Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:13 (27036): wrapper (7.7.26015): starting
06:03:13 (27036): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 06:03:13] Arguments: --nthreads 8
[2025-05-26 06:03:13] Threads: 8
[2025-05-26 06:03:13] Checking for CVMFS
[2025-05-26 06:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 06:03:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 06:03:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 06:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 06:03:16] 2.11.2.0 6410 19705 89924 146424 3 60 25154715 25165824 2680 130560 0 11661267 99.780 12850683 2275 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-26 06:03:16] CVMFS is ok
[2025-05-26 06:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 06:03:16] Checking for apptainer binary...
[2025-05-26 06:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 06:03:16] Running /usr/bin/apptainer --version
[2025-05-26 06:03:16] apptainer version 1.3.2-1.el7
[2025-05-26 06:03:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 06:33:36] cg-vwn284.simple-grid.lan
[2025-05-26 06:33:36] apptainer works
[2025-05-26 06:33:36] Set ATHENA_PROC_NUMBER=8
[2025-05-26 06:33:36] Set ATHENA_CORE_NUMBER=8
[2025-05-26 06:33:36] Starting ATLAS job with PandaID=6665733365
[2025-05-26 06:33:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 12:11:08]  *** The last 200 lines of the pilot log: ***
[2025-05-26 12:11:08] 2025-05-26 10:06:59,546 | INFO     | extracted standard info from prmon json
[2025-05-26 12:11:08] 2025-05-26 10:06:59,547 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 12:11:08] 2025-05-26 10:06:59,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 12:11:08] 2025-05-26 10:06:59,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 12:11:08] 2025-05-26 10:06:59,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 12:11:08] 2025-05-26 10:06:59,553 | INFO     | fitting pss+swap vs Time
[2025-05-26 12:11:08] 2025-05-26 10:06:59,554 | INFO     | sum of square deviations: 9691828230.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,557 | INFO     | sum of deviations: 74467653932.00002
[2025-05-26 12:11:08] 2025-05-26 10:06:59,557 | INFO     | mean x: 1748244290.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,558 | INFO     | mean y: 2468801.7206349205
[2025-05-26 12:11:08] 2025-05-26 10:06:59,558 | INFO     | -- intersect: -13430254899.813135
[2025-05-26 12:11:08] 2025-05-26 10:06:59,558 | INFO     | intersect: -13430254899.813135
[2025-05-26 12:11:08] 2025-05-26 10:06:59,558 | INFO     | chi2: 5.170712990668822
[2025-05-26 12:11:08] 2025-05-26 10:06:59,568 | INFO     | sum of square deviations: 9237596457.5
[2025-05-26 12:11:08] 2025-05-26 10:06:59,571 | INFO     | sum of deviations: 94073496273.5
[2025-05-26 12:11:08] 2025-05-26 10:06:59,571 | INFO     | mean x: 1748244137.5
[2025-05-26 12:11:08] 2025-05-26 10:06:59,572 | INFO     | mean y: 2475293.2612903225
[2025-05-26 12:11:08] 2025-05-26 10:06:59,572 | INFO     | -- intersect: -17801229286.272133
[2025-05-26 12:11:08] 2025-05-26 10:06:59,572 | INFO     | intersect: -17801229286.272133
[2025-05-26 12:11:08] 2025-05-26 10:06:59,572 | INFO     | chi2: 4.41847112596596
[2025-05-26 12:11:08] 2025-05-26 10:06:59,572 | INFO     | current chi2=4.41847112596596 (change=14.548126458776064 %)
[2025-05-26 12:11:08] 2025-05-26 10:06:59,572 | INFO     | right removable region: 309
[2025-05-26 12:11:08] 2025-05-26 10:06:59,573 | INFO     | sum of square deviations: 9237596457.5
[2025-05-26 12:11:08] 2025-05-26 10:06:59,582 | INFO     | sum of deviations: -25219708575.499992
[2025-05-26 12:11:08] 2025-05-26 10:06:59,582 | INFO     | mean x: 1748244442.5
[2025-05-26 12:11:08] 2025-05-26 10:06:59,582 | INFO     | mean y: 2502223.2225806452
[2025-05-26 12:11:08] 2025-05-26 10:06:59,582 | INFO     | -- intersect: 4775412098.798562
[2025-05-26 12:11:08] 2025-05-26 10:06:59,582 | INFO     | intersect: 4775412098.798562
[2025-05-26 12:11:08] 2025-05-26 10:06:59,583 | INFO     | chi2: 1.3392420117804056
[2025-05-26 12:11:08] 2025-05-26 10:06:59,583 | INFO     | current chi2=1.3392420117804056 (change=74.0994711136118 %)
[2025-05-26 12:11:08] 2025-05-26 10:06:59,584 | INFO     | sum of square deviations: 8797783560.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,593 | INFO     | sum of deviations: -49305071704.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,593 | INFO     | mean x: 1748244595.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,593 | INFO     | mean y: 2510512.104918033
[2025-05-26 12:11:08] 2025-05-26 10:06:59,593 | INFO     | -- intersect: 9800128801.387478
[2025-05-26 12:11:08] 2025-05-26 10:06:59,593 | INFO     | intersect: 9800128801.387478
[2025-05-26 12:11:08] 2025-05-26 10:06:59,594 | INFO     | chi2: 0.9381791013302129
[2025-05-26 12:11:08] 2025-05-26 10:06:59,594 | INFO     | current chi2=0.9381791013302129 (change=29.947007853869106 %)
[2025-05-26 12:11:08] 2025-05-26 10:06:59,594 | INFO     | sum of square deviations: 8372156975.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,597 | INFO     | sum of deviations: -43144557447.000015
[2025-05-26 12:11:08] 2025-05-26 10:06:59,598 | INFO     | mean x: 1748244747.5
[2025-05-26 12:11:08] 2025-05-26 10:06:59,598 | INFO     | mean y: 2508291.2066666665
[2025-05-26 12:11:08] 2025-05-26 10:06:59,598 | INFO     | -- intersect: 9011804959.336779
[2025-05-26 12:11:08] 2025-05-26 10:06:59,598 | INFO     | intersect: 9011804959.336779
[2025-05-26 12:11:08] 2025-05-26 10:06:59,598 | INFO     | chi2: 0.9215817014909887
[2025-05-26 12:11:08] 2025-05-26 10:06:59,598 | INFO     | current chi2=0.9215817014909887 (change=1.7691078191457523 %)
[2025-05-26 12:11:08] 2025-05-26 10:06:59,599 | INFO     | left removable region: 30
[2025-05-26 12:11:08] 2025-05-26 10:06:59,599 | INFO     | sum of square deviations: 6734191380.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,602 | INFO     | sum of deviations: 8688745144.999998
[2025-05-26 12:11:08] 2025-05-26 10:06:59,602 | INFO     | mean x: 1748245022.0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,602 | INFO     | mean y: 2503269.2365591396
[2025-05-26 12:11:08] 2025-05-26 10:06:59,602 | INFO     | -- intersect: -2253158114.5913706
[2025-05-26 12:11:08] 2025-05-26 10:06:59,603 | INFO     | intersect: -2253158114.5913706
[2025-05-26 12:11:08] 2025-05-26 10:06:59,603 | INFO     | chi2: 0.0009355243791927891
[2025-05-26 12:11:08] 2025-05-26 10:06:59,604 | INFO     | -- intersect: -2253158114.5913706
[2025-05-26 12:11:08] 2025-05-26 10:06:59,604 | INFO     | current memory leak: 1.29 B/s (using 279 data points, chi2=0.00)
[2025-05-26 12:11:08] 2025-05-26 10:06:59,605 | INFO     | ..............................
[2025-05-26 12:11:08] 2025-05-26 10:06:59,605 | INFO     | . Timing measurements:
[2025-05-26 12:11:08] 2025-05-26 10:06:59,605 | INFO     | . get job = 0 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,605 | INFO     | . initial setup = 7 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,605 | INFO     | . payload setup = 164 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,605 | INFO     | . stage-in = 0 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,605 | INFO     | . payload execution = 19352 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,606 | INFO     | . stage-out = 3 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,606 | INFO     | . log creation = 1 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,606 | INFO     | ..............................
[2025-05-26 12:11:08] 2025-05-26 10:06:59,796 | INFO     | 
[2025-05-26 12:11:08] 2025-05-26 10:06:59,796 | INFO     | job summary report
[2025-05-26 12:11:08] 2025-05-26 10:06:59,796 | INFO     | --------------------------------------------------
[2025-05-26 12:11:08] 2025-05-26 10:06:59,796 | INFO     | PanDA job id: 6665733365
[2025-05-26 12:11:08] 2025-05-26 10:06:59,796 | INFO     | task id: 44871837
[2025-05-26 12:11:08] 2025-05-26 10:06:59,796 | INFO     | errors: (none)
[2025-05-26 12:11:08] 2025-05-26 10:06:59,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | pilot state: finished 
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | transexitcode: 0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | exeerrorcode: 0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | exeerrordiag: 
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | exitcode: 0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | exitmsg: OK
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | cpuconsumptiontime: 72281 s
[2025-05-26 12:11:08] 2025-05-26 10:06:59,797 | INFO     | nevents: 400
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | neventsw: 0
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | pid: 22740
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | pgrp: 22740
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | corecount: 8
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | event service: False
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | sizes: {0: 2393515, 1: 2393770, 2: 2393770, 12: 2393798, 23: 2393826, 34: 2393854, 44: 2394010, 55: 2394038, 66: 2394066, 77: 2394094, 87: 2394150, 89: 2394664, 98
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | --------------------------------------------------
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | 
[2025-05-26 12:11:08] 2025-05-26 10:06:59,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-05-26 12:11:08] 2025-05-26 10:07:00,149 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,149 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,149 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,149 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,151 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 12:11:08] 2025-05-26 10:07:00,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 12:11:08] 2025-05-26 10:07:00,151 | INFO     | job 6665733365 has completed (purged errors)
[2025-05-26 12:11:08] 2025-05-26 10:07:00,152 | INFO     | overall cleanup function is called
[2025-05-26 12:11:08] 2025-05-26 10:07:01,161 | INFO     | --- collectZombieJob: --- 10, [22740]
[2025-05-26 12:11:08] 2025-05-26 10:07:01,161 | INFO     | zombie collector waiting for pid 22740
[2025-05-26 12:11:08] 2025-05-26 10:07:01,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 12:11:08] 2025-05-26 10:07:01,162 | INFO     | collected zombie processes
[2025-05-26 12:11:08] 2025-05-26 10:07:01,162 | INFO     | will attempt to kill all subprocesses of pid=22740
[2025-05-26 12:11:08] 2025-05-26 10:07:01,280 | INFO     | process IDs to be killed: [22740] (in reverse order)
[2025-05-26 12:11:08] 2025-05-26 10:07:02,047 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 12:11:08] 2025-05-26 10:07:02,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 12:11:08] 2025-05-26 10:07:02,051 | INFO     | did not find any defunct processes belonging to 22740
[2025-05-26 12:11:08] 2025-05-26 10:07:02,054 | INFO     | did not find any defunct processes belonging to 22740
[2025-05-26 12:11:08] 2025-05-26 10:07:02,054 | INFO     | ready for new job
[2025-05-26 12:11:08] 2025-05-26 10:07:02,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 12:11:08] 2025-05-26 10:07:02,056 | INFO     | **************************************
[2025-05-26 12:11:08] 2025-05-26 10:07:02,057 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 12:11:08] 2025-05-26 10:07:02,057 | INFO     | **************************************
[2025-05-26 12:11:08] 2025-05-26 10:07:02,057 | INFO     | 
[2025-05-26 12:11:08] 2025-05-26 10:07:02,058 | INFO     | pilot is running in a VM
[2025-05-26 12:11:08] 2025-05-26 10:07:02,058 | INFO     | architecture information:
[2025-05-26 12:11:08] 2025-05-26 10:07:02,061 | INFO     | executing command: cat /etc/os-release
[2025-05-26 12:11:08] 2025-05-26 10:07:02,286 | INFO     | cat /etc/os-release:
[2025-05-26 12:11:08] NAME="CentOS Linux"
[2025-05-26 12:11:08] VERSION="7 (Core)"
[2025-05-26 12:11:08] ID="centos"
[2025-05-26 12:11:08] ID_LIKE="rhel fedora"
[2025-05-26 12:11:08] VERSION_ID="7"
[2025-05-26 12:11:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 12:11:08] ANSI_COLOR="0;31"
[2025-05-26 12:11:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 12:11:08] HOME_URL="https://www.centos.org/"
[2025-05-26 12:11:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 12:11:08] 
[2025-05-26 12:11:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 12:11:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 12:11:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 12:11:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 12:11:08] 
[2025-05-26 12:11:08] 2025-05-26 10:07:02,287 | INFO     | **************************************
[2025-05-26 12:11:08] 2025-05-26 10:07:02,790 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-05-26 12:11:08] 2025-05-26 10:07:03,019 | INFO     | sufficient remaining disk space (493101252608 B)
[2025-05-26 12:11:08] 2025-05-26 10:07:03,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 12:11:08] 2025-05-26 10:07:03,019 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 12:11:08] 2025-05-26 10:07:03,019 | INFO     | update_server=False
[2025-05-26 12:11:08] 2025-05-26 10:07:03,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 12:11:08] 2025-05-26 10:07:03,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 12:11:08] 2025-05-26 10:07:03,020 | INFO     | aborting loop
[2025-05-26 12:11:08] 2025-05-26 10:07:03,021 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 12:11:08] 2025-05-26 10:07:03,021 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 12:11:08] 2025-05-26 10:07:03,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 12:11:08] 2025-05-26 10:07:03,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 12:11:08] 2025-05-26 10:07:03,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 12:11:08] 2025-05-26 10:07:03,687 | INFO     | all job control threads have been joined
[2025-05-26 12:11:08] 2025-05-26 10:07:03,857 | INFO     | all data control threads have been joined
[2025-05-26 12:11:08] 2025-05-26 10:07:04,025 | INFO     | [job] retrieve thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:04,028 | INFO     | [job] job monitor thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:04,369 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:04,466 | INFO     | all payload control threads have been joined
[2025-05-26 12:11:08] 2025-05-26 10:07:04,516 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:04,693 | INFO     | [job] control thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:04,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 12:11:08] 2025-05-26 10:07:04,862 | INFO     | [payload] validate_post thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:04,863 | INFO     | [data] control thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:04,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:05,035 | INFO     | [data] copytool_out thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:05,273 | INFO     | [payload] failed_post thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:05,322 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:05,337 | INFO     | [data] copytool_in thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:05,472 | INFO     | [payload] control thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:05,508 | INFO     | [job] validate thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:05,816 | INFO     | [job] queue monitor thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:06,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 12:11:08] 2025-05-26 10:07:10,186 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 12:11:08] 2025-05-26 10:07:11,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973197449024)>', '<ExcThread(monitor, started 139972757669632)>']
[2025-05-26 12:11:08] 2025-05-26 10:07:12,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 12:11:08] 2025-05-26 10:07:12,073 | INFO     | [monitor] control thread has ended
[2025-05-26 12:11:08] 2025-05-26 10:07:16,272 | INFO     | all workflow threads have been joined
[2025-05-26 12:11:08] 2025-05-26 10:07:16,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 12:11:08] 2025-05-26 10:07:16,273 | INFO     | traces error code: 0
[2025-05-26 12:11:08] 2025-05-26 10:07:16,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 12:11:08] 2025-05-26 10:07:16,604 [wrapper] ==== pilot stdout END ====
[2025-05-26 12:11:08] 2025-05-26 10:07:16,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 12:11:08] 2025-05-26 10:07:16,754 [wrapper] pilotpid: 16110
[2025-05-26 12:11:08] 2025-05-26 10:07:16,857 [wrapper] Pilot exit status: 0
[2025-05-26 12:11:08] 2025-05-26 10:07:17,300 [wrapper] pandaids: 6665733365
[2025-05-26 12:11:08] 2025-05-26 10:07:18,037 [wrapper] cleanup supervisor_pilot 23474 16111
[2025-05-26 12:11:08] 2025-05-26 10:07:18,149 [wrapper] Test setup, not cleaning
[2025-05-26 12:11:08] 2025-05-26 10:07:18,257 [wrapper] apfmon messages muted
[2025-05-26 12:11:08] 2025-05-26 10:07:18,342 [wrapper] ==== wrapper stdout END ====
[2025-05-26 12:11:08] 2025-05-26 10:07:18,427 [wrapper] ==== wrapper stderr END ====
[2025-05-26 12:11:08]  *** Error codes and diagnostics ***
[2025-05-26 12:11:08]     "exeErrorCode": 0,
[2025-05-26 12:11:08]     "exeErrorDiag": "",
[2025-05-26 12:11:08]     "pilotErrorCode": 0,
[2025-05-26 12:11:08]     "pilotErrorDiag": "",
[2025-05-26 12:11:08]  *** Listing of results directory ***
[2025-05-26 12:11:08] total 422440
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc    495897 May 25 17:39 pilot3.tar.gz
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc      5111 May 25 17:41 queuedata.json
[2025-05-26 12:11:08] -rwx------. 1 boinc boinc     37140 May 25 17:43 runpilot2-wrapper.sh
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc       100 May 26 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 12:11:08] -rwxr-xr-x. 1 boinc boinc      7986 May 26 06:03 run_atlas
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc       105 May 26 06:03 job.xml
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc      6372 May 26 06:03 init_data.xml
[2025-05-26 12:11:08] -rw-r--r--. 2 boinc boinc 225100536 May 26 06:03 EVNT.44871834._001467.pool.root.1
[2025-05-26 12:11:08] -rw-r--r--. 2 boinc boinc     15093 May 26 06:03 start_atlas.sh
[2025-05-26 12:11:08] drwxrwx--x. 2 boinc boinc        68 May 26 06:03 shared
[2025-05-26 12:11:08] -rw-r--r--. 2 boinc boinc    508877 May 26 06:03 input.tar.gz
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc         0 May 26 06:03 boinc_lockfile
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc      2559 May 26 06:33 pandaJob.out
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc    990811 May 26 06:36 agis_schedconf.cvmfs.json
[2025-05-26 12:11:08] drwx------. 4 boinc boinc      4096 May 26 06:36 pilot3
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc 199454010 May 26 12:04 HITS.44871837._036780.pool.root.1
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc       531 May 26 12:04 boinc_task_state.xml
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc      1017 May 26 12:05 memory_monitor_summary.json
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc   1596740 May 26 12:05 agis_ddmendpoints.agis.ALL.json
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc    428218 May 26 12:05 log.44871837._036780.job.log.tgz.1
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc        95 May 26 12:06 pilot_heartbeat.json
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc      7692 May 26 12:06 heartbeat.json
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc      4540 May 26 12:07 pilotlog.txt
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc   1676955 May 26 12:07 log.44871837._036780.job.log.1
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc       357 May 26 12:07 output.list
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc       620 May 26 12:07 runtime_log
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc   2119680 May 26 12:07 result.tar.gz
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc      8673 May 26 12:07 runtime_log.err
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc       658 May 26 12:07 MGWMDmsgSd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZXUKDmuTxwnn.diag
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc      8192 May 26 12:11 boinc_mmap_file
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc        28 May 26 12:11 wrapper_checkpoint.txt
[2025-05-26 12:11:08] -rw-r--r--. 1 boinc boinc     20520 May 26 12:11 stderr.txt
[2025-05-26 12:11:08] HITS file was successfully produced:
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc 199454010 May 26 12:04 shared/HITS.pool.root.1
[2025-05-26 12:11:08]  *** Contents of shared directory: ***
[2025-05-26 12:11:08] total 417196
[2025-05-26 12:11:08] -rw-r--r--. 2 boinc boinc 225100536 May 26 06:03 ATLAS.root_0
[2025-05-26 12:11:08] -rw-r--r--. 2 boinc boinc     15093 May 26 06:03 start_atlas.sh
[2025-05-26 12:11:08] -rw-r--r--. 2 boinc boinc    508877 May 26 06:03 input.tar.gz
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc 199454010 May 26 12:04 HITS.pool.root.1
[2025-05-26 12:11:08] -rw-------. 1 boinc boinc   2119680 May 26 12:07 result.tar.gz
12:11:10 (27036): run_atlas exited; CPU time 72558.110249
12:11:10 (27036): called boinc_finish(0)

</stderr_txt>
]]>

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