Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:08:46 (506886): wrapper (7.7.26015): starting
16:08:46 (506886): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 16:08:46] Arguments: --nthreads 8
[2025-05-25 16:08:46] Threads: 8
[2025-05-25 16:08:46] Checking for CVMFS
[2025-05-25 16:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 16:08:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 16:08:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 16:08:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 16:08:48] 2.12.6.0 1062744 9307 282404 146412 1 668 32623968 32935936 20050 16776704 0 39194258 99.587 44638944 35049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 16:08:48] CVMFS is ok
[2025-05-25 16:08:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 16:08:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 16:08:48] Further information can be found at the LHC@home message board.
[2025-05-25 16:08:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 16:08:48] Checking for apptainer binary...
[2025-05-25 16:08:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 16:08:48] Running /usr/bin/apptainer --version
[2025-05-25 16:08:48] apptainer version 1.4.1-1.el9
[2025-05-25 16:08:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 16:08:48] c6-4-5-2.aglt2.org
[2025-05-25 16:08:48] apptainer works
[2025-05-25 16:08:48] Set ATHENA_PROC_NUMBER=8
[2025-05-25 16:08:48] Set ATHENA_CORE_NUMBER=8
[2025-05-25 16:08:49] Starting ATLAS job with PandaID=6665720659
[2025-05-25 16:08:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 21:48:39]  *** The last 200 lines of the pilot log: ***
[2025-05-25 21:48:39] 2025-05-26 01:48:21,664 | INFO     | extracted standard info from prmon json
[2025-05-25 21:48:39] 2025-05-26 01:48:21,664 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 21:48:39] 2025-05-26 01:48:21,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 21:48:39] 2025-05-26 01:48:21,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 21:48:39] 2025-05-26 01:48:21,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 21:48:39] 2025-05-26 01:48:21,671 | INFO     | fitting pss+swap vs Time
[2025-05-25 21:48:39] 2025-05-26 01:48:21,671 | INFO     | sum of square deviations: 11143041953.806065
[2025-05-25 21:48:39] 2025-05-26 01:48:21,673 | INFO     | sum of deviations: 19209830532.98789
[2025-05-25 21:48:39] 2025-05-26 01:48:21,674 | INFO     | mean x: 1748213979.8424242
[2025-05-25 21:48:39] 2025-05-26 01:48:21,674 | INFO     | mean y: 2091807.6151515152
[2025-05-25 21:48:39] 2025-05-26 01:48:21,674 | INFO     | -- intersect: -3011707694.1180854
[2025-05-25 21:48:39] 2025-05-26 01:48:21,674 | INFO     | intersect: -3011707694.1180854
[2025-05-25 21:48:39] 2025-05-26 01:48:21,674 | INFO     | chi2: 4.795641976862333
[2025-05-25 21:48:39] 2025-05-26 01:48:21,675 | INFO     | sum of square deviations: 10644192645.710758
[2025-05-25 21:48:39] 2025-05-26 01:48:21,677 | INFO     | sum of deviations: 44153092461.4092
[2025-05-25 21:48:39] 2025-05-26 01:48:21,677 | INFO     | mean x: 1748213827.3476923
[2025-05-25 21:48:39] 2025-05-26 01:48:21,677 | INFO     | mean y: 2099360.412307692
[2025-05-25 21:48:39] 2025-05-26 01:48:21,677 | INFO     | -- intersect: -7249652776.214159
[2025-05-25 21:48:39] 2025-05-26 01:48:21,677 | INFO     | intersect: -7249652776.214159
[2025-05-25 21:48:39] 2025-05-26 01:48:21,678 | INFO     | chi2: 4.085132442377075
[2025-05-25 21:48:39] 2025-05-26 01:48:21,678 | INFO     | current chi2=4.085132442377075 (change=14.815733491225428 %)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,678 | INFO     | right removable region: 324
[2025-05-25 21:48:39] 2025-05-26 01:48:21,678 | INFO     | sum of square deviations: 10644123715.710781
[2025-05-25 21:48:39] 2025-05-26 01:48:21,680 | INFO     | sum of deviations: -58013591511.96617
[2025-05-25 21:48:39] 2025-05-26 01:48:21,680 | INFO     | mean x: 1748214132.3476923
[2025-05-25 21:48:39] 2025-05-26 01:48:21,681 | INFO     | mean y: 2115369.7784615383
[2025-05-25 21:48:39] 2025-05-26 01:48:21,681 | INFO     | -- intersect: 9530394376.886269
[2025-05-25 21:48:39] 2025-05-26 01:48:21,681 | INFO     | intersect: 9530394376.886269
[2025-05-25 21:48:39] 2025-05-26 01:48:21,681 | INFO     | chi2: 1.7784860460119303
[2025-05-25 21:48:39] 2025-05-26 01:48:21,681 | INFO     | current chi2=1.7784860460119303 (change=62.91453668575257 %)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,682 | INFO     | sum of square deviations: 10160341986.799994
[2025-05-25 21:48:39] 2025-05-26 01:48:21,684 | INFO     | sum of deviations: -93704285862.34996
[2025-05-25 21:48:39] 2025-05-26 01:48:21,684 | INFO     | mean x: 1748214284.85
[2025-05-25 21:48:39] 2025-05-26 01:48:21,684 | INFO     | mean y: 2126595.346875
[2025-05-25 21:48:39] 2025-05-26 01:48:21,684 | INFO     | -- intersect: 16125124355.565159
[2025-05-25 21:48:39] 2025-05-26 01:48:21,684 | INFO     | intersect: 16125124355.565159
[2025-05-25 21:48:39] 2025-05-26 01:48:21,684 | INFO     | chi2: 1.0658288989273723
[2025-05-25 21:48:39] 2025-05-26 01:48:21,685 | INFO     | current chi2=1.0658288989273723 (change=40.07100020169499 %)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,685 | INFO     | sum of square deviations: 9691444135.885721
[2025-05-25 21:48:39] 2025-05-26 01:48:21,687 | INFO     | sum of deviations: -94487830429.12383
[2025-05-25 21:48:39] 2025-05-26 01:48:21,687 | INFO     | mean x: 1748214437.352381
[2025-05-25 21:48:39] 2025-05-26 01:48:21,687 | INFO     | mean y: 2126833.9650793653
[2025-05-25 21:48:39] 2025-05-26 01:48:21,687 | INFO     | -- intersect: 17046541164.193409
[2025-05-25 21:48:39] 2025-05-26 01:48:21,687 | INFO     | intersect: 17046541164.193409
[2025-05-25 21:48:39] 2025-05-26 01:48:21,688 | INFO     | chi2: 1.0399601199360207
[2025-05-25 21:48:39] 2025-05-26 01:48:21,688 | INFO     | current chi2=1.0399601199360207 (change=2.427104295763179 %)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,688 | INFO     | left removable region: 30
[2025-05-25 21:48:39] 2025-05-26 01:48:21,688 | INFO     | sum of square deviations: 7879508821.414964
[2025-05-25 21:48:39] 2025-05-26 01:48:21,690 | INFO     | sum of deviations: -36866547448.84356
[2025-05-25 21:48:39] 2025-05-26 01:48:21,691 | INFO     | mean x: 1748214711.8503401
[2025-05-25 21:48:39] 2025-05-26 01:48:21,691 | INFO     | mean y: 2124733.4353741496
[2025-05-25 21:48:39] 2025-05-26 01:48:21,691 | INFO     | -- intersect: 8181649889.880749
[2025-05-25 21:48:39] 2025-05-26 01:48:21,691 | INFO     | intersect: 8181649889.880749
[2025-05-25 21:48:39] 2025-05-26 01:48:21,691 | INFO     | chi2: 0.20984811364682274
[2025-05-25 21:48:39] 2025-05-26 01:48:21,691 | INFO     | -- intersect: 8181649889.880749
[2025-05-25 21:48:39] 2025-05-26 01:48:21,691 | INFO     | current memory leak: -4.68 B/s (using 294 data points, chi2=0.21)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,692 | INFO     | ..............................
[2025-05-25 21:48:39] 2025-05-26 01:48:21,692 | INFO     | . Timing measurements:
[2025-05-25 21:48:39] 2025-05-26 01:48:21,692 | INFO     | . get job = 0 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,692 | INFO     | . initial setup = 7 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,692 | INFO     | . payload setup = 52 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,692 | INFO     | . stage-in = 0 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,692 | INFO     | . payload execution = 20156 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,693 | INFO     | . stage-out = 5 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,693 | INFO     | . log creation = 0 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,693 | INFO     | ..............................
[2025-05-25 21:48:39] 2025-05-26 01:48:21,797 | INFO     | 
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | job summary report
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | --------------------------------------------------
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | PanDA job id: 6665720659
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | task id: 44871837
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | errors: (none)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | pilot state: finished 
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | transexitcode: 0
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | exeerrorcode: 0
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | exeerrordiag: 
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | exitcode: 0
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | exitmsg: OK
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | cpuconsumptiontime: 44515 s
[2025-05-25 21:48:39] 2025-05-26 01:48:21,798 | INFO     | nevents: 400
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | neventsw: 0
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | pid: 538194
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | pgrp: 538194
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | corecount: 8
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | event service: False
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | sizes: {0: 2393514, 1: 2393570, 2: 2393797, 3: 2393797, 14: 2393825, 26: 2393853, 34: 2394215, 36: 2394243, 20213: 2427088, 20214: 2427087, 20219: 2436084, 20221: 
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | --------------------------------------------------
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | 
[2025-05-25 21:48:39] 2025-05-26 01:48:21,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 21:48:39] 2025-05-26 01:48:21,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,890 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 21:48:39] 2025-05-26 01:48:21,912 | INFO     | job 6665720659 has completed (purged errors)
[2025-05-25 21:48:39] 2025-05-26 01:48:21,912 | INFO     | overall cleanup function is called
[2025-05-25 21:48:39] 2025-05-26 01:48:22,920 | INFO     | --- collectZombieJob: --- 10, [538194]
[2025-05-25 21:48:39] 2025-05-26 01:48:22,921 | INFO     | zombie collector waiting for pid 538194
[2025-05-25 21:48:39] 2025-05-26 01:48:22,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 21:48:39] 2025-05-26 01:48:22,921 | INFO     | collected zombie processes
[2025-05-25 21:48:39] 2025-05-26 01:48:22,921 | INFO     | will attempt to kill all subprocesses of pid=538194
[2025-05-25 21:48:39] 2025-05-26 01:48:23,823 | INFO     | process IDs to be killed: [538194] (in reverse order)
[2025-05-25 21:48:39] 2025-05-26 01:48:23,966 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 21:48:39] 2025-05-26 01:48:23,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 21:48:39] 2025-05-26 01:48:23,978 | INFO     | did not find any defunct processes belonging to 538194
[2025-05-25 21:48:39] 2025-05-26 01:48:23,990 | INFO     | did not find any defunct processes belonging to 538194
[2025-05-25 21:48:39] 2025-05-26 01:48:23,990 | INFO     | ready for new job
[2025-05-25 21:48:39] 2025-05-26 01:48:23,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 21:48:39] 2025-05-26 01:48:23,992 | INFO     | **************************************
[2025-05-25 21:48:39] 2025-05-26 01:48:23,992 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 21:48:39] 2025-05-26 01:48:23,992 | INFO     | **************************************
[2025-05-25 21:48:39] 2025-05-26 01:48:23,992 | INFO     | 
[2025-05-25 21:48:39] 2025-05-26 01:48:24,007 | INFO     | architecture information:
[2025-05-25 21:48:39] 2025-05-26 01:48:24,009 | INFO     | executing command: cat /etc/os-release
[2025-05-25 21:48:39] 2025-05-26 01:48:24,133 | INFO     | cat /etc/os-release:
[2025-05-25 21:48:39] NAME="CentOS Linux"
[2025-05-25 21:48:39] VERSION="7 (Core)"
[2025-05-25 21:48:39] ID="centos"
[2025-05-25 21:48:39] ID_LIKE="rhel fedora"
[2025-05-25 21:48:39] VERSION_ID="7"
[2025-05-25 21:48:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 21:48:39] ANSI_COLOR="0;31"
[2025-05-25 21:48:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 21:48:39] HOME_URL="https://www.centos.org/"
[2025-05-25 21:48:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 21:48:39] 
[2025-05-25 21:48:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 21:48:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 21:48:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 21:48:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 21:48:39] 
[2025-05-25 21:48:39] 2025-05-26 01:48:24,133 | INFO     | **************************************
[2025-05-25 21:48:39] 2025-05-26 01:48:24,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 21:48:39] 2025-05-26 01:48:24,715 | INFO     | sufficient remaining disk space (74793877504 B)
[2025-05-25 21:48:39] 2025-05-26 01:48:24,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 21:48:39] 2025-05-26 01:48:24,715 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 21:48:39] 2025-05-26 01:48:24,715 | INFO     | update_server=False
[2025-05-25 21:48:39] 2025-05-26 01:48:24,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 21:48:39] 2025-05-26 01:48:24,729 | INFO     | all payload control threads have been joined
[2025-05-25 21:48:39] 2025-05-26 01:48:24,811 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 21:48:39] 2025-05-26 01:48:24,812 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 21:48:39] 2025-05-26 01:48:24,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:48:39] 2025-05-26 01:48:24,812 | INFO     | will abort loop
[2025-05-25 21:48:39] 2025-05-26 01:48:24,990 | INFO     | all data control threads have been joined
[2025-05-25 21:48:39] 2025-05-26 01:48:25,490 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 21:48:39] 2025-05-26 01:48:25,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 21:48:39] 2025-05-26 01:48:25,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 21:48:39] 2025-05-26 01:48:25,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 21:48:39] 2025-05-26 01:48:25,722 | INFO     | [job] retrieve thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:25,735 | INFO     | [payload] control thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:25,817 | INFO     | [job] job monitor thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:25,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:25,970 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:25,996 | INFO     | [data] control thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:26,079 | INFO     | [payload] failed_post thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:26,080 | INFO     | [payload] validate_post thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:26,132 | INFO     | [data] copytool_in thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:26,345 | INFO     | all job control threads have been joined
[2025-05-25 21:48:39] 2025-05-26 01:48:26,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:48:39] 2025-05-26 01:48:26,923 | INFO     | [job] validate thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:27,076 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:27,115 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:27,351 | INFO     | [job] control thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:27,506 | INFO     | [data] copytool_out thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:27,860 | INFO     | [job] queue monitor thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:27,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 21:48:39] 2025-05-26 01:48:31,898 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 21:48:39] 2025-05-26 01:48:33,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398756079424)>', '<ExcThread(monitor, started 140398018148096)>']
[2025-05-25 21:48:39] 2025-05-26 01:48:33,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 21:48:39] 2025-05-26 01:48:33,539 | INFO     | [monitor] control thread has ended
[2025-05-25 21:48:39] 2025-05-26 01:48:38,237 | INFO     | all workflow threads have been joined
[2025-05-25 21:48:39] 2025-05-26 01:48:38,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 21:48:39] 2025-05-26 01:48:38,238 | INFO     | traces error code: 0
[2025-05-25 21:48:39] 2025-05-26 01:48:38,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 21:48:39] 2025-05-26 01:48:38,480 [wrapper] ==== pilot stdout END ====
[2025-05-25 21:48:39] 2025-05-26 01:48:38,511 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 21:48:39] 2025-05-26 01:48:38,522 [wrapper] pilotpid: 515041
[2025-05-25 21:48:39] 2025-05-26 01:48:38,539 [wrapper] Pilot exit status: 0
[2025-05-25 21:48:39] 2025-05-26 01:48:38,642 [wrapper] pandaids: 6665720659
[2025-05-25 21:48:39] 2025-05-26 01:48:38,817 [wrapper] cleanup supervisor_pilot 2569961 515042
[2025-05-25 21:48:39] 2025-05-26 01:48:38,837 [wrapper] Test setup, not cleaning
[2025-05-25 21:48:39] 2025-05-26 01:48:38,853 [wrapper] apfmon messages muted
[2025-05-25 21:48:39] 2025-05-26 01:48:38,889 [wrapper] ==== wrapper stdout END ====
[2025-05-25 21:48:39] 2025-05-26 01:48:38,932 [wrapper] ==== wrapper stderr END ====
[2025-05-25 21:48:39]  *** Error codes and diagnostics ***
[2025-05-25 21:48:39]     "exeErrorCode": 0,
[2025-05-25 21:48:39]     "exeErrorDiag": "",
[2025-05-25 21:48:39]     "pilotErrorCode": 0,
[2025-05-25 21:48:39]     "pilotErrorDiag": "",
[2025-05-25 21:48:39]  *** Listing of results directory ***
[2025-05-25 21:48:39] total 416940
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas    495897 May 25 03:27 pilot3.tar.gz
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas      5111 May 25 03:34 queuedata.json
[2025-05-25 21:48:39] -rwx------. 1 boincer umatlas     37140 May 25 03:35 runpilot2-wrapper.sh
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas       100 May 25 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 21:48:39] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 16:08 run_atlas
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas       105 May 25 16:08 job.xml
[2025-05-25 21:48:39] -rw-r--r--. 2 boincer umatlas 225548010 May 25 16:08 EVNT.44871834._001241.pool.root.1
[2025-05-25 21:48:39] -rw-r--r--. 2 boincer umatlas     15093 May 25 16:08 start_atlas.sh
[2025-05-25 21:48:39] drwxrwx--x. 2 boincer umatlas      4096 May 25 16:08 shared
[2025-05-25 21:48:39] -rw-r--r--. 2 boincer umatlas    508880 May 25 16:08 input.tar.gz
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas         0 May 25 16:08 boinc_lockfile
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas      2559 May 25 16:08 pandaJob.out
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas    990803 May 25 16:09 agis_schedconf.cvmfs.json
[2025-05-25 21:48:39] drwx------. 4 boincer umatlas      4096 May 25 16:09 pilot3
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas      6856 May 25 21:46 init_data.xml
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas 193366220 May 25 21:46 HITS.44871837._031135.pool.root.1
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas       531 May 25 21:46 boinc_task_state.xml
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas        95 May 25 21:47 pilot_heartbeat.json
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas      1044 May 25 21:47 memory_monitor_summary.json
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas   1596740 May 25 21:47 agis_ddmendpoints.agis.ALL.json
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas    449707 May 25 21:48 log.44871837._031135.job.log.tgz.1
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas      7723 May 25 21:48 heartbeat.json
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas        28 May 25 21:48 wrapper_checkpoint.txt
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas      8192 May 25 21:48 boinc_mmap_file
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas      4539 May 25 21:48 pilotlog.txt
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas   1650799 May 25 21:48 log.44871837._031135.job.log.1
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas       357 May 25 21:48 output.list
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas       620 May 25 21:48 runtime_log
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas   2119680 May 25 21:48 result.tar.gz
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas       656 May 25 21:48 wgvLDmp4Kd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg6NKDmWYkCHm.diag
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas      8660 May 25 21:48 runtime_log.err
[2025-05-25 21:48:39] -rw-r--r--. 1 boincer umatlas     20895 May 25 21:48 stderr.txt
[2025-05-25 21:48:39] HITS file was successfully produced:
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas 193366220 May 25 21:46 shared/HITS.pool.root.1
[2025-05-25 21:48:39]  *** Contents of shared directory: ***
[2025-05-25 21:48:39] total 411692
[2025-05-25 21:48:39] -rw-r--r--. 2 boincer umatlas 225548010 May 25 16:08 ATLAS.root_0
[2025-05-25 21:48:39] -rw-r--r--. 2 boincer umatlas     15093 May 25 16:08 start_atlas.sh
[2025-05-25 21:48:39] -rw-r--r--. 2 boincer umatlas    508880 May 25 16:08 input.tar.gz
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas 193366220 May 25 21:46 HITS.pool.root.1
[2025-05-25 21:48:39] -rw-------. 1 boincer umatlas   2119680 May 25 21:48 result.tar.gz
21:48:40 (506886): run_atlas exited; CPU time 45081.583039
21:48:40 (506886): called boinc_finish(0)

</stderr_txt>
]]>

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