Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:51:41 (1914283): wrapper (7.7.26015): starting
16:51:41 (1914283): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 16:51:41] Arguments: --nthreads 8
[2025-05-25 16:51:41] Threads: 8
[2025-05-25 16:51:41] Checking for CVMFS
[2025-05-25 16:51:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 16:51:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 16:51:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 16:51:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 16:51:41] 2.12.6.0 7828 23413 479292 146413 1 520 31608723 32935936 26985 16776704 0 198125195 99.658 177225987 21618 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 16:51:41] CVMFS is ok
[2025-05-25 16:51:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 16:51:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 16:51:41] Further information can be found at the LHC@home message board.
[2025-05-25 16:51:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 16:51:41] Checking for apptainer binary...
[2025-05-25 16:51:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 16:51:41] Running /usr/bin/apptainer --version
[2025-05-25 16:51:42] apptainer version 1.4.1-1.el9
[2025-05-25 16:51:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 16:51:42] c7-3-29.aglt2.org
[2025-05-25 16:51:42] apptainer works
[2025-05-25 16:51:42] Set ATHENA_PROC_NUMBER=8
[2025-05-25 16:51:42] Set ATHENA_CORE_NUMBER=8
[2025-05-25 16:51:42] Starting ATLAS job with PandaID=6665732863
[2025-05-25 16:51:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 22:51:17]  *** The last 200 lines of the pilot log: ***
[2025-05-25 22:51:17] 2025-05-26 02:50:59,270 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 22:51:17] 2025-05-26 02:50:59,271 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665732863/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,271 | INFO     | extracted standard info from prmon json
[2025-05-25 22:51:17] 2025-05-26 02:50:59,271 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 22:51:17] 2025-05-26 02:50:59,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 22:51:17] 2025-05-26 02:50:59,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 22:51:17] 2025-05-26 02:50:59,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 22:51:17] 2025-05-26 02:50:59,277 | INFO     | fitting pss+swap vs Time
[2025-05-25 22:51:17] 2025-05-26 02:50:59,299 | INFO     | sum of square deviations: 13639372486.362568
[2025-05-25 22:51:17] 2025-05-26 02:50:59,302 | INFO     | sum of deviations: 11327187257.844208
[2025-05-25 22:51:17] 2025-05-26 02:50:59,302 | INFO     | mean x: 1748217097.0424929
[2025-05-25 22:51:17] 2025-05-26 02:50:59,302 | INFO     | mean y: 2095430.6770538243
[2025-05-25 22:51:17] 2025-05-26 02:50:59,327 | INFO     | -- intersect: -1449758930.318269
[2025-05-25 22:51:17] 2025-05-26 02:50:59,327 | INFO     | intersect: -1449758930.318269
[2025-05-25 22:51:17] 2025-05-26 02:50:59,327 | INFO     | chi2: 2.5515413262361233
[2025-05-25 22:51:17] 2025-05-26 02:50:59,328 | INFO     | sum of square deviations: 13067961696.353407
[2025-05-25 22:51:17] 2025-05-26 02:50:59,330 | INFO     | sum of deviations: 38030072707.06901
[2025-05-25 22:51:17] 2025-05-26 02:50:59,330 | INFO     | mean x: 1748216944.5431035
[2025-05-25 22:51:17] 2025-05-26 02:50:59,330 | INFO     | mean y: 2102492.528735632
[2025-05-25 22:51:17] 2025-05-26 02:50:59,330 | INFO     | -- intersect: -5085517065.405593
[2025-05-25 22:51:17] 2025-05-26 02:50:59,330 | INFO     | intersect: -5085517065.405593
[2025-05-25 22:51:17] 2025-05-26 02:50:59,354 | INFO     | chi2: 1.6988824377163405
[2025-05-25 22:51:17] 2025-05-26 02:50:59,354 | INFO     | current chi2=1.6988824377163405 (change=33.4174045998139 %)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,355 | INFO     | sum of square deviations: 12512737256.343973
[2025-05-25 22:51:17] 2025-05-26 02:50:59,357 | INFO     | sum of deviations: 35391626072.11081
[2025-05-25 22:51:17] 2025-05-26 02:50:59,357 | INFO     | mean x: 1748216792.0437317
[2025-05-25 22:51:17] 2025-05-26 02:50:59,357 | INFO     | mean y: 2101766.725947522
[2025-05-25 22:51:17] 2025-05-26 02:50:59,357 | INFO     | -- intersect: -4942638439.149275
[2025-05-25 22:51:17] 2025-05-26 02:50:59,357 | INFO     | intersect: -4942638439.149275
[2025-05-25 22:51:17] 2025-05-26 02:50:59,383 | INFO     | chi2: 1.6946711219296633
[2025-05-25 22:51:17] 2025-05-26 02:50:59,383 | INFO     | current chi2=1.6946711219296633 (change=0.24788741664421 %)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,383 | INFO     | right removable region: 342
[2025-05-25 22:51:17] 2025-05-26 02:50:59,383 | INFO     | sum of square deviations: 13067952546.353407
[2025-05-25 22:51:17] 2025-05-26 02:50:59,386 | INFO     | sum of deviations: -36505874861.69826
[2025-05-25 22:51:17] 2025-05-26 02:50:59,386 | INFO     | mean x: 1748217249.5431035
[2025-05-25 22:51:17] 2025-05-26 02:50:59,386 | INFO     | mean y: 2108126.146551724
[2025-05-25 22:51:17] 2025-05-26 02:50:59,386 | INFO     | -- intersect: 4885826514.050538
[2025-05-25 22:51:17] 2025-05-26 02:50:59,386 | INFO     | intersect: 4885826514.050538
[2025-05-25 22:51:17] 2025-05-26 02:50:59,408 | INFO     | chi2: 1.1216164986912878
[2025-05-25 22:51:17] 2025-05-26 02:50:59,408 | INFO     | current chi2=1.1216164986912878 (change=56.04160954955696 %)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,408 | INFO     | sum of square deviations: 12512718956.343973
[2025-05-25 22:51:17] 2025-05-26 02:50:59,433 | INFO     | sum of deviations: -30067896570.586006
[2025-05-25 22:51:17] 2025-05-26 02:50:59,433 | INFO     | mean x: 1748217402.0437317
[2025-05-25 22:51:17] 2025-05-26 02:50:59,434 | INFO     | mean y: 2106356.2390670553
[2025-05-25 22:51:17] 2025-05-26 02:50:59,434 | INFO     | -- intersect: 4203049429.518822
[2025-05-25 22:51:17] 2025-05-26 02:50:59,434 | INFO     | intersect: 4203049429.518822
[2025-05-25 22:51:17] 2025-05-26 02:50:59,434 | INFO     | chi2: 1.108831995794215
[2025-05-25 22:51:17] 2025-05-26 02:50:59,434 | INFO     | current chi2=1.108831995794215 (change=1.1398283559478533 %)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,434 | INFO     | left removable region: 20
[2025-05-25 22:51:17] 2025-05-26 02:50:59,434 | INFO     | sum of square deviations: 10352264479.801239
[2025-05-25 22:51:17] 2025-05-26 02:50:59,462 | INFO     | sum of deviations: 8803510751.652178
[2025-05-25 22:51:17] 2025-05-26 02:50:59,462 | INFO     | mean x: 1748217371.546584
[2025-05-25 22:51:17] 2025-05-26 02:50:59,462 | INFO     | mean y: 2108195.9565217393
[2025-05-25 22:51:17] 2025-05-26 02:50:59,462 | INFO     | -- intersect: -1484566575.2169204
[2025-05-25 22:51:17] 2025-05-26 02:50:59,463 | INFO     | intersect: -1484566575.2169204
[2025-05-25 22:51:17] 2025-05-26 02:50:59,463 | INFO     | chi2: 0.18026192868790555
[2025-05-25 22:51:17] 2025-05-26 02:50:59,463 | INFO     | -- intersect: -1484566575.2169204
[2025-05-25 22:51:17] 2025-05-26 02:50:59,463 | INFO     | current memory leak: 0.85 B/s (using 322 data points, chi2=0.18)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | ..............................
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . Timing measurements:
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . get job = 0 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . initial setup = 3 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . payload setup = 13 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . stage-in = 0 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . payload execution = 21480 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . stage-out = 4 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | . log creation = 0 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,464 | INFO     | ..............................
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | 
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | job summary report
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | --------------------------------------------------
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | PanDA job id: 6665732863
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | task id: 44871837
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | errors: (none)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | pilot state: finished 
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | transexitcode: 0
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | exeerrorcode: 0
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | exeerrordiag: 
[2025-05-25 22:51:17] 2025-05-26 02:50:59,638 | INFO     | exitcode: 0
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | exitmsg: OK
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | cpuconsumptiontime: 42119 s
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | nevents: 400
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | neventsw: 0
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | pid: 1929118
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | pgrp: 1929118
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | corecount: 8
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | event service: False
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | sizes: {0: 2393741, 8: 2393947, 11: 2393975, 21499: 2427389, 21504: 2436330, 21508: 2436386, 21521: 2436684}
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | --------------------------------------------------
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | 
[2025-05-25 22:51:17] 2025-05-26 02:50:59,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | job 6665732863 has completed (purged errors)
[2025-05-25 22:51:17] 2025-05-26 02:50:59,689 | INFO     | overall cleanup function is called
[2025-05-25 22:51:17] 2025-05-26 02:51:00,699 | INFO     | --- collectZombieJob: --- 10, [1929118]
[2025-05-25 22:51:17] 2025-05-26 02:51:00,699 | INFO     | zombie collector waiting for pid 1929118
[2025-05-25 22:51:17] 2025-05-26 02:51:00,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 22:51:17] 2025-05-26 02:51:00,699 | INFO     | collected zombie processes
[2025-05-25 22:51:17] 2025-05-26 02:51:00,699 | INFO     | will attempt to kill all subprocesses of pid=1929118
[2025-05-25 22:51:17] 2025-05-26 02:51:03,404 | INFO     | process IDs to be killed: [1929118] (in reverse order)
[2025-05-25 22:51:17] 2025-05-26 02:51:03,992 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 22:51:17] 2025-05-26 02:51:03,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 22:51:17] 2025-05-26 02:51:04,095 | INFO     | did not find any defunct processes belonging to 1929118
[2025-05-25 22:51:17] 2025-05-26 02:51:04,163 | INFO     | did not find any defunct processes belonging to 1929118
[2025-05-25 22:51:17] 2025-05-26 02:51:04,163 | INFO     | ready for new job
[2025-05-25 22:51:17] 2025-05-26 02:51:04,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 22:51:17] 2025-05-26 02:51:04,166 | INFO     | **************************************
[2025-05-25 22:51:17] 2025-05-26 02:51:04,166 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 22:51:17] 2025-05-26 02:51:04,166 | INFO     | **************************************
[2025-05-25 22:51:17] 2025-05-26 02:51:04,166 | INFO     | 
[2025-05-25 22:51:17] 2025-05-26 02:51:04,188 | INFO     | architecture information:
[2025-05-25 22:51:17] 2025-05-26 02:51:04,201 | INFO     | executing command: cat /etc/os-release
[2025-05-25 22:51:17] 2025-05-26 02:51:04,247 | INFO     | cat /etc/os-release:
[2025-05-25 22:51:17] NAME="CentOS Linux"
[2025-05-25 22:51:17] VERSION="7 (Core)"
[2025-05-25 22:51:17] ID="centos"
[2025-05-25 22:51:17] ID_LIKE="rhel fedora"
[2025-05-25 22:51:17] VERSION_ID="7"
[2025-05-25 22:51:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 22:51:17] ANSI_COLOR="0;31"
[2025-05-25 22:51:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 22:51:17] HOME_URL="https://www.centos.org/"
[2025-05-25 22:51:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 22:51:17] 
[2025-05-25 22:51:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 22:51:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 22:51:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 22:51:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 22:51:17] 
[2025-05-25 22:51:17] 2025-05-26 02:51:04,247 | INFO     | **************************************
[2025-05-25 22:51:17] 2025-05-26 02:51:04,774 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 22:51:17] 2025-05-26 02:51:04,827 | INFO     | sufficient remaining disk space (73869033472 B)
[2025-05-25 22:51:17] 2025-05-26 02:51:04,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 22:51:17] 2025-05-26 02:51:04,828 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 22:51:17] 2025-05-26 02:51:04,828 | INFO     | update_server=False
[2025-05-25 22:51:17] 2025-05-26 02:51:04,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 22:51:17] 2025-05-26 02:51:04,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 22:51:17] 2025-05-26 02:51:04,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 22:51:17] 2025-05-26 02:51:05,007 | INFO     | all job control threads have been joined
[2025-05-25 22:51:17] 2025-05-26 02:51:05,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 22:51:17] 2025-05-26 02:51:05,084 | INFO     | aborting loop
[2025-05-25 22:51:17] 2025-05-26 02:51:05,303 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 22:51:17] 2025-05-26 02:51:05,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 22:51:17] 2025-05-26 02:51:05,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 22:51:17] 2025-05-26 02:51:05,510 | INFO     | all data control threads have been joined
[2025-05-25 22:51:17] 2025-05-26 02:51:05,832 | INFO     | all payload control threads have been joined
[2025-05-25 22:51:17] 2025-05-26 02:51:05,833 | INFO     | [job] retrieve thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:05,836 | INFO     | [job] queue monitor thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:05,962 | INFO     | [job] validate thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:05,962 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,013 | INFO     | [job] control thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,090 | INFO     | [job] job monitor thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,170 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,177 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 22:51:17] 2025-05-26 02:51:06,525 | INFO     | [data] control thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,589 | INFO     | [payload] failed_post thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,589 | INFO     | [payload] validate_post thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,838 | INFO     | [payload] control thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:06,863 | INFO     | [data] copytool_out thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:07,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:07,154 | INFO     | [data] copytool_in thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:10,226 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 22:51:17] 2025-05-26 02:51:10,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873001228096)>', '<ExcThread(monitor, started 139872379594496)>']
[2025-05-25 22:51:17] 2025-05-26 02:51:11,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 22:51:17] 2025-05-26 02:51:11,344 | INFO     | [monitor] control thread has ended
[2025-05-25 22:51:17] 2025-05-26 02:51:16,000 | INFO     | all workflow threads have been joined
[2025-05-25 22:51:17] 2025-05-26 02:51:16,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 22:51:17] 2025-05-26 02:51:16,000 | INFO     | traces error code: 0
[2025-05-25 22:51:17] 2025-05-26 02:51:16,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 22:51:17] 2025-05-26 02:51:16,598 [wrapper] ==== pilot stdout END ====
[2025-05-25 22:51:17] 2025-05-26 02:51:16,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 22:51:17] 2025-05-26 02:51:16,609 [wrapper] pilotpid: 1919705
[2025-05-25 22:51:17] 2025-05-26 02:51:16,627 [wrapper] Pilot exit status: 0
[2025-05-25 22:51:17] 2025-05-26 02:51:16,660 [wrapper] pandaids: 6665732863
[2025-05-25 22:51:17] 2025-05-26 02:51:16,850 [wrapper] cleanup supervisor_pilot 1990132 1919706
[2025-05-25 22:51:17] 2025-05-26 02:51:16,859 [wrapper] Test setup, not cleaning
[2025-05-25 22:51:17] 2025-05-26 02:51:16,865 [wrapper] apfmon messages muted
[2025-05-25 22:51:17] 2025-05-26 02:51:16,868 [wrapper] ==== wrapper stdout END ====
[2025-05-25 22:51:17] 2025-05-26 02:51:16,874 [wrapper] ==== wrapper stderr END ====
[2025-05-25 22:51:17]  *** Error codes and diagnostics ***
[2025-05-25 22:51:17]     "exeErrorCode": 0,
[2025-05-25 22:51:17]     "exeErrorDiag": "",
[2025-05-25 22:51:17]     "pilotErrorCode": 0,
[2025-05-25 22:51:17]     "pilotErrorDiag": "",
[2025-05-25 22:51:17]  *** Listing of results directory ***
[2025-05-25 22:51:17] total 425996
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas    495897 May 25 10:50 pilot3.tar.gz
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas      5111 May 25 11:18 queuedata.json
[2025-05-25 22:51:17] -rwx------. 1 boincer umatlas     37140 May 25 11:19 runpilot2-wrapper.sh
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas       100 May 25 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 22:51:17] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 16:51 run_atlas
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas       105 May 25 16:51 job.xml
[2025-05-25 22:51:17] -rw-r--r--. 2 boincer umatlas 223171139 May 25 16:51 EVNT.44871834._001458.pool.root.1
[2025-05-25 22:51:17] -rw-r--r--. 2 boincer umatlas    508882 May 25 16:51 input.tar.gz
[2025-05-25 22:51:17] -rw-r--r--. 2 boincer umatlas     15093 May 25 16:51 start_atlas.sh
[2025-05-25 22:51:17] drwxrwx--x. 2 boincer umatlas      4096 May 25 16:51 shared
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas         0 May 25 16:51 boinc_lockfile
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas      2559 May 25 16:51 pandaJob.out
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas    990803 May 25 16:51 agis_schedconf.cvmfs.json
[2025-05-25 22:51:17] drwx------. 4 boincer umatlas      4096 May 25 16:51 pilot3
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas      6934 May 25 22:46 init_data.xml
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas 204867429 May 25 22:50 HITS.44871837._036551.pool.root.1
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas       531 May 25 22:50 boinc_task_state.xml
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas      1048 May 25 22:50 memory_monitor_summary.json
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas        95 May 25 22:50 pilot_heartbeat.json
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas   1596740 May 25 22:50 agis_ddmendpoints.agis.ALL.json
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas    445242 May 25 22:50 log.44871837._036551.job.log.tgz.1
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas      7714 May 25 22:50 heartbeat.json
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas        28 May 25 22:51 wrapper_checkpoint.txt
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas      8192 May 25 22:51 boinc_mmap_file
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas      4353 May 25 22:51 pilotlog.txt
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas   1730462 May 25 22:51 log.44871837._036551.job.log.1
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas       357 May 25 22:51 output.list
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas       620 May 25 22:51 runtime_log
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas   2191360 May 25 22:51 result.tar.gz
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas      8655 May 25 22:51 runtime_log.err
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas       659 May 25 22:51 69zNDmvJSd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfTUKDmq8TE7m.diag
[2025-05-25 22:51:17] -rw-r--r--. 1 boincer umatlas     20888 May 25 22:51 stderr.txt
[2025-05-25 22:51:17] HITS file was successfully produced:
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas 204867429 May 25 22:50 shared/HITS.pool.root.1
[2025-05-25 22:51:17]  *** Contents of shared directory: ***
[2025-05-25 22:51:17] total 420676
[2025-05-25 22:51:17] -rw-r--r--. 2 boincer umatlas 223171139 May 25 16:51 ATLAS.root_0
[2025-05-25 22:51:17] -rw-r--r--. 2 boincer umatlas    508882 May 25 16:51 input.tar.gz
[2025-05-25 22:51:17] -rw-r--r--. 2 boincer umatlas     15093 May 25 16:51 start_atlas.sh
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas 204867429 May 25 22:50 HITS.pool.root.1
[2025-05-25 22:51:17] -rw-------. 1 boincer umatlas   2191360 May 25 22:51 result.tar.gz
22:51:18 (1914283): run_atlas exited; CPU time 43039.089373
22:51:18 (1914283): called boinc_finish(0)

</stderr_txt>
]]>

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