Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:40:49 (443421): wrapper (7.7.26015): starting
10:40:49 (443421): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 10:40:49] Arguments: --nthreads 4
[2025-05-28 10:40:49] Threads: 4
[2025-05-28 10:40:49] Checking for CVMFS
[2025-05-28 10:40:49] No cvmfs_config command found, will try listing directly
[2025-05-28 10:40:49] CVMFS is ok
[2025-05-28 10:40:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 10:40:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 10:40:49] Further information can be found at the LHC@home message board.
[2025-05-28 10:40:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 10:40:49] Checking for apptainer binary...
[2025-05-28 10:40:49] which: no apptainer in ((null))
[2025-05-28 10:40:49] apptainer is not installed, using version from CVMFS
[2025-05-28 10:40:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 10:40:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-05-28 10:40:50] apptainer works
[2025-05-28 10:40:50] Set ATHENA_PROC_NUMBER=4
[2025-05-28 10:40:50] Set ATHENA_CORE_NUMBER=4
[2025-05-28 10:40:50] Starting ATLAS job with PandaID=6665720897
[2025-05-28 10:40:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 14:41:41]  *** The last 200 lines of the pilot log: ***
[2025-05-28 14:41:41] 2025-05-28 12:41:17,477 | INFO     | executing command: lscpu
[2025-05-28 14:41:41] 2025-05-28 12:41:17,544 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-28 14:41:41] 2025-05-28 12:41:18,518 | INFO     | monitor loop #1036: job 0:6665720897 is in state 'finished'
[2025-05-28 14:41:41] 2025-05-28 12:41:18,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 14:41:41] 2025-05-28 12:41:21,022 | INFO     | monitor loop #1037: job 0:6665720897 is in state 'finished'
[2025-05-28 14:41:41] 2025-05-28 12:41:21,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,142 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 14:41:41] 2025-05-28 12:41:22,142 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6665720897/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,143 | INFO     | extracted standard info from prmon json
[2025-05-28 14:41:41] 2025-05-28 12:41:22,144 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 14:41:41] 2025-05-28 12:41:22,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 14:41:41] 2025-05-28 12:41:22,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 14:41:41] 2025-05-28 12:41:22,144 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 14:41:41] 2025-05-28 12:41:22,149 | INFO     | fitting pss+swap vs Time
[2025-05-28 14:41:41] 2025-05-28 12:41:22,150 | INFO     | sum of square deviations: 4075741535.0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,151 | INFO     | sum of deviations: -11201102216.500002
[2025-05-28 14:41:41] 2025-05-28 12:41:22,151 | INFO     | mean x: 1748428860.5
[2025-05-28 14:41:41] 2025-05-28 12:41:22,152 | INFO     | mean y: 2343225.4025423727
[2025-05-28 14:41:41] 2025-05-28 12:41:22,152 | INFO     | -- intersect: 4807439480.049888
[2025-05-28 14:41:41] 2025-05-28 12:41:22,152 | INFO     | intersect: 4807439480.049888
[2025-05-28 14:41:41] 2025-05-28 12:41:22,152 | INFO     | chi2: 1.8404779969917144
[2025-05-28 14:41:41] 2025-05-28 12:41:22,153 | INFO     | sum of square deviations: 3822136780.0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,154 | INFO     | sum of deviations: -11084593894.000004
[2025-05-28 14:41:41] 2025-05-28 12:41:22,154 | INFO     | mean x: 1748428708.0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,154 | INFO     | mean y: 2343295.510822511
[2025-05-28 14:41:41] 2025-05-28 12:41:22,154 | INFO     | -- intersect: 5072968261.682524
[2025-05-28 14:41:41] 2025-05-28 12:41:22,155 | INFO     | intersect: 5072968261.682524
[2025-05-28 14:41:41] 2025-05-28 12:41:22,155 | INFO     | chi2: 1.839167461456561
[2025-05-28 14:41:41] 2025-05-28 12:41:22,155 | INFO     | current chi2=1.839167461456561 (change=0.07120625931391553 %)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,155 | INFO     | right removable region: 230
[2025-05-28 14:41:41] 2025-05-28 12:41:22,155 | INFO     | sum of square deviations: 3822136780.0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,157 | INFO     | sum of deviations: -45193355358.0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,157 | INFO     | mean x: 1748429013.0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,157 | INFO     | mean y: 2363463.7445887444
[2025-05-28 14:41:41] 2025-05-28 12:41:22,157 | INFO     | -- intersect: 20675975699.76357
[2025-05-28 14:41:41] 2025-05-28 12:41:22,157 | INFO     | intersect: 20675975699.76357
[2025-05-28 14:41:41] 2025-05-28 12:41:22,158 | INFO     | chi2: 0.32805113670992003
[2025-05-28 14:41:41] 2025-05-28 12:41:22,158 | INFO     | current chi2=0.32805113670992003 (change=82.17576427177484 %)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,158 | INFO     | sum of square deviations: 3579276412.5
[2025-05-28 14:41:41] 2025-05-28 12:41:22,160 | INFO     | sum of deviations: -36203563867.00001
[2025-05-28 14:41:41] 2025-05-28 12:41:22,160 | INFO     | mean x: 1748429165.5
[2025-05-28 14:41:41] 2025-05-28 12:41:22,160 | INFO     | mean y: 2357801.592920354
[2025-05-28 14:41:41] 2025-05-28 12:41:22,160 | INFO     | -- intersect: 17687319694.740585
[2025-05-28 14:41:41] 2025-05-28 12:41:22,160 | INFO     | intersect: 17687319694.740585
[2025-05-28 14:41:41] 2025-05-28 12:41:22,161 | INFO     | chi2: 0.2984982808932098
[2025-05-28 14:41:41] 2025-05-28 12:41:22,161 | INFO     | current chi2=0.2984982808932098 (change=9.008612533125415 %)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,161 | INFO     | left removable region: 20
[2025-05-28 14:41:41] 2025-05-28 12:41:22,161 | INFO     | sum of square deviations: 2871616632.5
[2025-05-28 14:41:41] 2025-05-28 12:41:22,162 | INFO     | sum of deviations: -12239228551.0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,162 | INFO     | mean x: 1748429287.5
[2025-05-28 14:41:41] 2025-05-28 12:41:22,163 | INFO     | mean y: 2341797.3619047618
[2025-05-28 14:41:41] 2025-05-28 12:41:22,163 | INFO     | -- intersect: 7454390031.371634
[2025-05-28 14:41:41] 2025-05-28 12:41:22,163 | INFO     | intersect: 7454390031.371634
[2025-05-28 14:41:41] 2025-05-28 12:41:22,163 | INFO     | chi2: 0.14095282519534608
[2025-05-28 14:41:41] 2025-05-28 12:41:22,163 | INFO     | -- intersect: 7454390031.371634
[2025-05-28 14:41:41] 2025-05-28 12:41:22,163 | INFO     | current memory leak: -4.26 B/s (using 210 data points, chi2=0.14)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | ..............................
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | . Timing measurements:
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | . get job = 0 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | . initial setup = 1 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | . payload setup = 9 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | . stage-in = 0 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | . payload execution = 14384 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,164 | INFO     | . stage-out = 1 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,165 | INFO     | . log creation = 0 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,165 | INFO     | ..............................
[2025-05-28 14:41:41] 2025-05-28 12:41:22,467 | INFO     | 
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | job summary report
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | --------------------------------------------------
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | PanDA job id: 6665720897
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | task id: 44871837
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | errors: (none)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | pilot state: finished 
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | transexitcode: 0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | exeerrorcode: 0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,468 | INFO     | exeerrordiag: 
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | exitcode: 0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | exitmsg: OK
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | cpuconsumptiontime: 55307 s
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | nevents: 400
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | neventsw: 0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | pid: 455326
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | pgrp: 455326
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | corecount: 4
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | event service: False
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | sizes: {0: 2405245, 5: 2405451, 11: 2405507, 14397: 2435863, 14399: 2444882, 14406: 2444996}
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | --------------------------------------------------
[2025-05-28 14:41:41] 2025-05-28 12:41:22,469 | INFO     | 
[2025-05-28 14:41:41] 2025-05-28 12:41:22,470 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-05-28 14:41:41] 2025-05-28 12:41:22,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,491 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,491 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,493 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,493 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 14:41:41] 2025-05-28 12:41:22,493 | INFO     | job 6665720897 has completed (purged errors)
[2025-05-28 14:41:41] 2025-05-28 12:41:22,493 | INFO     | overall cleanup function is called
[2025-05-28 14:41:41] 2025-05-28 12:41:23,500 | INFO     | --- collectZombieJob: --- 10, [455326]
[2025-05-28 14:41:41] 2025-05-28 12:41:23,501 | INFO     | zombie collector waiting for pid 455326
[2025-05-28 14:41:41] 2025-05-28 12:41:23,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 14:41:41] 2025-05-28 12:41:23,501 | INFO     | collected zombie processes
[2025-05-28 14:41:41] 2025-05-28 12:41:23,501 | INFO     | will attempt to kill all subprocesses of pid=455326
[2025-05-28 14:41:41] 2025-05-28 12:41:23,833 | INFO     | process IDs to be killed: [455326] (in reverse order)
[2025-05-28 14:41:41] 2025-05-28 12:41:23,941 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 14:41:41] 2025-05-28 12:41:23,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 14:41:41] 2025-05-28 12:41:23,951 | INFO     | did not find any defunct processes belonging to 455326
[2025-05-28 14:41:41] 2025-05-28 12:41:23,960 | INFO     | did not find any defunct processes belonging to 455326
[2025-05-28 14:41:41] 2025-05-28 12:41:23,960 | INFO     | ready for new job
[2025-05-28 14:41:41] 2025-05-28 12:41:23,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 14:41:41] 2025-05-28 12:41:23,962 | INFO     | **************************************
[2025-05-28 14:41:41] 2025-05-28 12:41:23,962 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 14:41:41] 2025-05-28 12:41:23,962 | INFO     | **************************************
[2025-05-28 14:41:41] 2025-05-28 12:41:23,962 | INFO     | 
[2025-05-28 14:41:41] 2025-05-28 12:41:23,966 | INFO     | architecture information:
[2025-05-28 14:41:41] 2025-05-28 12:41:23,966 | INFO     | executing command: cat /etc/os-release
[2025-05-28 14:41:41] 2025-05-28 12:41:23,984 | INFO     | cat /etc/os-release:
[2025-05-28 14:41:41] NAME="CentOS Linux"
[2025-05-28 14:41:41] VERSION="7 (Core)"
[2025-05-28 14:41:41] ID="centos"
[2025-05-28 14:41:41] ID_LIKE="rhel fedora"
[2025-05-28 14:41:41] VERSION_ID="7"
[2025-05-28 14:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 14:41:41] ANSI_COLOR="0;31"
[2025-05-28 14:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 14:41:41] HOME_URL="https://www.centos.org/"
[2025-05-28 14:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 14:41:41] 
[2025-05-28 14:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 14:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 14:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 14:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 14:41:41] 
[2025-05-28 14:41:41] 2025-05-28 12:41:23,984 | INFO     | **************************************
[2025-05-28 14:41:41] 2025-05-28 12:41:24,487 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-05-28 14:41:41] 2025-05-28 12:41:24,508 | INFO     | sufficient remaining disk space (672511557632 B)
[2025-05-28 14:41:41] 2025-05-28 12:41:24,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 14:41:41] 2025-05-28 12:41:24,508 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 14:41:41] 2025-05-28 12:41:24,508 | INFO     | update_server=False
[2025-05-28 14:41:41] 2025-05-28 12:41:24,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 14:41:41] 2025-05-28 12:41:24,509 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 14:41:41] 2025-05-28 12:41:24,509 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 14:41:41] 2025-05-28 12:41:24,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 14:41:41] 2025-05-28 12:41:24,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 14:41:41] 2025-05-28 12:41:24,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:41:41] 2025-05-28 12:41:24,531 | INFO     | aborting loop
[2025-05-28 14:41:41] 2025-05-28 12:41:25,075 | INFO     | all data control threads have been joined
[2025-05-28 14:41:41] 2025-05-28 12:41:25,112 | INFO     | all payload control threads have been joined
[2025-05-28 14:41:41] 2025-05-28 12:41:25,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 14:41:41] 2025-05-28 12:41:25,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 14:41:41] 2025-05-28 12:41:25,514 | INFO     | [job] retrieve thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:25,518 | INFO     | all job control threads have been joined
[2025-05-28 14:41:41] 2025-05-28 12:41:25,536 | INFO     | [job] job monitor thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:25,608 | INFO     | [data] copytool_in thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:25,856 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:25,981 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:26,081 | INFO     | [data] control thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:26,118 | INFO     | [payload] control thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:26,524 | INFO     | [job] control thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:26,590 | INFO     | [payload] failed_post thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:26,834 | INFO     | [job] validate thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:26,921 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:27,085 | INFO     | [payload] validate_post thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:27,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:41:41] 2025-05-28 12:41:27,401 | INFO     | [data] copytool_out thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:28,282 | INFO     | [job] queue monitor thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:29,499 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:34,706 | INFO     | job.realtimelogging is not enabled
[2025-05-28 14:41:41] 2025-05-28 12:41:35,711 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 14:41:41] 2025-05-28 12:41:36,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23067128837952)>', '<ExcThread(monitor, started 23066880980736)>']
[2025-05-28 14:41:41] 2025-05-28 12:41:36,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 14:41:41] 2025-05-28 12:41:36,570 | INFO     | [monitor] control thread has ended
[2025-05-28 14:41:41] 2025-05-28 12:41:41,343 | INFO     | all workflow threads have been joined
[2025-05-28 14:41:41] 2025-05-28 12:41:41,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 14:41:41] 2025-05-28 12:41:41,344 | INFO     | traces error code: 0
[2025-05-28 14:41:41] 2025-05-28 12:41:41,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 14:41:41] 2025-05-28 12:41:41,472 [wrapper] ==== pilot stdout END ====
[2025-05-28 14:41:41] 2025-05-28 12:41:41,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 14:41:41] 2025-05-28 12:41:41,478 [wrapper] pilotpid: 447374
[2025-05-28 14:41:41] 2025-05-28 12:41:41,481 [wrapper] Pilot exit status: 0
[2025-05-28 14:41:41] 2025-05-28 12:41:41,492 [wrapper] pandaids: 6665720897
[2025-05-28 14:41:41] 2025-05-28 12:41:41,549 [wrapper] cleanup supervisor_pilot 1091407 447375
[2025-05-28 14:41:41] 2025-05-28 12:41:41,552 [wrapper] Test setup, not cleaning
[2025-05-28 14:41:41] 2025-05-28 12:41:41,555 [wrapper] apfmon messages muted
[2025-05-28 14:41:41] 2025-05-28 12:41:41,558 [wrapper] ==== wrapper stdout END ====
[2025-05-28 14:41:41] 2025-05-28 12:41:41,561 [wrapper] ==== wrapper stderr END ====
[2025-05-28 14:41:41]  *** Error codes and diagnostics ***
[2025-05-28 14:41:41]     "exeErrorCode": 0,
[2025-05-28 14:41:41]     "exeErrorDiag": "",
[2025-05-28 14:41:41]     "pilotErrorCode": 0,
[2025-05-28 14:41:41]     "pilotErrorDiag": "",
[2025-05-28 14:41:41]  *** Listing of results directory ***
[2025-05-28 14:41:41] total 411760
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc    495897 May 25 09:40 pilot3.tar.gz
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc      5111 May 25 09:41 queuedata.json
[2025-05-28 14:41:41] -rwx------ 1 boinc boinc     37140 May 25 09:43 runpilot2-wrapper.sh
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc       100 May 28 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 14:41:41] -rwxr-xr-x 1 boinc boinc      7986 May 28 10:40 run_atlas
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc       105 May 28 10:40 job.xml
[2025-05-28 14:41:41] -rw-r--r-- 2 boinc boinc 223649406 May 28 10:40 EVNT.44871834._001248.pool.root.1
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc      6636 May 28 10:40 init_data.xml
[2025-05-28 14:41:41] -rw-r--r-- 2 boinc boinc     15093 May 28 10:40 start_atlas.sh
[2025-05-28 14:41:41] drwxrwx--x 2 boinc boinc      4096 May 28 10:40 shared
[2025-05-28 14:41:41] -rw-r--r-- 2 boinc boinc    508879 May 28 10:40 input.tar.gz
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc         0 May 28 10:40 boinc_lockfile
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc      2559 May 28 10:40 pandaJob.out
[2025-05-28 14:41:41] -rw------- 1 boinc boinc    991351 May 28 10:40 agis_schedconf.cvmfs.json
[2025-05-28 14:41:41] drwx------ 4 boinc boinc      4096 May 28 10:41 pilot3
[2025-05-28 14:41:41] -rw------- 1 boinc boinc        95 May 28 14:40 pilot_heartbeat.json
[2025-05-28 14:41:41] -rw------- 1 boinc boinc 190802063 May 28 14:40 HITS.44871837._031317.pool.root.1
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc       531 May 28 14:40 boinc_task_state.xml
[2025-05-28 14:41:41] -rw------- 1 boinc boinc      1033 May 28 14:41 memory_monitor_summary.json
[2025-05-28 14:41:41] -rw------- 1 boinc boinc   1603667 May 28 14:41 agis_ddmendpoints.agis.ALL.json
[2025-05-28 14:41:41] -rw------- 1 boinc boinc    349134 May 28 14:41 log.44871837._031317.job.log.tgz.1
[2025-05-28 14:41:41] -rw------- 1 boinc boinc      7726 May 28 14:41 heartbeat.json
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc      8192 May 28 14:41 boinc_mmap_file
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc        28 May 28 14:41 wrapper_checkpoint.txt
[2025-05-28 14:41:41] -rw------- 1 boinc boinc      4558 May 28 14:41 pilotlog.txt
[2025-05-28 14:41:41] -rw------- 1 boinc boinc   1323245 May 28 14:41 log.44871837._031317.job.log.1
[2025-05-28 14:41:41] -rw------- 1 boinc boinc       357 May 28 14:41 output.list
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc       620 May 28 14:41 runtime_log
[2025-05-28 14:41:41] -rw------- 1 boinc boinc   1689600 May 28 14:41 result.tar.gz
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc      9026 May 28 14:41 runtime_log.err
[2025-05-28 14:41:41] -rw------- 1 boinc boinc       665 May 28 14:41 12NMDmqBLd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4iTKDm7F1rIn.diag
[2025-05-28 14:41:41] -rw-r--r-- 1 boinc boinc     20882 May 28 14:41 stderr.txt
[2025-05-28 14:41:41] HITS file was successfully produced:
[2025-05-28 14:41:41] -rw------- 1 boinc boinc 190802063 May 28 14:40 shared/HITS.pool.root.1
[2025-05-28 14:41:41]  *** Contents of shared directory: ***
[2025-05-28 14:41:41] total 406916
[2025-05-28 14:41:41] -rw-r--r-- 2 boinc boinc 223649406 May 28 10:40 ATLAS.root_0
[2025-05-28 14:41:41] -rw-r--r-- 2 boinc boinc     15093 May 28 10:40 start_atlas.sh
[2025-05-28 14:41:41] -rw-r--r-- 2 boinc boinc    508879 May 28 10:40 input.tar.gz
[2025-05-28 14:41:41] -rw------- 1 boinc boinc 190802063 May 28 14:40 HITS.pool.root.1
[2025-05-28 14:41:41] -rw------- 1 boinc boinc   1689600 May 28 14:41 result.tar.gz
14:41:43 (443421): run_atlas exited; CPU time 55807.423918
14:41:43 (443421): called boinc_finish(0)

</stderr_txt>
]]>

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