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 18:59:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 18:59:38] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 18:59:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 18:59:39] 2.12.6.0 46158 10002 180024 146417 2 749 34016831 40960000 28556 16776704 0 147360220 99.759 89268818 33247 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 18:59:39] CVMFS is ok
[2025-05-25 18:59:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 18:59:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 18:59:39] Further information can be found at the LHC@home message board.
[2025-05-25 18:59:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 18:59:39] Checking for apptainer binary...
[2025-05-25 18:59:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 18:59:39] Running /usr/bin/apptainer --version
[2025-05-25 18:59:39] apptainer version 1.4.1-1.el9
[2025-05-25 18:59:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 18:59:39] c8-6-11.aglt2.org
[2025-05-25 18:59:39] apptainer works
[2025-05-25 18:59:39] Set ATHENA_PROC_NUMBER=8
[2025-05-25 18:59:39] Set ATHENA_CORE_NUMBER=8
[2025-05-25 18:59:39] Starting ATLAS job with PandaID=6665731696
[2025-05-25 18:59:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 21:28:40]  *** The last 200 lines of the pilot log: ***
[2025-05-25 21:28:40] 2025-05-26 01:28:16,011 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6665731696/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,012 | INFO     | extracted standard info from prmon json
[2025-05-25 21:28:40] 2025-05-26 01:28:16,013 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 21:28:40] 2025-05-26 01:28:16,013 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 21:28:40] 2025-05-26 01:28:16,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 21:28:40] 2025-05-26 01:28:16,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 21:28:40] 2025-05-26 01:28:16,112 | INFO     | fitting pss+swap vs Time
[2025-05-25 21:28:40] 2025-05-26 01:28:16,113 | INFO     | sum of square deviations: 887834847.0492976
[2025-05-25 21:28:40] 2025-05-26 01:28:16,117 | INFO     | sum of deviations: 14710284269.676052
[2025-05-25 21:28:40] 2025-05-26 01:28:16,117 | INFO     | mean x: 1748218529.556338
[2025-05-25 21:28:40] 2025-05-26 01:28:16,117 | INFO     | mean y: 2416594.915492958
[2025-05-25 21:28:40] 2025-05-26 01:28:16,117 | INFO     | -- intersect: -28963321369.479656
[2025-05-25 21:28:40] 2025-05-26 01:28:16,117 | INFO     | intersect: -28963321369.479656
[2025-05-25 21:28:40] 2025-05-26 01:28:16,117 | INFO     | chi2: 2.314277103648923
[2025-05-25 21:28:40] 2025-05-26 01:28:16,117 | INFO     | sum of square deviations: 797305996.6423341
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | sum of deviations: 23590664910.182465
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | mean x: 1748218377.051095
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | mean y: 2431101.116788321
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | -- intersect: -51723799601.4175
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | intersect: -51723799601.4175
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | chi2: 1.534846424642567
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | current chi2=1.534846424642567 (change=33.679228722326584 %)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | sum of square deviations: 713157716.628787
[2025-05-25 21:28:40] 2025-05-26 01:28:16,118 | INFO     | sum of deviations: 22631558521.257584
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | mean x: 1748218224.5530303
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | mean y: 2429363.106060606
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | -- intersect: -55476046343.404816
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | intersect: -55476046343.404816
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | chi2: 1.5361722220910239
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | current chi2=1.5361722220910239 (change=-0.0863798115023524 %)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | right removable region: 131
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | sum of square deviations: 797309779.5328447
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | sum of deviations: -7295470272.883213
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | mean x: 1748218682.0583942
[2025-05-25 21:28:40] 2025-05-26 01:28:16,119 | INFO     | mean y: 2453106.98540146
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | -- intersect: 15998842155.328547
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | intersect: 15998842155.328547
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | chi2: 0.8256293968890359
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | current chi2=0.8256293968890359 (change=64.32452295417582 %)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | sum of square deviations: 713156924.5151502
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | sum of deviations: -7475861917.212121
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | mean x: 1748218834.560606
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | mean y: 2453359.1515151514
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | -- intersect: 18328633977.996433
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | intersect: 18328633977.996433
[2025-05-25 21:28:40] 2025-05-26 01:28:16,120 | INFO     | chi2: 0.8095013239105876
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | current chi2=0.8095013239105876 (change=1.953427656430203 %)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | left removable region: 20
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | sum of square deviations: 424053950.55855894
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | sum of deviations: 924288051.7117118
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | mean x: 1748218804.0630631
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | mean y: 2471208.6126126125
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | -- intersect: -3808029201.169771
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | intersect: -3808029201.169771
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | chi2: 0.00040004435266002554
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | -- intersect: -3808029201.169771
[2025-05-25 21:28:40] 2025-05-26 01:28:16,121 | INFO     | current memory leak: 2.18 B/s (using 111 data points, chi2=0.00)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | ..............................
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . Timing measurements:
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . get job = 0 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . initial setup = 7 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . payload setup = 57 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . stage-in = 0 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . payload execution = 8640 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . stage-out = 2 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | . log creation = 0 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,122 | INFO     | ..............................
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | 
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | job summary report
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | --------------------------------------------------
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | PanDA job id: 6665731696
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | task id: 44871837
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | errors: (none)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | pilot state: finished 
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | transexitcode: 0
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | exeerrorcode: 0
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | exeerrordiag: 
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | exitcode: 0
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | exitmsg: OK
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | cpuconsumptiontime: 29000 s
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | nevents: 400
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | neventsw: 0
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | pid: 148514
[2025-05-25 21:28:40] 2025-05-26 01:28:16,316 | INFO     | pgrp: 148514
[2025-05-25 21:28:40] 2025-05-26 01:28:16,317 | INFO     | corecount: 8
[2025-05-25 21:28:40] 2025-05-26 01:28:16,317 | INFO     | event service: False
[2025-05-25 21:28:40] 2025-05-26 01:28:16,317 | INFO     | sizes: {0: 2393514, 1: 2393769, 2: 2393769, 12: 2393797, 23: 2393825, 34: 2393853, 40: 2394215, 45: 2394243, 8702: 2422035, 8706: 2430976, 8707: 2431032, 8740: 243
[2025-05-25 21:28:40] 2025-05-26 01:28:16,317 | INFO     | --------------------------------------------------
[2025-05-25 21:28:40] 2025-05-26 01:28:16,317 | INFO     | 
[2025-05-25 21:28:40] 2025-05-26 01:28:16,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 21:28:40] 2025-05-26 01:28:16,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 21:28:40] 2025-05-26 01:28:16,465 | INFO     | job 6665731696 has completed (purged errors)
[2025-05-25 21:28:40] 2025-05-26 01:28:16,466 | INFO     | overall cleanup function is called
[2025-05-25 21:28:40] 2025-05-26 01:28:17,500 | INFO     | --- collectZombieJob: --- 10, [148514]
[2025-05-25 21:28:40] 2025-05-26 01:28:17,501 | INFO     | zombie collector waiting for pid 148514
[2025-05-25 21:28:40] 2025-05-26 01:28:17,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 21:28:40] 2025-05-26 01:28:17,501 | INFO     | collected zombie processes
[2025-05-25 21:28:40] 2025-05-26 01:28:17,501 | INFO     | will attempt to kill all subprocesses of pid=148514
[2025-05-25 21:28:40] 2025-05-26 01:28:19,327 | INFO     | process IDs to be killed: [148514] (in reverse order)
[2025-05-25 21:28:40] 2025-05-26 01:28:19,661 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 21:28:40] 2025-05-26 01:28:19,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 21:28:40] 2025-05-26 01:28:19,795 | INFO     | did not find any defunct processes belonging to 148514
[2025-05-25 21:28:40] 2025-05-26 01:28:19,946 | INFO     | did not find any defunct processes belonging to 148514
[2025-05-25 21:28:40] 2025-05-26 01:28:19,946 | INFO     | ready for new job
[2025-05-25 21:28:40] 2025-05-26 01:28:19,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 21:28:40] 2025-05-26 01:28:19,958 | INFO     | **************************************
[2025-05-25 21:28:40] 2025-05-26 01:28:19,958 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 21:28:40] 2025-05-26 01:28:19,958 | INFO     | **************************************
[2025-05-25 21:28:40] 2025-05-26 01:28:19,958 | INFO     | 
[2025-05-25 21:28:40] 2025-05-26 01:28:19,977 | INFO     | architecture information:
[2025-05-25 21:28:40] 2025-05-26 01:28:19,991 | INFO     | executing command: cat /etc/os-release
[2025-05-25 21:28:40] 2025-05-26 01:28:20,091 | INFO     | cat /etc/os-release:
[2025-05-25 21:28:40] NAME="CentOS Linux"
[2025-05-25 21:28:40] VERSION="7 (Core)"
[2025-05-25 21:28:40] ID="centos"
[2025-05-25 21:28:40] ID_LIKE="rhel fedora"
[2025-05-25 21:28:40] VERSION_ID="7"
[2025-05-25 21:28:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 21:28:40] ANSI_COLOR="0;31"
[2025-05-25 21:28:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 21:28:40] HOME_URL="https://www.centos.org/"
[2025-05-25 21:28:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 21:28:40] 
[2025-05-25 21:28:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 21:28:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 21:28:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 21:28:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 21:28:40] 
[2025-05-25 21:28:40] 2025-05-26 01:28:20,092 | INFO     | **************************************
[2025-05-25 21:28:40] 2025-05-26 01:28:20,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 21:28:40] 2025-05-26 01:28:20,641 | INFO     | sufficient remaining disk space (169505456128 B)
[2025-05-25 21:28:40] 2025-05-26 01:28:20,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 21:28:40] 2025-05-26 01:28:20,641 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 21:28:40] 2025-05-26 01:28:20,641 | INFO     | update_server=False
[2025-05-25 21:28:40] 2025-05-26 01:28:20,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 21:28:40] 2025-05-26 01:28:20,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:28:40] 2025-05-26 01:28:20,642 | INFO     | aborting loop
[2025-05-25 21:28:40] 2025-05-26 01:28:20,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 21:28:40] 2025-05-26 01:28:20,803 | INFO     | all job control threads have been joined
[2025-05-25 21:28:40] 2025-05-26 01:28:21,074 | INFO     | all data control threads have been joined
[2025-05-25 21:28:40] 2025-05-26 01:28:21,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 21:28:40] 2025-05-26 01:28:21,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:28:40] 2025-05-26 01:28:21,408 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 21:28:40] 2025-05-26 01:28:21,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 21:28:40] 2025-05-26 01:28:21,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 21:28:40] 2025-05-26 01:28:21,646 | INFO     | [job] retrieve thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:21,647 | INFO     | [job] job monitor thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:21,664 | INFO     | [payload] validate_post thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:21,683 | INFO     | [data] copytool_in thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:21,809 | INFO     | [job] control thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:21,821 | INFO     | all payload control threads have been joined
[2025-05-25 21:28:40] 2025-05-26 01:28:22,018 | INFO     | [payload] failed_post thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,080 | INFO     | [data] control thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,230 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,366 | INFO     | [job] validate thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,367 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,378 | INFO     | [job] queue monitor thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,652 | INFO     | [data] copytool_out thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,827 | INFO     | [payload] control thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:22,928 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:25,213 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:31,384 | INFO     | job.realtimelogging is not enabled
[2025-05-25 21:28:40] 2025-05-26 01:28:32,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 21:28:40] 2025-05-26 01:28:33,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140720242222912)>', '<ExcThread(monitor, started 140719754827520)>']
[2025-05-25 21:28:40] 2025-05-26 01:28:34,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 21:28:40] 2025-05-26 01:28:34,514 | INFO     | [monitor] control thread has ended
[2025-05-25 21:28:40] 2025-05-26 01:28:38,984 | INFO     | all workflow threads have been joined
[2025-05-25 21:28:40] 2025-05-26 01:28:38,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 21:28:40] 2025-05-26 01:28:38,985 | INFO     | traces error code: 0
[2025-05-25 21:28:40] 2025-05-26 01:28:38,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 21:28:40] 2025-05-26 01:28:39,353 [wrapper] ==== pilot stdout END ====
[2025-05-25 21:28:40] 2025-05-26 01:28:39,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 21:28:40] 2025-05-26 01:28:39,408 [wrapper] pilotpid: 23232
[2025-05-25 21:28:40] 2025-05-26 01:28:39,442 [wrapper] Pilot exit status: 0
[2025-05-25 21:28:40] 2025-05-26 01:28:39,578 [wrapper] pandaids: 6665731696
[2025-05-25 21:28:40] 2025-05-26 01:28:39,809 [wrapper] cleanup supervisor_pilot 3257859 23233
[2025-05-25 21:28:40] 2025-05-26 01:28:39,838 [wrapper] Test setup, not cleaning
[2025-05-25 21:28:40] 2025-05-26 01:28:39,884 [wrapper] apfmon messages muted
[2025-05-25 21:28:40] 2025-05-26 01:28:39,922 [wrapper] ==== wrapper stdout END ====
[2025-05-25 21:28:40] 2025-05-26 01:28:39,966 [wrapper] ==== wrapper stderr END ====
[2025-05-25 21:28:40]  *** Error codes and diagnostics ***
[2025-05-25 21:28:40]     "exeErrorCode": 0,
[2025-05-25 21:28:40]     "exeErrorDiag": "",
[2025-05-25 21:28:40]     "pilotErrorCode": 0,
[2025-05-25 21:28:40]     "pilotErrorDiag": "",
[2025-05-25 21:28:40]  *** Listing of results directory ***
[2025-05-25 21:28:40] total 425988
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas      5111 May 25 10:30 queuedata.json
[2025-05-25 21:28:40] -rwx------. 1 boincer umatlas     37140 May 25 10:32 runpilot2-wrapper.sh
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas    495897 May 25 10:32 pilot3.tar.gz
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas       100 May 25 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 21:28:40] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 18:59 run_atlas
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas       105 May 25 18:59 job.xml
[2025-05-25 21:28:40] -rw-r--r--. 2 boincer umatlas 226450741 May 25 18:59 EVNT.44871834._001433.pool.root.1
[2025-05-25 21:28:40] -rw-r--r--. 2 boincer umatlas     15093 May 25 18:59 start_atlas.sh
[2025-05-25 21:28:40] drwxrwx--x. 2 boincer umatlas      4096 May 25 18:59 shared
[2025-05-25 21:28:40] -rw-r--r--. 2 boincer umatlas    508872 May 25 18:59 input.tar.gz
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas         0 May 25 18:59 boinc_lockfile
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas      2559 May 25 18:59 pandaJob.out
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas    990803 May 25 19:00 agis_schedconf.cvmfs.json
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas   1596740 May 25 19:00 agis_ddmendpoints.agis.ALL.json
[2025-05-25 21:28:40] drwx------. 4 boincer umatlas      4096 May 25 19:01 pilot3
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas      7160 May 25 21:21 init_data.xml
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas 203834912 May 25 21:26 HITS.44871837._035938.pool.root.1
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas       529 May 25 21:26 boinc_task_state.xml
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas      1047 May 25 21:27 memory_monitor_summary.json
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas    344169 May 25 21:27 log.44871837._035938.job.log.tgz.1
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas        95 May 25 21:27 pilot_heartbeat.json
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas      7715 May 25 21:28 heartbeat.json
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas      4426 May 25 21:28 pilotlog.txt
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas      8192 May 25 21:28 boinc_mmap_file
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas        27 May 25 21:28 wrapper_checkpoint.txt
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas    706161 May 25 21:28 log.44871837._035938.job.log.1
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas       357 May 25 21:28 output.list
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas       620 May 25 21:28 runtime_log
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas   1064960 May 25 21:28 result.tar.gz
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas      8654 May 25 21:28 runtime_log.err
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas       656 May 25 21:28 JeVLDm2ZRd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2eOKDmUiboBo.diag
[2025-05-25 21:28:40] -rw-r--r--. 1 boincer umatlas     20930 May 25 21:28 stderr.txt
[2025-05-25 21:28:40] HITS file was successfully produced:
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas 203834912 May 25 21:26 shared/HITS.pool.root.1
[2025-05-25 21:28:40]  *** Contents of shared directory: ***
[2025-05-25 21:28:40] total 421764
[2025-05-25 21:28:40] -rw-r--r--. 2 boincer umatlas 226450741 May 25 18:59 ATLAS.root_0
[2025-05-25 21:28:40] -rw-r--r--. 2 boincer umatlas     15093 May 25 18:59 start_atlas.sh
[2025-05-25 21:28:40] -rw-r--r--. 2 boincer umatlas    508872 May 25 18:59 input.tar.gz
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas 203834912 May 25 21:26 HITS.pool.root.1
[2025-05-25 21:28:40] -rw-------. 1 boincer umatlas   1064960 May 25 21:28 result.tar.gz
21:28:42 (4169460): run_atlas exited; CPU time 29267.612421
21:28:42 (4169460): called boinc_finish(0)

</stderr_txt>
]]>

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