Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:54:27 (2691254): wrapper (7.7.26015): starting
17:54:27 (2691254): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 17:54:27] Arguments: --nthreads 8
[2025-05-25 17:54:27] Threads: 8
[2025-05-25 17:54:27] Checking for CVMFS
[2025-05-25 17:54:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 17:54:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 17:54:28] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 17:54:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 17:54:28] 2.12.6.0 1594372 9680 349104 146415 0 467 25893377 32935936 25711 16776704 0 65423843 99.531 76412476 23068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 17:54:28] CVMFS is ok
[2025-05-25 17:54:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 17:54:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 17:54:28] Further information can be found at the LHC@home message board.
[2025-05-25 17:54:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 17:54:28] Checking for apptainer binary...
[2025-05-25 17:54:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 17:54:28] Running /usr/bin/apptainer --version
[2025-05-25 17:54:28] apptainer version 1.4.1-1.el9
[2025-05-25 17:54:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 17:54:29] c7-4-31.aglt2.org
[2025-05-25 17:54:29] apptainer works
[2025-05-25 17:54:29] Set ATHENA_PROC_NUMBER=8
[2025-05-25 17:54:29] Set ATHENA_CORE_NUMBER=8
[2025-05-25 17:54:29] Starting ATLAS job with PandaID=6665734600
[2025-05-25 17:54:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 20:03:30]  *** The last 200 lines of the pilot log: ***
[2025-05-25 20:03:30] 2025-05-26 00:03:09,090 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665734600/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,091 | INFO     | extracted standard info from prmon json
[2025-05-25 20:03:30] 2025-05-26 00:03:09,091 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 20:03:30] 2025-05-26 00:03:09,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 20:03:30] 2025-05-26 00:03:09,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 20:03:30] 2025-05-26 00:03:09,091 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 20:03:30] 2025-05-26 00:03:09,093 | INFO     | fitting pss+swap vs Time
[2025-05-25 20:03:30] 2025-05-26 00:03:09,093 | INFO     | sum of square deviations: 605599460.9920013
[2025-05-25 20:03:30] 2025-05-26 00:03:09,094 | INFO     | sum of deviations: 26528696785.799995
[2025-05-25 20:03:30] 2025-05-26 00:03:09,096 | INFO     | mean x: 1748213959.008
[2025-05-25 20:03:30] 2025-05-26 00:03:09,096 | INFO     | mean y: 2083006.2
[2025-05-25 20:03:30] 2025-05-26 00:03:09,096 | INFO     | -- intersect: -76579619955.1221
[2025-05-25 20:03:30] 2025-05-26 00:03:09,096 | INFO     | intersect: -76579619955.1221
[2025-05-25 20:03:30] 2025-05-26 00:03:09,097 | INFO     | chi2: 2.341149282076856
[2025-05-25 20:03:30] 2025-05-26 00:03:09,097 | INFO     | sum of square deviations: 535793805.9916659
[2025-05-25 20:03:30] 2025-05-26 00:03:09,097 | INFO     | sum of deviations: 25474309663.025005
[2025-05-25 20:03:30] 2025-05-26 00:03:09,097 | INFO     | mean x: 1748213806.5083334
[2025-05-25 20:03:30] 2025-05-26 00:03:09,098 | INFO     | mean y: 2080706.475
[2025-05-25 20:03:30] 2025-05-26 00:03:09,098 | INFO     | -- intersect: -83116722396.7876
[2025-05-25 20:03:30] 2025-05-26 00:03:09,098 | INFO     | intersect: -83116722396.7876
[2025-05-25 20:03:30] 2025-05-26 00:03:09,098 | INFO     | chi2: 2.3416185980437096
[2025-05-25 20:03:30] 2025-05-26 00:03:09,098 | INFO     | current chi2=2.3416185980437096 (change=-0.02004639219065562 %)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,098 | INFO     | right removable region: 119
[2025-05-25 20:03:30] 2025-05-26 00:03:09,098 | INFO     | sum of square deviations: 535793195.9916659
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | sum of deviations: 3762598299.441667
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | mean x: 1748214111.5083334
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | mean y: 2132159.058333333
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | -- intersect: -12274670704.865114
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | intersect: -12274670704.865114
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | chi2: 0.10983330655864311
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | current chi2=0.10983330655864311 (change=95.30857312690421 %)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,099 | INFO     | sum of square deviations: 471568430.99130464
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | sum of deviations: 892365609.1130434
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | mean x: 1748214264.0086956
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | mean y: 2138833.886956522
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | -- intersect: -3306068806.906107
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | intersect: -3306068806.906107
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | chi2: 0.042448660110714444
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | current chi2=0.042448660110714444 (change=61.351741615782174 %)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,100 | INFO     | sum of square deviations: 412692603.4909094
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | sum of deviations: 614761348.5999998
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | mean x: 1748214416.509091
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | mean y: 2139536.4
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | -- intersect: -2602061855.2509756
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | intersect: -2602061855.2509756
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | chi2: 0.04147505630518451
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | current chi2=0.04147505630518451 (change=2.2936031502303744 %)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | left removable region: 30
[2025-05-25 20:03:30] 2025-05-26 00:03:09,101 | INFO     | sum of square deviations: 218576786.98876375
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | sum of deviations: 289651023.58426964
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | mean x: 1748214691.011236
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | mean y: 2141516.415730337
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | -- intersect: -2314537128.524242
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | intersect: -2314537128.524242
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | chi2: 0.030420529702799043
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | -- intersect: -2314537128.524242
[2025-05-25 20:03:30] 2025-05-26 00:03:09,102 | INFO     | current memory leak: 1.33 B/s (using 89 data points, chi2=0.03)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | ..............................
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . Timing measurements:
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . get job = 0 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . initial setup = 4 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . payload setup = 25 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . stage-in = 0 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . payload execution = 7605 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . stage-out = 1 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | . log creation = 0 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,103 | INFO     | ..............................
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | 
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | job summary report
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | --------------------------------------------------
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | PanDA job id: 6665734600
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | task id: 44871837
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | errors: (none)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | pilot state: finished 
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | transexitcode: 0
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | exeerrorcode: 0
[2025-05-25 20:03:30] 2025-05-26 00:03:09,431 | INFO     | exeerrordiag: 
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | exitcode: 0
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | exitmsg: OK
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | cpuconsumptiontime: 38156 s
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | nevents: 400
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | neventsw: 0
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | pid: 2711264
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | pgrp: 2711264
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | corecount: 8
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | event service: False
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | sizes: {0: 2393515, 1: 2393770, 12: 2393770, 14: 2394004, 22: 2394032, 7634: 2421598, 7635: 2430539, 7639: 2430595, 7652: 2430765}
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | --------------------------------------------------
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | 
[2025-05-25 20:03:30] 2025-05-26 00:03:09,432 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 20:03:30] 2025-05-26 00:03:09,594 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,595 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | job 6665734600 has completed (purged errors)
[2025-05-25 20:03:30] 2025-05-26 00:03:09,596 | INFO     | overall cleanup function is called
[2025-05-25 20:03:30] 2025-05-26 00:03:10,603 | INFO     | --- collectZombieJob: --- 10, [2711264]
[2025-05-25 20:03:30] 2025-05-26 00:03:10,604 | INFO     | zombie collector waiting for pid 2711264
[2025-05-25 20:03:30] 2025-05-26 00:03:10,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 20:03:30] 2025-05-26 00:03:10,604 | INFO     | collected zombie processes
[2025-05-25 20:03:30] 2025-05-26 00:03:10,604 | INFO     | will attempt to kill all subprocesses of pid=2711264
[2025-05-25 20:03:30] 2025-05-26 00:03:11,041 | INFO     | process IDs to be killed: [2711264] (in reverse order)
[2025-05-25 20:03:30] 2025-05-26 00:03:11,202 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 20:03:30] 2025-05-26 00:03:11,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 20:03:30] 2025-05-26 00:03:11,222 | INFO     | did not find any defunct processes belonging to 2711264
[2025-05-25 20:03:30] 2025-05-26 00:03:11,241 | INFO     | did not find any defunct processes belonging to 2711264
[2025-05-25 20:03:30] 2025-05-26 00:03:11,241 | INFO     | ready for new job
[2025-05-25 20:03:30] 2025-05-26 00:03:11,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 20:03:30] 2025-05-26 00:03:11,243 | INFO     | **************************************
[2025-05-25 20:03:30] 2025-05-26 00:03:11,243 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 20:03:30] 2025-05-26 00:03:11,244 | INFO     | **************************************
[2025-05-25 20:03:30] 2025-05-26 00:03:11,244 | INFO     | 
[2025-05-25 20:03:30] 2025-05-26 00:03:11,264 | INFO     | architecture information:
[2025-05-25 20:03:30] 2025-05-26 00:03:11,275 | INFO     | executing command: cat /etc/os-release
[2025-05-25 20:03:30] 2025-05-26 00:03:11,318 | INFO     | cat /etc/os-release:
[2025-05-25 20:03:30] NAME="CentOS Linux"
[2025-05-25 20:03:30] VERSION="7 (Core)"
[2025-05-25 20:03:30] ID="centos"
[2025-05-25 20:03:30] ID_LIKE="rhel fedora"
[2025-05-25 20:03:30] VERSION_ID="7"
[2025-05-25 20:03:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 20:03:30] ANSI_COLOR="0;31"
[2025-05-25 20:03:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 20:03:30] HOME_URL="https://www.centos.org/"
[2025-05-25 20:03:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 20:03:30] 
[2025-05-25 20:03:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 20:03:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 20:03:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 20:03:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 20:03:30] 
[2025-05-25 20:03:30] 2025-05-26 00:03:11,319 | INFO     | **************************************
[2025-05-25 20:03:30] 2025-05-26 00:03:11,822 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 20:03:30] 2025-05-26 00:03:11,935 | INFO     | sufficient remaining disk space (73986473984 B)
[2025-05-25 20:03:30] 2025-05-26 00:03:11,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 20:03:30] 2025-05-26 00:03:11,936 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 20:03:30] 2025-05-26 00:03:11,936 | INFO     | update_server=False
[2025-05-25 20:03:30] 2025-05-26 00:03:11,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 20:03:30] 2025-05-26 00:03:11,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 20:03:30] 2025-05-26 00:03:11,951 | INFO     | aborting loop
[2025-05-25 20:03:30] 2025-05-26 00:03:12,065 | INFO     | all payload control threads have been joined
[2025-05-25 20:03:30] 2025-05-26 00:03:12,554 | INFO     | all data control threads have been joined
[2025-05-25 20:03:30] 2025-05-26 00:03:12,891 | INFO     | all job control threads have been joined
[2025-05-25 20:03:30] 2025-05-26 00:03:12,907 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 20:03:30] 2025-05-26 00:03:12,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 20:03:30] 2025-05-26 00:03:12,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 20:03:30] 2025-05-26 00:03:12,942 | INFO     | [job] retrieve thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:12,944 | INFO     | [job] validate thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:12,956 | INFO     | [job] job monitor thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:12,964 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:13,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 20:03:30] 2025-05-26 00:03:13,069 | INFO     | [payload] validate_post thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:13,071 | INFO     | [payload] control thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:13,141 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:13,567 | INFO     | [data] control thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:13,590 | INFO     | [payload] failed_post thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:13,897 | INFO     | [job] control thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:14,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 20:03:30] 2025-05-26 00:03:14,276 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:14,442 | INFO     | [data] copytool_in thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:15,036 | INFO     | [data] copytool_out thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:15,207 | INFO     | [job] queue monitor thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:15,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 20:03:30] 2025-05-26 00:03:19,418 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:22,800 | INFO     | job.realtimelogging is not enabled
[2025-05-25 20:03:30] 2025-05-26 00:03:23,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 20:03:30] 2025-05-26 00:03:24,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462807590720)>', '<ExcThread(monitor, started 140462451050240)>']
[2025-05-25 20:03:30] 2025-05-26 00:03:25,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 20:03:30] 2025-05-26 00:03:25,003 | INFO     | [monitor] control thread has ended
[2025-05-25 20:03:30] 2025-05-26 00:03:29,669 | INFO     | all workflow threads have been joined
[2025-05-25 20:03:30] 2025-05-26 00:03:29,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 20:03:30] 2025-05-26 00:03:29,670 | INFO     | traces error code: 0
[2025-05-25 20:03:30] 2025-05-26 00:03:29,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 20:03:30] 2025-05-26 00:03:29,788 [wrapper] ==== pilot stdout END ====
[2025-05-25 20:03:30] 2025-05-26 00:03:29,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 20:03:30] 2025-05-26 00:03:29,860 [wrapper] pilotpid: 2696563
[2025-05-25 20:03:30] 2025-05-26 00:03:29,865 [wrapper] Pilot exit status: 0
[2025-05-25 20:03:30] 2025-05-26 00:03:30,027 [wrapper] pandaids: 6665734600
[2025-05-25 20:03:30] 2025-05-26 00:03:30,152 [wrapper] cleanup supervisor_pilot 3735686 2696564
[2025-05-25 20:03:30] 2025-05-26 00:03:30,155 [wrapper] Test setup, not cleaning
[2025-05-25 20:03:30] 2025-05-26 00:03:30,213 [wrapper] apfmon messages muted
[2025-05-25 20:03:30] 2025-05-26 00:03:30,266 [wrapper] ==== wrapper stdout END ====
[2025-05-25 20:03:30] 2025-05-26 00:03:30,273 [wrapper] ==== wrapper stderr END ====
[2025-05-25 20:03:30]  *** Error codes and diagnostics ***
[2025-05-25 20:03:30]     "exeErrorCode": 0,
[2025-05-25 20:03:30]     "exeErrorDiag": "",
[2025-05-25 20:03:30]     "pilotErrorCode": 0,
[2025-05-25 20:03:30]     "pilotErrorDiag": "",
[2025-05-25 20:03:30]  *** Listing of results directory ***
[2025-05-25 20:03:30] total 412344
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas    495897 May 25 11:56 pilot3.tar.gz
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas      5111 May 25 12:08 queuedata.json
[2025-05-25 20:03:30] -rwx------. 1 boincer umatlas     37140 May 25 12:09 runpilot2-wrapper.sh
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas       100 May 25 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 20:03:30] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 17:54 run_atlas
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas       105 May 25 17:54 job.xml
[2025-05-25 20:03:30] -rw-r--r--. 2 boincer umatlas 222801062 May 25 17:54 EVNT.44871834._001486.pool.root.1
[2025-05-25 20:03:30] -rw-r--r--. 2 boincer umatlas     15093 May 25 17:54 start_atlas.sh
[2025-05-25 20:03:30] drwxrwx--x. 2 boincer umatlas      4096 May 25 17:54 shared
[2025-05-25 20:03:30] -rw-r--r--. 2 boincer umatlas    508880 May 25 17:54 input.tar.gz
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas         0 May 25 17:54 boinc_lockfile
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas      2560 May 25 17:54 pandaJob.out
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas    990803 May 25 17:54 agis_schedconf.cvmfs.json
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas   1596740 May 25 17:55 agis_ddmendpoints.agis.ALL.json
[2025-05-25 20:03:30] drwx------. 4 boincer umatlas      4096 May 25 17:55 pilot3
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas 193599086 May 25 20:02 HITS.44871837._037257.pool.root.1
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas       530 May 25 20:02 boinc_task_state.xml
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas      1035 May 25 20:02 memory_monitor_summary.json
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas    330555 May 25 20:02 log.44871837._037257.job.log.tgz.1
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas        95 May 25 20:03 pilot_heartbeat.json
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas      7689 May 25 20:03 heartbeat.json
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas      6933 May 25 20:03 init_data.xml
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas        27 May 25 20:03 wrapper_checkpoint.txt
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas      8192 May 25 20:03 boinc_mmap_file
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas      4425 May 25 20:03 pilotlog.txt
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas    674890 May 25 20:03 log.44871837._037257.job.log.1
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas       357 May 25 20:03 output.list
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas       620 May 25 20:03 runtime_log
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas   1024000 May 25 20:03 result.tar.gz
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas       652 May 25 20:03 MKpNDmk5Sd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTnOKDmr64dLo.diag
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas      8654 May 25 20:03 runtime_log.err
[2025-05-25 20:03:30] -rw-r--r--. 1 boincer umatlas     20889 May 25 20:03 stderr.txt
[2025-05-25 20:03:30] HITS file was successfully produced:
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas 193599086 May 25 20:02 shared/HITS.pool.root.1
[2025-05-25 20:03:30]  *** Contents of shared directory: ***
[2025-05-25 20:03:30] total 408168
[2025-05-25 20:03:30] -rw-r--r--. 2 boincer umatlas 222801062 May 25 17:54 ATLAS.root_0
[2025-05-25 20:03:30] -rw-r--r--. 2 boincer umatlas     15093 May 25 17:54 start_atlas.sh
[2025-05-25 20:03:30] -rw-r--r--. 2 boincer umatlas    508880 May 25 17:54 input.tar.gz
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas 193599086 May 25 20:02 HITS.pool.root.1
[2025-05-25 20:03:30] -rw-------. 1 boincer umatlas   1024000 May 25 20:03 result.tar.gz
20:03:32 (2691254): run_atlas exited; CPU time 38367.121660
20:03:32 (2691254): called boinc_finish(0)

</stderr_txt>
]]>

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