Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:06:30 (882546): wrapper (7.7.26015): starting
12:06:30 (882546): wrapper: running run_atlas (--nthreads 3)
[2025-05-26 12:06:30] Arguments: --nthreads 3
[2025-05-26 12:06:30] Threads: 3
[2025-05-26 12:06:30] Checking for CVMFS
[2025-05-26 12:06:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 12:06:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 12:06:30] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 12:06:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 12:06:30] 2.9.2.0 69822 3041 80448 146432 1 56 36056484 36864001 0 130560 0 2168374 99.990 773211 8970 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-26 12:06:30] CVMFS is ok
[2025-05-26 12:06:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 12:06:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 12:06:30] Further information can be found at the LHC@home message board.
[2025-05-26 12:06:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 12:06:30] Checking for apptainer binary...
[2025-05-26 12:06:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 12:06:30] Running /usr/bin/apptainer --version
[2025-05-26 12:06:30] apptainer version 1.3.6-6.1
[2025-05-26 12:06:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 12:06:30] thA354b
[2025-05-26 12:06:30] apptainer works
[2025-05-26 12:06:30] Set ATHENA_PROC_NUMBER=3
[2025-05-26 12:06:30] Set ATHENA_CORE_NUMBER=3
[2025-05-26 12:06:30] Starting ATLAS job with PandaID=6665734053
[2025-05-26 12:06:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 13:46:44]  *** The last 200 lines of the pilot log: ***
[2025-05-26 13:46:44]  filetype=log
[2025-05-26 13:46:44]  guid=6b195aed-6f42-483b-9cf1-43afd94e8b8f
[2025-05-26 13:46:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-26 13:46:44]  is_altstaged=None
[2025-05-26 13:46:44]  is_tar=False
[2025-05-26 13:46:44]  lfn=log.44871837._037170.job.log.tgz.1
[2025-05-26 13:46:44]  mtime=0
[2025-05-26 13:46:44]  protocol_id=None
[2025-05-26 13:46:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-26 13:46:44]  replicas=None
[2025-05-26 13:46:44]  scope=mc23_13p6TeV
[2025-05-26 13:46:44]  status=None
[2025-05-26 13:46:44]  status_code=0
[2025-05-26 13:46:44]  storage_token=
[2025-05-26 13:46:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6665734053/log.44871837._037170.job.log.tgz.1
[2025-05-26 13:46:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/c4/log.44871837._037170.job.log.tgz.1
[2025-05-26 13:46:44]  workdir=None
[2025-05-26 13:46:44] ]
[2025-05-26 13:46:44] 2025-05-26 11:45:58,674 | INFO     | transferring file log.44871837._037170.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6665734053/log.44871837._037170.job.log.tgz.1 to /local/data/boinc/
[2025-05-26 13:46:44] 2025-05-26 11:45:58,674 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6665734053/log.44871837._037170.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0371
[2025-05-26 13:46:44] 2025-05-26 11:45:58,686 | INFO     | adding to output.list: log.44871837._037170.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/c4/log.44871837._037170.job.log.tg
[2025-05-26 13:46:44] 2025-05-26 11:45:58,687 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-26 13:46:44] 2025-05-26 11:45:58,687 | INFO     | summary of transferred files:
[2025-05-26 13:46:44] 2025-05-26 11:45:58,687 | INFO     |  -- lfn=log.44871837._037170.job.log.tgz.1, status_code=0, status=transferred
[2025-05-26 13:46:44] 2025-05-26 11:45:58,687 | INFO     | stage-out finished correctly
[2025-05-26 13:46:44] 2025-05-26 11:45:59,074 | INFO     | monitor loop #459: job 0:6665734053 is in state 'finished'
[2025-05-26 13:46:44] 2025-05-26 11:45:59,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 13:46:44] 2025-05-26 11:45:59,824 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-26 13:46:44] 2025-05-26 11:46:01,578 | INFO     | monitor loop #460: job 0:6665734053 is in state 'finished'
[2025-05-26 13:46:44] 2025-05-26 11:46:01,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 13:46:44] 2025-05-26 11:46:01,851 | INFO     | job 6665734053 has state=finished
[2025-05-26 13:46:44] 2025-05-26 11:46:01,851 | INFO     | preparing for final server update for job 6665734053 in state='finished'
[2025-05-26 13:46:44] 2025-05-26 11:46:01,851 | INFO     | this job has now completed (state=finished)
[2025-05-26 13:46:44] 2025-05-26 11:46:01,851 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-26 13:46:44] 2025-05-26 11:46:01,852 | INFO     | log transfer has been attempted: DONE
[2025-05-26 13:46:44] 2025-05-26 11:46:01,852 | INFO     | job 6665734053 has finished - writing final server update
[2025-05-26 13:46:44] 2025-05-26 11:46:01,852 | INFO     | total number of processed events: 400 (read)
[2025-05-26 13:46:44] 2025-05-26 11:46:01,853 | INFO     | executing command: lscpu
[2025-05-26 13:46:44] 2025-05-26 11:46:01,870 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 13:46:44] 2025-05-26 11:46:03,745 | INFO     | PID=886180 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-26 13:46:44] 2025-05-26 11:46:04,037 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-26 13:46:44] 2025-05-26 11:46:04,038 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665734053/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 13:46:44] 2025-05-26 11:46:04,038 | INFO     | extracted standard info from prmon json
[2025-05-26 13:46:44] 2025-05-26 11:46:04,038 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 13:46:44] 2025-05-26 11:46:04,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 13:46:44] 2025-05-26 11:46:04,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 13:46:44] 2025-05-26 11:46:04,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | fitting pss+swap vs Time
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | sum of square deviations: 233641590.0
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | sum of deviations: -6883923138.999999
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | mean x: 1748257065.0
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | mean y: 2380744.098901099
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | -- intersect: 51512333499.82927
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | intersect: 51512333499.82927
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | chi2: 0.0853593041090518
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | -- intersect: 51512333499.82927
[2025-05-26 13:46:44] 2025-05-26 11:46:04,039 | INFO     | current memory leak: -29.46 B/s (using 91 data points, chi2=0.09)
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | ..............................
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . Timing measurements:
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . get job = 0 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . initial setup = 1 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . payload setup = 3 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . stage-in = 0 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . payload execution = 5942 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . stage-out = 0 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | . log creation = 0 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,040 | INFO     | ..............................
[2025-05-26 13:46:44] 2025-05-26 11:46:04,363 | INFO     | 
[2025-05-26 13:46:44] 2025-05-26 11:46:04,363 | INFO     | job summary report
[2025-05-26 13:46:44] 2025-05-26 11:46:04,363 | INFO     | --------------------------------------------------
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | PanDA job id: 6665734053
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | task id: 44871837
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | errors: (none)
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | pilot state: finished 
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | transexitcode: 0
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | exeerrorcode: 0
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | exeerrordiag: 
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | exitcode: 0
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | exitmsg: OK
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | cpuconsumptiontime: 17207 s
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | nevents: 400
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | neventsw: 0
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | pid: 892666
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | pgrp: 892666
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | corecount: 3
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | event service: False
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | sizes: {0: 2393745, 2: 2393951, 11: 2393979, 5949: 2420754, 5950: 2429701, 5951: 2429757, 5955: 2430055}
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | --------------------------------------------------
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | 
[2025-05-26 13:46:44] 2025-05-26 11:46:04,364 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | job 6665734053 has completed (purged errors)
[2025-05-26 13:46:44] 2025-05-26 11:46:04,379 | INFO     | overall cleanup function is called
[2025-05-26 13:46:44] 2025-05-26 11:46:05,385 | INFO     | --- collectZombieJob: --- 10, [892666]
[2025-05-26 13:46:44] 2025-05-26 11:46:05,386 | INFO     | zombie collector waiting for pid 892666
[2025-05-26 13:46:44] 2025-05-26 11:46:05,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 13:46:44] 2025-05-26 11:46:05,386 | INFO     | collected zombie processes
[2025-05-26 13:46:44] 2025-05-26 11:46:05,386 | INFO     | will attempt to kill all subprocesses of pid=892666
[2025-05-26 13:46:44] 2025-05-26 11:46:05,426 | INFO     | process IDs to be killed: [892666] (in reverse order)
[2025-05-26 13:46:44] 2025-05-26 11:46:05,449 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 13:46:44] 2025-05-26 11:46:05,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 13:46:44] 2025-05-26 11:46:05,451 | INFO     | did not find any defunct processes belonging to 892666
[2025-05-26 13:46:44] 2025-05-26 11:46:05,452 | INFO     | did not find any defunct processes belonging to 892666
[2025-05-26 13:46:44] 2025-05-26 11:46:05,452 | INFO     | ready for new job
[2025-05-26 13:46:44] 2025-05-26 11:46:05,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 13:46:44] 2025-05-26 11:46:05,452 | INFO     | **************************************
[2025-05-26 13:46:44] 2025-05-26 11:46:05,452 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 13:46:44] 2025-05-26 11:46:05,453 | INFO     | **************************************
[2025-05-26 13:46:44] 2025-05-26 11:46:05,453 | INFO     | 
[2025-05-26 13:46:44] 2025-05-26 11:46:05,453 | INFO     | architecture information:
[2025-05-26 13:46:44] 2025-05-26 11:46:05,453 | INFO     | executing command: cat /etc/os-release
[2025-05-26 13:46:44] 2025-05-26 11:46:05,461 | INFO     | cat /etc/os-release:
[2025-05-26 13:46:44] NAME="CentOS Linux"
[2025-05-26 13:46:44] VERSION="7 (Core)"
[2025-05-26 13:46:44] ID="centos"
[2025-05-26 13:46:44] ID_LIKE="rhel fedora"
[2025-05-26 13:46:44] VERSION_ID="7"
[2025-05-26 13:46:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 13:46:44] ANSI_COLOR="0;31"
[2025-05-26 13:46:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 13:46:44] HOME_URL="https://www.centos.org/"
[2025-05-26 13:46:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 13:46:44] 
[2025-05-26 13:46:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 13:46:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 13:46:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 13:46:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 13:46:44] 
[2025-05-26 13:46:44] 2025-05-26 11:46:05,462 | INFO     | **************************************
[2025-05-26 13:46:44] 2025-05-26 11:46:05,965 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | INFO     | sufficient remaining disk space (323552804864 B)
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | INFO     | update_server=False
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 13:46:44] 2025-05-26 11:46:05,978 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 13:46:44] 2025-05-26 11:46:05,979 | INFO     | aborting loop
[2025-05-26 13:46:44] 2025-05-26 11:46:05,979 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 13:46:44] 2025-05-26 11:46:05,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 13:46:44] 2025-05-26 11:46:05,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 13:46:44] 2025-05-26 11:46:06,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 13:46:44] 2025-05-26 11:46:06,850 | INFO     | all payload control threads have been joined
[2025-05-26 13:46:44] 2025-05-26 11:46:06,851 | INFO     | all data control threads have been joined
[2025-05-26 13:46:44] 2025-05-26 11:46:06,984 | INFO     | [job] retrieve thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:06,984 | INFO     | [job] queue monitor thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:06,984 | INFO     | [job] job monitor thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:07,354 | INFO     | all job control threads have been joined
[2025-05-26 13:46:44] 2025-05-26 11:46:07,612 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:07,812 | INFO     | [data] copytool_in thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:07,856 | INFO     | [data] control thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:07,857 | INFO     | [payload] control thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,021 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,061 | INFO     | [payload] failed_post thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,360 | INFO     | [job] control thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,373 | INFO     | [job] validate thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,438 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,469 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,586 | INFO     | [payload] validate_post thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:08,736 | INFO     | [data] copytool_out thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:09,985 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 13:46:44] 2025-05-26 11:46:11,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571395913536)>', '<ExcThread(monitor, started 140570756364032)>']
[2025-05-26 13:46:44] 2025-05-26 11:46:12,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 13:46:44] 2025-05-26 11:46:12,011 | INFO     | [monitor] control thread has ended
[2025-05-26 13:46:44] 2025-05-26 11:46:16,215 | INFO     | all workflow threads have been joined
[2025-05-26 13:46:44] 2025-05-26 11:46:16,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 13:46:44] 2025-05-26 11:46:16,215 | INFO     | traces error code: 0
[2025-05-26 13:46:44] 2025-05-26 11:46:16,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 13:46:44] 2025-05-26 11:46:16,266 [wrapper] ==== pilot stdout END ====
[2025-05-26 13:46:44] 2025-05-26 11:46:16,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 13:46:44] 2025-05-26 11:46:16,271 [wrapper] pilotpid: 886180
[2025-05-26 13:46:44] 2025-05-26 11:46:16,273 [wrapper] Pilot exit status: 0
[2025-05-26 13:46:44] 2025-05-26 11:46:16,280 [wrapper] pandaids: 6665734053
[2025-05-26 13:46:44] 2025-05-26 11:46:16,295 [wrapper] cleanup supervisor_pilot  904873 886181
[2025-05-26 13:46:44] 2025-05-26 11:46:16,297 [wrapper] Test setup, not cleaning
[2025-05-26 13:46:44] 2025-05-26 11:46:16,300 [wrapper] apfmon messages muted
[2025-05-26 13:46:44] 2025-05-26 11:46:16,302 [wrapper] ==== wrapper stdout END ====
[2025-05-26 13:46:44] 2025-05-26 11:46:16,304 [wrapper] ==== wrapper stderr END ====
[2025-05-26 13:46:44]  *** Error codes and diagnostics ***
[2025-05-26 13:46:44]     "exeErrorCode": 0,
[2025-05-26 13:46:44]     "exeErrorDiag": "",
[2025-05-26 13:46:44]     "pilotErrorCode": 0,
[2025-05-26 13:46:44]     "pilotErrorDiag": "",
[2025-05-26 13:46:44]  *** Listing of results directory ***
[2025-05-26 13:46:44] total 423292
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc    495897 May 25 17:56 pilot3.tar.gz
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc      5111 May 25 18:08 queuedata.json
[2025-05-26 13:46:44] -rwx------ 1 boinc boinc     37140 May 25 18:09 runpilot2-wrapper.sh
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc       100 May 26 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 13:46:44] -rwxr-xr-x 1 boinc boinc      7986 May 26 12:06 run_atlas
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc       105 May 26 12:06 job.xml
[2025-05-26 13:46:44] -rw-r--r-- 2 boinc boinc 227401382 May 26 12:06 EVNT.44871834._001482.pool.root.1
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc      6923 May 26 12:06 init_data.xml
[2025-05-26 13:46:44] drwxrwx--x 2 boinc boinc      4096 May 26 12:06 shared
[2025-05-26 13:46:44] -rw-r--r-- 2 boinc boinc    508878 May 26 12:06 input.tar.gz
[2025-05-26 13:46:44] -rw-r--r-- 2 boinc boinc     15093 May 26 12:06 start_atlas.sh
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc         0 May 26 12:06 boinc_lockfile
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc      2560 May 26 12:06 pandaJob.out
[2025-05-26 13:46:44] -rw------- 1 boinc boinc    989949 May 26 12:06 agis_schedconf.cvmfs.json
[2025-05-26 13:46:44] -rw------- 1 boinc boinc   1596740 May 26 12:06 agis_ddmendpoints.agis.ALL.json
[2025-05-26 13:46:44] drwx------ 4 boinc boinc      4096 May 26 12:06 pilot3
[2025-05-26 13:46:44] -rw------- 1 boinc boinc 200579686 May 26 13:45 HITS.44871837._037170.pool.root.1
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc       530 May 26 13:45 boinc_task_state.xml
[2025-05-26 13:46:44] -rw------- 1 boinc boinc      1021 May 26 13:45 memory_monitor_summary.json
[2025-05-26 13:46:44] -rw------- 1 boinc boinc    253237 May 26 13:45 log.44871837._037170.job.log.tgz.1
[2025-05-26 13:46:44] -rw------- 1 boinc boinc        95 May 26 13:46 pilot_heartbeat.json
[2025-05-26 13:46:44] -rw------- 1 boinc boinc      7659 May 26 13:46 heartbeat.json
[2025-05-26 13:46:44] -rw------- 1 boinc boinc      4480 May 26 13:46 pilotlog.txt
[2025-05-26 13:46:44] -rw------- 1 boinc boinc    568821 May 26 13:46 log.44871837._037170.job.log.1
[2025-05-26 13:46:44] -rw------- 1 boinc boinc       357 May 26 13:46 output.list
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc       620 May 26 13:46 runtime_log
[2025-05-26 13:46:44] -rw------- 1 boinc boinc    839680 May 26 13:46 result.tar.gz
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc      8738 May 26 13:46 runtime_log.err
[2025-05-26 13:46:44] -rw------- 1 boinc boinc       660 May 26 13:46 YrpLDmd5Sd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmibUKDmTJpXsn.diag
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc      8192 May 26 13:46 boinc_mmap_file
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc        27 May 26 13:46 wrapper_checkpoint.txt
[2025-05-26 13:46:44] -rw-r--r-- 1 boinc boinc     21304 May 26 13:46 stderr.txt
[2025-05-26 13:46:44] HITS file was successfully produced:
[2025-05-26 13:46:44] -rw------- 1 boinc boinc 200579686 May 26 13:45 shared/HITS.pool.root.1
[2025-05-26 13:46:44]  *** Contents of shared directory: ***
[2025-05-26 13:46:44] total 419296
[2025-05-26 13:46:44] -rw-r--r-- 2 boinc boinc 227401382 May 26 12:06 ATLAS.root_0
[2025-05-26 13:46:44] -rw-r--r-- 2 boinc boinc    508878 May 26 12:06 input.tar.gz
[2025-05-26 13:46:44] -rw-r--r-- 2 boinc boinc     15093 May 26 12:06 start_atlas.sh
[2025-05-26 13:46:44] -rw------- 1 boinc boinc 200579686 May 26 13:45 HITS.pool.root.1
[2025-05-26 13:46:44] -rw------- 1 boinc boinc    839680 May 26 13:46 result.tar.gz
13:46:46 (882546): run_atlas exited; CPU time 17224.544213
13:46:46 (882546): called boinc_finish(0)

</stderr_txt>
]]>

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