Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:51:43 (3336901): wrapper (7.7.26015): starting
18:51:43 (3336901): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 18:51:43] Arguments: --nthreads 8
[2025-05-25 18:51:43] Threads: 8
[2025-05-25 18:51:43] Checking for CVMFS
[2025-05-25 18:51:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 18:51:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 18:51:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 18:51:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 18:51:45] 2.12.6.0 7828 23533 481968 146417 1 673 32895943 32935936 24730 16776704 0 199789564 99.660 177815547 21623 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 18:51:45] CVMFS is ok
[2025-05-25 18:51:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 18:51:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 18:51:45] Further information can be found at the LHC@home message board.
[2025-05-25 18:51:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 18:51:45] Checking for apptainer binary...
[2025-05-25 18:51:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 18:51:45] Running /usr/bin/apptainer --version
[2025-05-25 18:51:45] apptainer version 1.4.1-1.el9
[2025-05-25 18:51:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 18:51:45] c7-3-29.aglt2.org
[2025-05-25 18:51:45] apptainer works
[2025-05-25 18:51:45] Set ATHENA_PROC_NUMBER=8
[2025-05-25 18:51:45] Set ATHENA_CORE_NUMBER=8
[2025-05-25 18:51:45] Starting ATLAS job with PandaID=6665726168
[2025-05-25 18:51:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 23:00:08]  *** The last 200 lines of the pilot log: ***
[2025-05-25 23:00:08] 2025-05-26 02:59:49,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 23:00:08] 2025-05-26 02:59:49,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 23:00:08] 2025-05-26 02:59:49,368 | INFO     | fitting pss+swap vs Time
[2025-05-25 23:00:08] 2025-05-26 02:59:49,368 | INFO     | sum of square deviations: 4394582550.50002
[2025-05-25 23:00:08] 2025-05-26 02:59:49,370 | INFO     | sum of deviations: 72025256692.45451
[2025-05-25 23:00:08] 2025-05-26 02:59:49,370 | INFO     | mean x: 1748220955.590909
[2025-05-25 23:00:08] 2025-05-26 02:59:49,370 | INFO     | mean y: 2190119.388429752
[2025-05-25 23:00:08] 2025-05-26 02:59:49,370 | INFO     | -- intersect: -28650375086.659748
[2025-05-25 23:00:08] 2025-05-26 02:59:49,370 | INFO     | intersect: -28650375086.659748
[2025-05-25 23:00:08] 2025-05-26 02:59:49,370 | INFO     | chi2: 2.336589922054427
[2025-05-25 23:00:08] 2025-05-26 02:59:49,370 | INFO     | sum of square deviations: 4127769739.139235
[2025-05-25 23:00:08] 2025-05-26 02:59:49,400 | INFO     | sum of deviations: 73042680052.5063
[2025-05-25 23:00:08] 2025-05-26 02:59:49,400 | INFO     | mean x: 1748220803.0886075
[2025-05-25 23:00:08] 2025-05-26 02:59:49,400 | INFO     | mean y: 2190676.594936709
[2025-05-25 23:00:08] 2025-05-26 02:59:49,400 | INFO     | -- intersect: -30933336460.57648
[2025-05-25 23:00:08] 2025-05-26 02:59:49,400 | INFO     | intersect: -30933336460.57648
[2025-05-25 23:00:08] 2025-05-26 02:59:49,401 | INFO     | chi2: 2.3109473952266755
[2025-05-25 23:00:08] 2025-05-26 02:59:49,401 | INFO     | current chi2=2.3109473952266755 (change=1.097433768147284 %)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,401 | INFO     | right removable region: 236
[2025-05-25 23:00:08] 2025-05-26 02:59:49,401 | INFO     | sum of square deviations: 4127770837.9578185
[2025-05-25 23:00:08] 2025-05-26 02:59:49,434 | INFO     | sum of deviations: 24593312509.367092
[2025-05-25 23:00:08] 2025-05-26 02:59:49,434 | INFO     | mean x: 1748221108.092827
[2025-05-25 23:00:08] 2025-05-26 02:59:49,434 | INFO     | mean y: 2217110.3924050634
[2025-05-25 23:00:08] 2025-05-26 02:59:49,434 | INFO     | -- intersect: -10413707061.422844
[2025-05-25 23:00:08] 2025-05-26 02:59:49,434 | INFO     | intersect: -10413707061.422844
[2025-05-25 23:00:08] 2025-05-26 02:59:49,434 | INFO     | chi2: 0.30320171042247046
[2025-05-25 23:00:08] 2025-05-26 02:59:49,434 | INFO     | current chi2=0.30320171042247046 (change=87.0237516835696 %)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,435 | INFO     | sum of square deviations: 3871982587.913776
[2025-05-25 23:00:08] 2025-05-26 02:59:49,436 | INFO     | sum of deviations: 10536180248.732756
[2025-05-25 23:00:08] 2025-05-26 02:59:49,436 | INFO     | mean x: 1748221260.5948277
[2025-05-25 23:00:08] 2025-05-26 02:59:49,436 | INFO     | mean y: 2225435.9439655175
[2025-05-25 23:00:08] 2025-05-26 02:59:49,436 | INFO     | -- intersect: -4754917422.546617
[2025-05-25 23:00:08] 2025-05-26 02:59:49,436 | INFO     | intersect: -4754917422.546617
[2025-05-25 23:00:08] 2025-05-26 02:59:49,437 | INFO     | chi2: 0.10153952990340671
[2025-05-25 23:00:08] 2025-05-26 02:59:49,437 | INFO     | current chi2=0.10153952990340671 (change=66.51089805465638 %)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,437 | INFO     | sum of square deviations: 3627013540.237887
[2025-05-25 23:00:08] 2025-05-26 02:59:49,465 | INFO     | monitor loop #893: job 0:6665726168 is in state 'finished'
[2025-05-25 23:00:08] 2025-05-26 02:59:49,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | sum of deviations: 11750819093.030834
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | mean x: 1748221413.0881057
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | mean y: 2224671.0484581497
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | -- intersect: -5661673004.506866
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | intersect: -5661673004.506866
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | chi2: 0.09663790607002679
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | current chi2=0.09663790607002679 (change=4.827306013769004 %)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,466 | INFO     | left removable region: 30
[2025-05-25 23:00:08] 2025-05-26 02:59:49,467 | INFO     | sum of square deviations: 2710617279.747588
[2025-05-25 23:00:08] 2025-05-26 02:59:49,490 | INFO     | sum of deviations: 13009256793.174753
[2025-05-25 23:00:08] 2025-05-26 02:59:49,490 | INFO     | mean x: 1748221687.592233
[2025-05-25 23:00:08] 2025-05-26 02:59:49,490 | INFO     | mean y: 2226849.359223301
[2025-05-25 23:00:08] 2025-05-26 02:59:49,490 | INFO     | -- intersect: -8388136864.179309
[2025-05-25 23:00:08] 2025-05-26 02:59:49,490 | INFO     | intersect: -8388136864.179309
[2025-05-25 23:00:08] 2025-05-26 02:59:49,491 | INFO     | chi2: 0.05075545064633304
[2025-05-25 23:00:08] 2025-05-26 02:59:49,491 | INFO     | -- intersect: -8388136864.179309
[2025-05-25 23:00:08] 2025-05-26 02:59:49,491 | INFO     | current memory leak: 4.80 B/s (using 206 data points, chi2=0.05)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | ..............................
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . Timing measurements:
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . get job = 0 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . initial setup = 2 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . payload setup = 20 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . stage-in = 0 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . payload execution = 14766 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . stage-out = 5 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | . log creation = 0 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,492 | INFO     | ..............................
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | 
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | job summary report
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | --------------------------------------------------
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | PanDA job id: 6665726168
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | task id: 44871837
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | errors: (none)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | pilot state: finished 
[2025-05-25 23:00:08] 2025-05-26 02:59:49,784 | INFO     | transexitcode: 0
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | exeerrorcode: 0
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | exeerrordiag: 
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | exitcode: 0
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | exitmsg: OK
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | cpuconsumptiontime: 38591 s
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | nevents: 400
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | neventsw: 0
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | pid: 3363698
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | pgrp: 3363698
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | corecount: 8
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | event service: False
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | sizes: {0: 2393568, 1: 2393767, 12: 2393767, 17: 2394001, 22: 2394029, 14792: 2424635, 14793: 2424762, 14799: 2433759, 14800: 2433815, 14817: 2433985}
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | --------------------------------------------------
[2025-05-25 23:00:08] 2025-05-26 02:59:49,785 | INFO     | 
[2025-05-25 23:00:08] 2025-05-26 02:59:49,786 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-25 23:00:08] 2025-05-26 02:59:49,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 23:00:08] 2025-05-26 02:59:49,889 | INFO     | job 6665726168 has completed (purged errors)
[2025-05-25 23:00:08] 2025-05-26 02:59:49,889 | INFO     | overall cleanup function is called
[2025-05-25 23:00:08] 2025-05-26 02:59:50,932 | INFO     | --- collectZombieJob: --- 10, [3363698]
[2025-05-25 23:00:08] 2025-05-26 02:59:50,932 | INFO     | zombie collector waiting for pid 3363698
[2025-05-25 23:00:08] 2025-05-26 02:59:50,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 23:00:08] 2025-05-26 02:59:50,932 | INFO     | collected zombie processes
[2025-05-25 23:00:08] 2025-05-26 02:59:50,932 | INFO     | will attempt to kill all subprocesses of pid=3363698
[2025-05-25 23:00:08] 2025-05-26 02:59:55,242 | INFO     | process IDs to be killed: [3363698] (in reverse order)
[2025-05-25 23:00:08] 2025-05-26 02:59:55,797 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 23:00:08] 2025-05-26 02:59:55,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 23:00:08] 2025-05-26 02:59:56,150 | INFO     | did not find any defunct processes belonging to 3363698
[2025-05-25 23:00:08] 2025-05-26 02:59:56,440 | INFO     | did not find any defunct processes belonging to 3363698
[2025-05-25 23:00:08] 2025-05-26 02:59:56,440 | INFO     | ready for new job
[2025-05-25 23:00:08] 2025-05-26 02:59:56,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 23:00:08] 2025-05-26 02:59:56,513 | INFO     | **************************************
[2025-05-25 23:00:08] 2025-05-26 02:59:56,513 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 23:00:08] 2025-05-26 02:59:56,513 | INFO     | **************************************
[2025-05-25 23:00:08] 2025-05-26 02:59:56,513 | INFO     | 
[2025-05-25 23:00:08] 2025-05-26 02:59:56,692 | INFO     | architecture information:
[2025-05-25 23:00:08] 2025-05-26 02:59:56,709 | INFO     | executing command: cat /etc/os-release
[2025-05-25 23:00:08] 2025-05-26 02:59:56,763 | INFO     | PID=3349225 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 23:00:08] 2025-05-26 02:59:56,763 | INFO     | .. there are 37 such processes running
[2025-05-25 23:00:08] 2025-05-26 02:59:56,774 | INFO     | cat /etc/os-release:
[2025-05-25 23:00:08] NAME="CentOS Linux"
[2025-05-25 23:00:08] VERSION="7 (Core)"
[2025-05-25 23:00:08] ID="centos"
[2025-05-25 23:00:08] ID_LIKE="rhel fedora"
[2025-05-25 23:00:08] VERSION_ID="7"
[2025-05-25 23:00:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 23:00:08] ANSI_COLOR="0;31"
[2025-05-25 23:00:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 23:00:08] HOME_URL="https://www.centos.org/"
[2025-05-25 23:00:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 23:00:08] 
[2025-05-25 23:00:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 23:00:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 23:00:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 23:00:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 23:00:08] 
[2025-05-25 23:00:08] 2025-05-26 02:59:56,774 | INFO     | **************************************
[2025-05-25 23:00:08] 2025-05-26 02:59:57,278 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-25 23:00:08] 2025-05-26 02:59:57,345 | INFO     | sufficient remaining disk space (74069311488 B)
[2025-05-25 23:00:08] 2025-05-26 02:59:57,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 23:00:08] 2025-05-26 02:59:57,345 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 23:00:08] 2025-05-26 02:59:57,345 | INFO     | update_server=False
[2025-05-25 23:00:08] 2025-05-26 02:59:57,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 23:00:08] 2025-05-26 02:59:57,347 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 23:00:08] 2025-05-26 02:59:57,347 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 23:00:08] 2025-05-26 02:59:57,347 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 23:00:08] 2025-05-26 02:59:57,347 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 23:00:08] 2025-05-26 02:59:57,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 23:00:08] 2025-05-26 02:59:57,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 23:00:08] 2025-05-26 02:59:57,931 | INFO     | all payload control threads have been joined
[2025-05-25 23:00:08] 2025-05-26 02:59:58,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 23:00:08] 2025-05-26 02:59:58,173 | INFO     | aborting loop
[2025-05-25 23:00:08] 2025-05-26 02:59:58,285 | INFO     | all job control threads have been joined
[2025-05-25 23:00:08] 2025-05-26 02:59:58,352 | INFO     | [job] retrieve thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:58,386 | INFO     | all data control threads have been joined
[2025-05-25 23:00:08] 2025-05-26 02:59:58,618 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:58,618 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:58,624 | INFO     | [job] validate thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:58,936 | INFO     | [data] copytool_in thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:58,939 | INFO     | [payload] control thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 23:00:08] 2025-05-26 02:59:59,179 | INFO     | [job] job monitor thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,291 | INFO     | [job] control thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,354 | INFO     | [payload] failed_post thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,394 | INFO     | [data] control thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,596 | INFO     | [data] copytool_out thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,847 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 23:00:08] 2025-05-26 02:59:59,949 | INFO     | [payload] validate_post thread has finished
[2025-05-25 23:00:08] 2025-05-26 03:00:00,090 | INFO     | [job] queue monitor thread has finished
[2025-05-25 23:00:08] 2025-05-26 03:00:01,372 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 23:00:08] 2025-05-26 03:00:02,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618294339392)>', '<ExcThread(monitor, started 140617917110016)>']
[2025-05-25 23:00:08] 2025-05-26 03:00:03,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 23:00:08] 2025-05-26 03:00:03,412 | INFO     | [monitor] control thread has ended
[2025-05-25 23:00:08] 2025-05-26 03:00:07,486 | INFO     | all workflow threads have been joined
[2025-05-25 23:00:08] 2025-05-26 03:00:07,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 23:00:08] 2025-05-26 03:00:07,486 | INFO     | traces error code: 0
[2025-05-25 23:00:08] 2025-05-26 03:00:07,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 23:00:08] 2025-05-26 03:00:08,258 [wrapper] ==== pilot stdout END ====
[2025-05-25 23:00:08] 2025-05-26 03:00:08,266 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 23:00:08] 2025-05-26 03:00:08,269 [wrapper] pilotpid: 3349225
[2025-05-25 23:00:08] 2025-05-26 03:00:08,271 [wrapper] Pilot exit status: 0
[2025-05-25 23:00:08] 2025-05-26 03:00:08,300 [wrapper] pandaids: 6665726168
[2025-05-25 23:00:08] 2025-05-26 03:00:08,580 [wrapper] cleanup supervisor_pilot 2221451 3349226
[2025-05-25 23:00:08] 2025-05-26 03:00:08,584 [wrapper] Test setup, not cleaning
[2025-05-25 23:00:08] 2025-05-26 03:00:08,594 [wrapper] apfmon messages muted
[2025-05-25 23:00:08] 2025-05-26 03:00:08,607 [wrapper] ==== wrapper stdout END ====
[2025-05-25 23:00:08] 2025-05-26 03:00:08,610 [wrapper] ==== wrapper stderr END ====
[2025-05-25 23:00:08]  *** Error codes and diagnostics ***
[2025-05-25 23:00:08]     "exeErrorCode": 0,
[2025-05-25 23:00:08]     "exeErrorDiag": "",
[2025-05-25 23:00:08]     "pilotErrorCode": 0,
[2025-05-25 23:00:08]     "pilotErrorDiag": "",
[2025-05-25 23:00:08]  *** Listing of results directory ***
[2025-05-25 23:00:08] total 417664
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas    495897 May 25 06:45 pilot3.tar.gz
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas      5111 May 25 07:02 queuedata.json
[2025-05-25 23:00:08] -rwx------. 1 boincer umatlas     37140 May 25 07:02 runpilot2-wrapper.sh
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas       100 May 25 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 23:00:08] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 18:51 run_atlas
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas       105 May 25 18:51 job.xml
[2025-05-25 23:00:08] -rw-r--r--. 2 boincer umatlas 222922527 May 25 18:51 EVNT.44871834._001334.pool.root.1
[2025-05-25 23:00:08] -rw-r--r--. 2 boincer umatlas    508880 May 25 18:51 input.tar.gz
[2025-05-25 23:00:08] -rw-r--r--. 2 boincer umatlas     15093 May 25 18:51 start_atlas.sh
[2025-05-25 23:00:08] drwxrwx--x. 2 boincer umatlas      4096 May 25 18:51 shared
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas         0 May 25 18:51 boinc_lockfile
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas      2558 May 25 18:51 pandaJob.out
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas    990803 May 25 18:52 agis_schedconf.cvmfs.json
[2025-05-25 23:00:08] drwx------. 4 boincer umatlas      4096 May 25 18:52 pilot3
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas       530 May 25 22:58 boinc_task_state.xml
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas 197774075 May 25 22:58 HITS.44871837._033447.pool.root.1
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas      6934 May 25 22:58 init_data.xml
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas      1050 May 25 22:59 memory_monitor_summary.json
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas   1596740 May 25 22:59 agis_ddmendpoints.agis.ALL.json
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas    386556 May 25 22:59 log.44871837._033447.job.log.tgz.1
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas        95 May 25 22:59 pilot_heartbeat.json
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas      7717 May 25 22:59 heartbeat.json
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas      4871 May 25 23:00 pilotlog.txt
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas        28 May 25 23:00 wrapper_checkpoint.txt
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas   1195878 May 25 23:00 log.44871837._033447.job.log.1
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas       357 May 25 23:00 output.list
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas      8192 May 25 23:00 boinc_mmap_file
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas       620 May 25 23:00 runtime_log
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas   1597440 May 25 23:00 result.tar.gz
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas       658 May 25 23:00 X9ONDmyIOd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVzTKDmVquakn.diag
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas      8655 May 25 23:00 runtime_log.err
[2025-05-25 23:00:08] -rw-r--r--. 1 boincer umatlas     21093 May 25 23:00 stderr.txt
[2025-05-25 23:00:08] HITS file was successfully produced:
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas 197774075 May 25 22:58 shared/HITS.pool.root.1
[2025-05-25 23:00:08]  *** Contents of shared directory: ***
[2025-05-25 23:00:08] total 412924
[2025-05-25 23:00:08] -rw-r--r--. 2 boincer umatlas 222922527 May 25 18:51 ATLAS.root_0
[2025-05-25 23:00:08] -rw-r--r--. 2 boincer umatlas    508880 May 25 18:51 input.tar.gz
[2025-05-25 23:00:08] -rw-r--r--. 2 boincer umatlas     15093 May 25 18:51 start_atlas.sh
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas 197774075 May 25 22:58 HITS.pool.root.1
[2025-05-25 23:00:08] -rw-------. 1 boincer umatlas   1597440 May 25 23:00 result.tar.gz
23:00:10 (3336901): run_atlas exited; CPU time 39202.711554
23:00:10 (3336901): called boinc_finish(0)

</stderr_txt>
]]>

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