Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:00:11 (776125): wrapper (7.7.26015): starting
18:00:11 (776125): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 18:00:11] Arguments: --nthreads 8
[2025-05-25 18:00:11] Threads: 8
[2025-05-25 18:00:11] Checking for CVMFS
[2025-05-25 18:00:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 18:00:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 18:00:12] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 18:00:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 18:00:12] 2.12.6.0 7887 23481 538924 146415 1 1094 24226230 32935937 30324 16776704 0 235324770 99.694 187416608 22578 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 18:00:12] CVMFS is ok
[2025-05-25 18:00:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 18:00:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 18:00:12] Further information can be found at the LHC@home message board.
[2025-05-25 18:00:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 18:00:12] Checking for apptainer binary...
[2025-05-25 18:00:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 18:00:12] Running /usr/bin/apptainer --version
[2025-05-25 18:00:12] apptainer version 1.4.1-1.el9
[2025-05-25 18:00:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 18:00:13] c7-3-28.aglt2.org
[2025-05-25 18:00:13] apptainer works
[2025-05-25 18:00:13] Set ATHENA_PROC_NUMBER=8
[2025-05-25 18:00:13] Set ATHENA_CORE_NUMBER=8
[2025-05-25 18:00:13] Starting ATLAS job with PandaID=6665729707
[2025-05-25 18:00:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 22:05:02]  *** The last 200 lines of the pilot log: ***
[2025-05-25 22:05:02] 2025-05-26 02:04:45,205 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 22:05:02] 2025-05-26 02:04:45,205 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6665729707/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,209 | INFO     | extracted standard info from prmon json
[2025-05-25 22:05:02] 2025-05-26 02:04:45,213 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 22:05:02] 2025-05-26 02:04:45,213 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 22:05:02] 2025-05-26 02:04:45,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 22:05:02] 2025-05-26 02:04:45,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 22:05:02] 2025-05-26 02:04:45,220 | INFO     | fitting pss+swap vs Time
[2025-05-25 22:05:02] 2025-05-26 02:04:45,220 | INFO     | sum of square deviations: 4127793390.8945065
[2025-05-25 22:05:02] 2025-05-26 02:04:45,222 | INFO     | sum of deviations: 80885830749.5949
[2025-05-25 22:05:02] 2025-05-26 02:04:45,226 | INFO     | mean x: 1748217799.021097
[2025-05-25 22:05:02] 2025-05-26 02:04:45,226 | INFO     | mean y: 2098514.481012658
[2025-05-25 22:05:02] 2025-05-26 02:04:45,226 | INFO     | -- intersect: -34254957402.362392
[2025-05-25 22:05:02] 2025-05-26 02:04:45,226 | INFO     | intersect: -34254957402.362392
[2025-05-25 22:05:02] 2025-05-26 02:04:45,226 | INFO     | chi2: 5.160978401175644
[2025-05-25 22:05:02] 2025-05-26 02:04:45,227 | INFO     | sum of square deviations: 3872013375.8922343
[2025-05-25 22:05:02] 2025-05-26 02:04:45,228 | INFO     | sum of deviations: 108040175009.18958
[2025-05-25 22:05:02] 2025-05-26 02:04:45,228 | INFO     | mean x: 1748217646.5215516
[2025-05-25 22:05:02] 2025-05-26 02:04:45,228 | INFO     | mean y: 2114489.3620689656
[2025-05-25 22:05:02] 2025-05-26 02:04:45,228 | INFO     | -- intersect: -48778125181.37991
[2025-05-25 22:05:02] 2025-05-26 02:04:45,228 | INFO     | intersect: -48778125181.37991
[2025-05-25 22:05:02] 2025-05-26 02:04:45,228 | INFO     | chi2: 3.5053962551499755
[2025-05-25 22:05:02] 2025-05-26 02:04:45,228 | INFO     | current chi2=3.5053962551499755 (change=32.07884275680238 %)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,229 | INFO     | sum of square deviations: 3627024260.889859
[2025-05-25 22:05:02] 2025-05-26 02:04:45,234 | INFO     | sum of deviations: 104714237196.74889
[2025-05-25 22:05:02] 2025-05-26 02:04:45,234 | INFO     | mean x: 1748217494.0220265
[2025-05-25 22:05:02] 2025-05-26 02:04:45,234 | INFO     | mean y: 2112423.8502202644
[2025-05-25 22:05:02] 2025-05-26 02:04:45,234 | INFO     | -- intersect: -50469913174.240326
[2025-05-25 22:05:02] 2025-05-26 02:04:45,234 | INFO     | intersect: -50469913174.240326
[2025-05-25 22:05:02] 2025-05-26 02:04:45,235 | INFO     | chi2: 3.5029647894830966
[2025-05-25 22:05:02] 2025-05-26 02:04:45,235 | INFO     | current chi2=3.5029647894830966 (change=0.06936350386369881 %)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,235 | INFO     | right removable region: 226
[2025-05-25 22:05:02] 2025-05-26 02:04:45,235 | INFO     | sum of square deviations: 3872010325.8922343
[2025-05-25 22:05:02] 2025-05-26 02:04:45,237 | INFO     | sum of deviations: 24355437983.107758
[2025-05-25 22:05:02] 2025-05-26 02:04:45,237 | INFO     | mean x: 1748217951.5215516
[2025-05-25 22:05:02] 2025-05-26 02:04:45,237 | INFO     | mean y: 2132110.478448276
[2025-05-25 22:05:02] 2025-05-26 02:04:45,237 | INFO     | -- intersect: -10994381409.77601
[2025-05-25 22:05:02] 2025-05-26 02:04:45,237 | INFO     | intersect: -10994381409.77601
[2025-05-25 22:05:02] 2025-05-26 02:04:45,237 | INFO     | chi2: 2.140089772941268
[2025-05-25 22:05:02] 2025-05-26 02:04:45,237 | INFO     | current chi2=2.140089772941268 (change=58.53325461595098 %)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,238 | INFO     | sum of square deviations: 3627018160.889859
[2025-05-25 22:05:02] 2025-05-26 02:04:45,259 | INFO     | sum of deviations: 7760848644.339226
[2025-05-25 22:05:02] 2025-05-26 02:04:45,260 | INFO     | mean x: 1748218104.0220265
[2025-05-25 22:05:02] 2025-05-26 02:04:45,260 | INFO     | mean y: 2142391.1321585905
[2025-05-25 22:05:02] 2025-05-26 02:04:45,260 | INFO     | -- intersect: -3738576706.695552
[2025-05-25 22:05:02] 2025-05-26 02:04:45,260 | INFO     | intersect: -3738576706.695552
[2025-05-25 22:05:02] 2025-05-26 02:04:45,260 | INFO     | chi2: 1.8886460784376138
[2025-05-25 22:05:02] 2025-05-26 02:04:45,260 | INFO     | current chi2=1.8886460784376138 (change=11.749212471497323 %)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,260 | INFO     | left removable region: 20
[2025-05-25 22:05:02] 2025-05-26 02:04:45,261 | INFO     | sum of square deviations: 2710645935.3786435
[2025-05-25 22:05:02] 2025-05-26 02:04:45,262 | INFO     | sum of deviations: 20797841099.097088
[2025-05-25 22:05:02] 2025-05-26 02:04:45,262 | INFO     | mean x: 1748218073.5242717
[2025-05-25 22:05:02] 2025-05-26 02:04:45,262 | INFO     | mean y: 2167812.480582524
[2025-05-25 22:05:02] 2025-05-26 02:04:45,262 | INFO     | -- intersect: -13411299887.294271
[2025-05-25 22:05:02] 2025-05-26 02:04:45,262 | INFO     | intersect: -13411299887.294271
[2025-05-25 22:05:02] 2025-05-26 02:04:45,262 | INFO     | chi2: 0.11816480662707522
[2025-05-25 22:05:02] 2025-05-26 02:04:45,263 | INFO     | -- intersect: -13411299887.294271
[2025-05-25 22:05:02] 2025-05-26 02:04:45,292 | INFO     | current memory leak: 7.67 B/s (using 206 data points, chi2=0.12)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,292 | INFO     | ..............................
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . Timing measurements:
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . get job = 0 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . initial setup = 8 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . payload setup = 46 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . stage-in = 0 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . payload execution = 14476 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . stage-out = 3 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | . log creation = 0 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,293 | INFO     | ..............................
[2025-05-25 22:05:02] 2025-05-26 02:04:45,510 | INFO     | 
[2025-05-25 22:05:02] 2025-05-26 02:04:45,510 | INFO     | job summary report
[2025-05-25 22:05:02] 2025-05-26 02:04:45,510 | INFO     | --------------------------------------------------
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | PanDA job id: 6665729707
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | task id: 44871837
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | errors: (none)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | pilot state: finished 
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | transexitcode: 0
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | exeerrorcode: 0
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | exeerrordiag: 
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | exitcode: 0
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | exitmsg: OK
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | cpuconsumptiontime: 38965 s
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | nevents: 400
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | neventsw: 0
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | pid: 810979
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | pgrp: 810979
[2025-05-25 22:05:02] 2025-05-26 02:04:45,511 | INFO     | corecount: 8
[2025-05-25 22:05:02] 2025-05-26 02:04:45,512 | INFO     | event service: False
[2025-05-25 22:05:02] 2025-05-26 02:04:45,512 | INFO     | sizes: {0: 2393570, 1: 2393769, 12: 2393769, 23: 2393797, 30: 2394031, 34: 2394059, 14528: 2424676, 14533: 2433617, 14536: 2433673, 14553: 2433843}
[2025-05-25 22:05:02] 2025-05-26 02:04:45,512 | INFO     | --------------------------------------------------
[2025-05-25 22:05:02] 2025-05-26 02:04:45,512 | INFO     | 
[2025-05-25 22:05:02] 2025-05-26 02:04:45,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | job 6665729707 has completed (purged errors)
[2025-05-25 22:05:02] 2025-05-26 02:04:45,549 | INFO     | overall cleanup function is called
[2025-05-25 22:05:02] 2025-05-26 02:04:46,558 | INFO     | --- collectZombieJob: --- 10, [810979]
[2025-05-25 22:05:02] 2025-05-26 02:04:46,559 | INFO     | zombie collector waiting for pid 810979
[2025-05-25 22:05:02] 2025-05-26 02:04:46,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 22:05:02] 2025-05-26 02:04:46,560 | INFO     | collected zombie processes
[2025-05-25 22:05:02] 2025-05-26 02:04:46,560 | INFO     | will attempt to kill all subprocesses of pid=810979
[2025-05-25 22:05:02] 2025-05-26 02:04:47,665 | INFO     | process IDs to be killed: [810979] (in reverse order)
[2025-05-25 22:05:02] 2025-05-26 02:04:47,874 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 22:05:02] 2025-05-26 02:04:47,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 22:05:02] 2025-05-26 02:04:47,917 | INFO     | did not find any defunct processes belonging to 810979
[2025-05-25 22:05:02] 2025-05-26 02:04:47,940 | INFO     | did not find any defunct processes belonging to 810979
[2025-05-25 22:05:02] 2025-05-26 02:04:47,941 | INFO     | ready for new job
[2025-05-25 22:05:02] 2025-05-26 02:04:47,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 22:05:02] 2025-05-26 02:04:47,943 | INFO     | **************************************
[2025-05-25 22:05:02] 2025-05-26 02:04:47,943 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 22:05:02] 2025-05-26 02:04:47,943 | INFO     | **************************************
[2025-05-25 22:05:02] 2025-05-26 02:04:47,943 | INFO     | 
[2025-05-25 22:05:02] 2025-05-26 02:04:47,958 | INFO     | architecture information:
[2025-05-25 22:05:02] 2025-05-26 02:04:47,959 | INFO     | executing command: cat /etc/os-release
[2025-05-25 22:05:02] 2025-05-26 02:04:48,029 | INFO     | cat /etc/os-release:
[2025-05-25 22:05:02] NAME="CentOS Linux"
[2025-05-25 22:05:02] VERSION="7 (Core)"
[2025-05-25 22:05:02] ID="centos"
[2025-05-25 22:05:02] ID_LIKE="rhel fedora"
[2025-05-25 22:05:02] VERSION_ID="7"
[2025-05-25 22:05:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 22:05:02] ANSI_COLOR="0;31"
[2025-05-25 22:05:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 22:05:02] HOME_URL="https://www.centos.org/"
[2025-05-25 22:05:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 22:05:02] 
[2025-05-25 22:05:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 22:05:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 22:05:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 22:05:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 22:05:02] 
[2025-05-25 22:05:02] 2025-05-26 02:04:48,029 | INFO     | **************************************
[2025-05-25 22:05:02] 2025-05-26 02:04:48,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-25 22:05:02] 2025-05-26 02:04:48,613 | INFO     | sufficient remaining disk space (73794584576 B)
[2025-05-25 22:05:02] 2025-05-26 02:04:48,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 22:05:02] 2025-05-26 02:04:48,613 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 22:05:02] 2025-05-26 02:04:48,613 | INFO     | update_server=False
[2025-05-25 22:05:02] 2025-05-26 02:04:48,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 22:05:02] 2025-05-26 02:04:48,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 22:05:02] 2025-05-26 02:04:48,614 | INFO     | aborting loop
[2025-05-25 22:05:02] 2025-05-26 02:04:48,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 22:05:02] 2025-05-26 02:04:49,068 | INFO     | all payload control threads have been joined
[2025-05-25 22:05:02] 2025-05-26 02:04:49,357 | INFO     | all data control threads have been joined
[2025-05-25 22:05:02] 2025-05-26 02:04:49,588 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 22:05:02] 2025-05-26 02:04:49,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 22:05:02] 2025-05-26 02:04:49,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 22:05:02] 2025-05-26 02:04:49,619 | INFO     | [job] retrieve thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:49,619 | INFO     | [job] job monitor thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:49,706 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:49,711 | INFO     | all job control threads have been joined
[2025-05-25 22:05:02] 2025-05-26 02:04:49,822 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,077 | INFO     | [payload] control thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,130 | INFO     | [job] validate thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,142 | INFO     | [payload] validate_post thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,253 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,363 | INFO     | [data] control thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 22:05:02] 2025-05-26 02:04:50,620 | INFO     | [data] copytool_out thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,716 | INFO     | [job] control thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,927 | INFO     | [data] copytool_in thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:50,971 | INFO     | [payload] failed_post thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:51,549 | INFO     | [job] queue monitor thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:51,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 22:05:02] 2025-05-26 02:04:55,803 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 22:05:02] 2025-05-26 02:04:56,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265469507392)>', '<ExcThread(monitor, started 140264698013440)>']
[2025-05-25 22:05:02] 2025-05-26 02:04:56,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 22:05:02] 2025-05-26 02:04:56,669 | INFO     | [monitor] control thread has ended
[2025-05-25 22:05:02] 2025-05-26 02:05:01,498 | INFO     | all workflow threads have been joined
[2025-05-25 22:05:02] 2025-05-26 02:05:01,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 22:05:02] 2025-05-26 02:05:01,498 | INFO     | traces error code: 0
[2025-05-25 22:05:02] 2025-05-26 02:05:01,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 22:05:02] 2025-05-26 02:05:01,895 [wrapper] ==== pilot stdout END ====
[2025-05-25 22:05:02] 2025-05-26 02:05:01,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 22:05:02] 2025-05-26 02:05:01,984 [wrapper] pilotpid: 784335
[2025-05-25 22:05:02] 2025-05-26 02:05:01,992 [wrapper] Pilot exit status: 0
[2025-05-25 22:05:02] 2025-05-26 02:05:02,020 [wrapper] pandaids: 6665729707
[2025-05-25 22:05:02] 2025-05-26 02:05:02,242 [wrapper] cleanup supervisor_pilot 3755625 784336
[2025-05-25 22:05:02] 2025-05-26 02:05:02,276 [wrapper] Test setup, not cleaning
[2025-05-25 22:05:02] 2025-05-26 02:05:02,286 [wrapper] apfmon messages muted
[2025-05-25 22:05:02] 2025-05-26 02:05:02,332 [wrapper] ==== wrapper stdout END ====
[2025-05-25 22:05:02] 2025-05-26 02:05:02,335 [wrapper] ==== wrapper stderr END ====
[2025-05-25 22:05:02]  *** Error codes and diagnostics ***
[2025-05-25 22:05:02]     "exeErrorCode": 0,
[2025-05-25 22:05:02]     "exeErrorDiag": "",
[2025-05-25 22:05:02]     "pilotErrorCode": 0,
[2025-05-25 22:05:02]     "pilotErrorDiag": "",
[2025-05-25 22:05:02]  *** Listing of results directory ***
[2025-05-25 22:05:02] total 417828
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas    495897 May 25 09:09 pilot3.tar.gz
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas      5111 May 25 09:23 queuedata.json
[2025-05-25 22:05:02] -rwx------. 1 boincer umatlas     37140 May 25 09:23 runpilot2-wrapper.sh
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas       100 May 25 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 22:05:02] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 18:00 run_atlas
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas       105 May 25 18:00 job.xml
[2025-05-25 22:05:02] -rw-r--r--. 2 boincer umatlas 225674567 May 25 18:00 EVNT.44871834._001405.pool.root.1
[2025-05-25 22:05:02] -rw-r--r--. 2 boincer umatlas     15093 May 25 18:00 start_atlas.sh
[2025-05-25 22:05:02] drwxrwx--x. 2 boincer umatlas      4096 May 25 18:00 shared
[2025-05-25 22:05:02] -rw-r--r--. 2 boincer umatlas    508877 May 25 18:00 input.tar.gz
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas         0 May 25 18:00 boinc_lockfile
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas      2559 May 25 18:00 pandaJob.out
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas    990803 May 25 18:01 agis_schedconf.cvmfs.json
[2025-05-25 22:05:02] drwx------. 4 boincer umatlas      4096 May 25 18:01 pilot3
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas 195168119 May 25 22:01 HITS.44871837._035237.pool.root.1
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas       531 May 25 22:01 boinc_task_state.xml
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas      6933 May 25 22:02 init_data.xml
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas        95 May 25 22:03 pilot_heartbeat.json
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas      1050 May 25 22:04 memory_monitor_summary.json
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas   1596740 May 25 22:04 agis_ddmendpoints.agis.ALL.json
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas    401709 May 25 22:04 log.44871837._035237.job.log.tgz.1
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas      7716 May 25 22:04 heartbeat.json
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas      8192 May 25 22:05 boinc_mmap_file
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas        28 May 25 22:05 wrapper_checkpoint.txt
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas      4353 May 25 22:05 pilotlog.txt
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas   1186467 May 25 22:05 log.44871837._035237.job.log.1
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas       357 May 25 22:05 output.list
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas       620 May 25 22:05 runtime_log
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas   1607680 May 25 22:05 result.tar.gz
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas       659 May 25 22:05 W4eKDmxUQd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVaOKDmEYqEXm.diag
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas      8655 May 25 22:05 runtime_log.err
[2025-05-25 22:05:02] -rw-r--r--. 1 boincer umatlas     20678 May 25 22:05 stderr.txt
[2025-05-25 22:05:02] HITS file was successfully produced:
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas 195168119 May 25 22:01 shared/HITS.pool.root.1
[2025-05-25 22:05:02]  *** Contents of shared directory: ***
[2025-05-25 22:05:02] total 413080
[2025-05-25 22:05:02] -rw-r--r--. 2 boincer umatlas 225674567 May 25 18:00 ATLAS.root_0
[2025-05-25 22:05:02] -rw-r--r--. 2 boincer umatlas     15093 May 25 18:00 start_atlas.sh
[2025-05-25 22:05:02] -rw-r--r--. 2 boincer umatlas    508877 May 25 18:00 input.tar.gz
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas 195168119 May 25 22:01 HITS.pool.root.1
[2025-05-25 22:05:02] -rw-------. 1 boincer umatlas   1607680 May 25 22:05 result.tar.gz
22:05:03 (776125): run_atlas exited; CPU time 39554.865880
22:05:03 (776125): called boinc_finish(0)

</stderr_txt>
]]>

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