Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:16:33 (2168592): wrapper (7.7.26015): starting
00:16:33 (2168592): wrapper: running run_atlas (--nthreads 4)
[2025-05-26 00:16:33] Arguments: --nthreads 4
[2025-05-26 00:16:33] Threads: 4
[2025-05-26 00:16:33] Checking for CVMFS
[2025-05-26 00:16:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 00:16:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 00:16:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 00:16:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 00:16:35] 2.12.7.0 16584 2314 50132 146417 4 3 6881586 10240001 1822 130560 0 5995808 99.997 758458 630 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-05-26 00:16:35] CVMFS is ok
[2025-05-26 00:16:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 00:16:35] Checking for apptainer binary...
[2025-05-26 00:16:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 00:16:35] Running /usr/bin/apptainer --version
[2025-05-26 00:16:35] apptainer version 1.3.4
[2025-05-26 00:16:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 00:16:35] diegovlneu
[2025-05-26 00:16:35] apptainer works
[2025-05-26 00:16:35] Set ATHENA_PROC_NUMBER=4
[2025-05-26 00:16:35] Set ATHENA_CORE_NUMBER=4
[2025-05-26 00:16:35] Starting ATLAS job with PandaID=6665722038
[2025-05-26 00:16:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 01:25:32]  *** The last 200 lines of the pilot log: ***
[2025-05-26 01:25:32]  storage_token=
[2025-05-26 01:25:32]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/log.44871837._032015.job.log.tgz.1
[2025-05-26 01:25:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/49/log.44871837._032015.job.log.tgz.1
[2025-05-26 01:25:32]  workdir=None
[2025-05-26 01:25:32] ]
[2025-05-26 01:25:32] 2025-05-25 23:25:05,572 | INFO     | transferring file log.44871837._032015.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/log.44871837._032015.job.log.tgz.1 to /var/li
[2025-05-26 01:25:32] 2025-05-25 23:25:05,572 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/log.44871837._032015.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-05-26 01:25:32] 2025-05-25 23:25:05,588 | INFO     | adding to output.list: log.44871837._032015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/49/log.44871837._032015.job.log.tg
[2025-05-26 01:25:32] 2025-05-25 23:25:05,589 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-26 01:25:32] 2025-05-25 23:25:05,589 | INFO     | summary of transferred files:
[2025-05-26 01:25:32] 2025-05-25 23:25:05,589 | INFO     |  -- lfn=log.44871837._032015.job.log.tgz.1, status_code=0, status=transferred
[2025-05-26 01:25:32] 2025-05-25 23:25:05,589 | INFO     | stage-out finished correctly
[2025-05-26 01:25:32] 2025-05-25 23:25:08,940 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-26 01:25:32] 2025-05-25 23:25:08,963 | INFO     | job 6665722038 has state=finished
[2025-05-26 01:25:32] 2025-05-25 23:25:08,963 | INFO     | preparing for final server update for job 6665722038 in state='finished'
[2025-05-26 01:25:32] 2025-05-25 23:25:08,963 | INFO     | this job has now completed (state=finished)
[2025-05-26 01:25:32] 2025-05-25 23:25:08,963 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-26 01:25:32] 2025-05-25 23:25:08,963 | INFO     | log transfer has been attempted: DONE
[2025-05-26 01:25:32] 2025-05-25 23:25:08,963 | INFO     | job 6665722038 has finished - writing final server update
[2025-05-26 01:25:32] 2025-05-25 23:25:08,963 | INFO     | total number of processed events: 400 (read)
[2025-05-26 01:25:32] 2025-05-25 23:25:08,964 | INFO     | executing command: lscpu
[2025-05-26 01:25:32] 2025-05-25 23:25:08,982 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 01:25:32] 2025-05-25 23:25:09,303 | INFO     | 4107s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-26 01:25:32] 2025-05-25 23:25:09,775 | WARNING  | process 2178932 can no longer be monitored (due to stat problems) - aborting
[2025-05-26 01:25:32] 2025-05-25 23:25:09,776 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 01:25:32] 2025-05-25 23:25:09,776 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 01:25:32] 2025-05-25 23:25:09,776 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2942425 B
[2025-05-26 01:25:32] 2025-05-25 23:25:09,777 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16054 B
[2025-05-26 01:25:32] 2025-05-25 23:25:09,777 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-05-26 01:25:32] 2025-05-25 23:25:13,344 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-26 01:25:32] 2025-05-25 23:25:13,344 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,344 | INFO     | extracted standard info from prmon json
[2025-05-26 01:25:32] 2025-05-25 23:25:13,345 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 01:25:32] 2025-05-25 23:25:13,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 01:25:32] 2025-05-25 23:25:13,348 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 01:25:32] 2025-05-25 23:25:13,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | fitting pss+swap vs Time
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | sum of square deviations: 66959395.0
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | sum of deviations: -6360754412.500001
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | mean x: 1748213531.5
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | mean y: 2611789.0833333335
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | -- intersect: 166072764222.22336
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | intersect: 166072764222.22336
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | chi2: 0.03384973288537784
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | -- intersect: 166072764222.22336
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | current memory leak: -94.99 B/s (using 60 data points, chi2=0.03)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,350 | INFO     | ..............................
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . Timing measurements:
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . get job = 0 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . initial setup = 1 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . payload setup = 5 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . stage-in = 0 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . payload execution = 4078 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . stage-out = 0 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | . log creation = 0 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,351 | INFO     | ..............................
[2025-05-26 01:25:32] 2025-05-25 23:25:13,366 | INFO     | sufficient remaining disk space (30525095936 B)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,373 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | 
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | job summary report
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | --------------------------------------------------
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | PanDA job id: 6665722038
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | task id: 44871837
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | errors: (none)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | pilot state: finished 
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | transexitcode: 0
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | exeerrorcode: 0
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | exeerrordiag: 
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | exitcode: 0
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | exitmsg: OK
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | cpuconsumptiontime: 15450 s
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | nevents: 400
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | neventsw: 0
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | pid: 2178932
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | pgrp: 2178932
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | corecount: 4
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | event service: False
[2025-05-26 01:25:32] 2025-05-25 23:25:13,378 | INFO     | sizes: {0: 2393755, 3: 2393961, 11: 2393989, 4087: 2419874, 4088: 2428898, 4092: 2428898, 4096: 2429196}
[2025-05-26 01:25:32] 2025-05-25 23:25:13,379 | INFO     | --------------------------------------------------
[2025-05-26 01:25:32] 2025-05-25 23:25:13,379 | INFO     | 
[2025-05-26 01:25:32] 2025-05-25 23:25:13,379 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-05-26 01:25:32] 2025-05-25 23:25:13,381 | INFO     | size of work directory /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038: 3236511 B (within 2537553920 B limit)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,382 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/HITS.44871837._032015.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,382 | INFO     | total size of present files: 0 B (workdir size: 3236511 B)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,382 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6665722038/HITS.44871837._032015.pool.root.1 since it does not exist
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | job 6665722038 has completed (purged errors)
[2025-05-26 01:25:32] 2025-05-25 23:25:13,393 | INFO     | overall cleanup function is called
[2025-05-26 01:25:32] 2025-05-25 23:25:13,441 | INFO     | number of running child processes to parent process 2178932: 1
[2025-05-26 01:25:32] 2025-05-25 23:25:13,441 | INFO     | maximum number of monitored processes: 6
[2025-05-26 01:25:32] 2025-05-25 23:25:13,441 | INFO     | aborting job monitoring since job object (job id=6665722038) has expired
[2025-05-26 01:25:32] 2025-05-25 23:25:14,402 | INFO     | --- collectZombieJob: --- 10, [2178932]
[2025-05-26 01:25:32] 2025-05-25 23:25:14,402 | INFO     | zombie collector waiting for pid 2178932
[2025-05-26 01:25:32] 2025-05-25 23:25:14,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 01:25:32] 2025-05-25 23:25:14,402 | INFO     | collected zombie processes
[2025-05-26 01:25:32] 2025-05-25 23:25:14,402 | INFO     | will attempt to kill all subprocesses of pid=2178932
[2025-05-26 01:25:32] 2025-05-25 23:25:14,454 | INFO     | process IDs to be killed: [2178932] (in reverse order)
[2025-05-26 01:25:32] 2025-05-25 23:25:14,490 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 01:25:32] 2025-05-25 23:25:14,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 01:25:32] 2025-05-25 23:25:14,492 | INFO     | did not find any defunct processes belonging to 2178932
[2025-05-26 01:25:32] 2025-05-25 23:25:14,494 | INFO     | did not find any defunct processes belonging to 2178932
[2025-05-26 01:25:32] 2025-05-25 23:25:14,494 | INFO     | ready for new job
[2025-05-26 01:25:32] 2025-05-25 23:25:14,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 01:25:32] 2025-05-25 23:25:14,494 | INFO     | **************************************
[2025-05-26 01:25:32] 2025-05-25 23:25:14,495 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 01:25:32] 2025-05-25 23:25:14,495 | INFO     | **************************************
[2025-05-26 01:25:32] 2025-05-25 23:25:14,495 | INFO     | 
[2025-05-26 01:25:32] 2025-05-25 23:25:14,495 | INFO     | pilot is running in a VM
[2025-05-26 01:25:32] 2025-05-25 23:25:14,495 | INFO     | architecture information:
[2025-05-26 01:25:32] 2025-05-25 23:25:14,495 | INFO     | executing command: cat /etc/os-release
[2025-05-26 01:25:32] 2025-05-25 23:25:14,507 | INFO     | cat /etc/os-release:
[2025-05-26 01:25:32] NAME="CentOS Linux"
[2025-05-26 01:25:32] VERSION="7 (Core)"
[2025-05-26 01:25:32] ID="centos"
[2025-05-26 01:25:32] ID_LIKE="rhel fedora"
[2025-05-26 01:25:32] VERSION_ID="7"
[2025-05-26 01:25:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 01:25:32] ANSI_COLOR="0;31"
[2025-05-26 01:25:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 01:25:32] HOME_URL="https://www.centos.org/"
[2025-05-26 01:25:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 01:25:32] 
[2025-05-26 01:25:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 01:25:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 01:25:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 01:25:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 01:25:32] 
[2025-05-26 01:25:32] 2025-05-25 23:25:14,507 | INFO     | **************************************
[2025-05-26 01:25:32] 2025-05-25 23:25:15,010 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | INFO     | sufficient remaining disk space (30528241664 B)
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | INFO     | update_server=False
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 01:25:32] 2025-05-25 23:25:15,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 01:25:32] 2025-05-25 23:25:15,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 01:25:32] 2025-05-25 23:25:15,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 01:25:32] 2025-05-25 23:25:15,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 01:25:32] 2025-05-25 23:25:15,021 | INFO     | aborting loop
[2025-05-26 01:25:32] 2025-05-25 23:25:15,055 | INFO     | all payload control threads have been joined
[2025-05-26 01:25:32] 2025-05-25 23:25:15,638 | INFO     | all job control threads have been joined
[2025-05-26 01:25:32] 2025-05-25 23:25:15,787 | INFO     | all data control threads have been joined
[2025-05-26 01:25:32] 2025-05-25 23:25:16,026 | INFO     | [job] retrieve thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:16,026 | INFO     | [job] queue monitor thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:16,027 | INFO     | [job] job monitor thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:16,061 | INFO     | [payload] control thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:16,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 01:25:32] 2025-05-25 23:25:16,554 | INFO     | [payload] failed_post thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:16,644 | INFO     | [job] control thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:16,792 | INFO     | [data] control thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:17,084 | INFO     | [payload] validate_post thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:17,194 | INFO     | [job] validate thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:17,195 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:17,386 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:17,390 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:17,504 | INFO     | [data] copytool_in thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:18,133 | INFO     | [data] copytool_out thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:19,028 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:25,802 | INFO     | job.realtimelogging is not enabled
[2025-05-26 01:25:32] 2025-05-25 23:25:26,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 01:25:32] 2025-05-25 23:25:27,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130249699809088)>', '<ExcThread(monitor, started 130248658097920)>']
[2025-05-26 01:25:32] 2025-05-25 23:25:28,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 01:25:32] 2025-05-25 23:25:28,091 | INFO     | [monitor] control thread has ended
[2025-05-26 01:25:32] 2025-05-25 23:25:32,437 | INFO     | all workflow threads have been joined
[2025-05-26 01:25:32] 2025-05-25 23:25:32,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 01:25:32] 2025-05-25 23:25:32,437 | INFO     | traces error code: 0
[2025-05-26 01:25:32] 2025-05-25 23:25:32,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 01:25:32] 2025-05-25 23:25:32,488 [wrapper] ==== pilot stdout END ====
[2025-05-26 01:25:32] 2025-05-25 23:25:32,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 01:25:32] 2025-05-25 23:25:32,493 [wrapper] pilotpid: 2172304
[2025-05-26 01:25:32] 2025-05-25 23:25:32,496 [wrapper] Pilot exit status: 0
[2025-05-26 01:25:32] 2025-05-25 23:25:32,507 [wrapper] pandaids: 6665722038
[2025-05-26 01:25:32] 2025-05-25 23:25:32,533 [wrapper] cleanup supervisor_pilot 2213999 2172305
[2025-05-26 01:25:32] 2025-05-25 23:25:32,536 [wrapper] Test setup, not cleaning
[2025-05-26 01:25:32] 2025-05-25 23:25:32,539 [wrapper] apfmon messages muted
[2025-05-26 01:25:32] 2025-05-25 23:25:32,541 [wrapper] ==== wrapper stdout END ====
[2025-05-26 01:25:32] 2025-05-25 23:25:32,544 [wrapper] ==== wrapper stderr END ====
[2025-05-26 01:25:32]  *** Error codes and diagnostics ***
[2025-05-26 01:25:32]     "exeErrorCode": 0,
[2025-05-26 01:25:32]     "exeErrorDiag": "",
[2025-05-26 01:25:32]     "pilotErrorCode": 0,
[2025-05-26 01:25:32]     "pilotErrorDiag": "",
[2025-05-26 01:25:32]  *** Listing of results directory ***
[2025-05-26 01:25:32] insgesamt 414640
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc    495897 Mai 25 10:37 pilot3.tar.gz
[2025-05-26 01:25:32] -rwx------ 1 yeti boinc     37140 Mai 25 10:48 runpilot2-wrapper.sh
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc      5111 Mai 25 10:48 queuedata.json
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc       100 Mai 26 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 01:25:32] -rwxr-xr-x 1 yeti boinc      7986 Mai 26 00:16 run_atlas
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc       105 Mai 26 00:16 job.xml
[2025-05-26 01:25:32] -rw-r--r-- 2 yeti boinc     15093 Mai 26 00:16 start_atlas.sh
[2025-05-26 01:25:32] drwxrwx--x 2 yeti boinc      4096 Mai 26 00:16 shared
[2025-05-26 01:25:32] -rw-r--r-- 2 yeti boinc    508880 Mai 26 00:16 input.tar.gz
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc      6734 Mai 26 00:16 init_data.xml
[2025-05-26 01:25:32] -rw-r--r-- 2 yeti boinc 222174276 Mai 26 00:16 EVNT.44871834._001276.pool.root.1
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc         0 Mai 26 00:16 boinc_lockfile
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc      2559 Mai 26 00:16 pandaJob.out
[2025-05-26 01:25:32] -rw------- 1 yeti boinc    990803 Mai 26 00:16 agis_schedconf.cvmfs.json
[2025-05-26 01:25:32] -rw------- 1 yeti boinc   1596740 Mai 26 00:16 agis_ddmendpoints.agis.ALL.json
[2025-05-26 01:25:32] drwx------ 4 yeti boinc      4096 Mai 26 00:16 pilot3
[2025-05-26 01:25:32] -rw------- 1 yeti boinc 197209651 Mai 26 01:24 HITS.44871837._032015.pool.root.1
[2025-05-26 01:25:32] -rw------- 1 yeti boinc      1034 Mai 26 01:25 memory_monitor_summary.json
[2025-05-26 01:25:32] -rw------- 1 yeti boinc    261247 Mai 26 01:25 log.44871837._032015.job.log.tgz.1
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc      8192 Mai 26 01:25 boinc_mmap_file
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc        27 Mai 26 01:25 wrapper_checkpoint.txt
[2025-05-26 01:25:32] -rw------- 1 yeti boinc        95 Mai 26 01:25 pilot_heartbeat.json
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc       529 Mai 26 01:25 boinc_task_state.xml
[2025-05-26 01:25:32] -rw------- 1 yeti boinc      7654 Mai 26 01:25 heartbeat.json
[2025-05-26 01:25:32] -rw------- 1 yeti boinc      4624 Mai 26 01:25 pilotlog.txt
[2025-05-26 01:25:32] -rw------- 1 yeti boinc    428359 Mai 26 01:25 log.44871837._032015.job.log.1
[2025-05-26 01:25:32] -rw------- 1 yeti boinc       357 Mai 26 01:25 output.list
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc       620 Mai 26 01:25 runtime_log
[2025-05-26 01:25:32] -rw------- 1 yeti boinc    706560 Mai 26 01:25 result.tar.gz
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc      8838 Mai 26 01:25 runtime_log.err
[2025-05-26 01:25:32] -rw------- 1 yeti boinc       639 Mai 26 01:25 NIYMDm3CMd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdCOKDmoY3Kcn.diag
[2025-05-26 01:25:32] -rw-r--r-- 1 yeti boinc     22200 Mai 26 01:25 stderr.txt
[2025-05-26 01:25:32] HITS file was successfully produced:
[2025-05-26 01:25:32] -rw------- 1 yeti boinc 197209651 Mai 26 01:24 shared/HITS.pool.root.1
[2025-05-26 01:25:32]  *** Contents of shared directory: ***
[2025-05-26 01:25:32] insgesamt 410772
[2025-05-26 01:25:32] -rw-r--r-- 2 yeti boinc     15093 Mai 26 00:16 start_atlas.sh
[2025-05-26 01:25:32] -rw-r--r-- 2 yeti boinc    508880 Mai 26 00:16 input.tar.gz
[2025-05-26 01:25:32] -rw-r--r-- 2 yeti boinc 222174276 Mai 26 00:16 ATLAS.root_0
[2025-05-26 01:25:32] -rw------- 1 yeti boinc 197209651 Mai 26 01:24 HITS.pool.root.1
[2025-05-26 01:25:32] -rw------- 1 yeti boinc    706560 Mai 26 01:25 result.tar.gz
01:25:34 (2168592): run_atlas exited; CPU time 15464.914989
01:25:34 (2168592): called boinc_finish(0)

</stderr_txt>
]]>

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