Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:14:33 (225242): wrapper (7.7.26015): starting
10:14:33 (225242): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 10:14:33] Arguments: --nthreads 4
[2025-05-28 10:14:33] Threads: 4
[2025-05-28 10:14:33] Checking for CVMFS
[2025-05-28 10:14:33] No cvmfs_config command found, will try listing directly
[2025-05-28 10:14:33] CVMFS is ok
[2025-05-28 10:14:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 10:14:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 10:14:33] Further information can be found at the LHC@home message board.
[2025-05-28 10:14:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 10:14:33] Checking for apptainer binary...
[2025-05-28 10:14:33] which: no apptainer in ((null))
[2025-05-28 10:14:33] apptainer is not installed, using version from CVMFS
[2025-05-28 10:14:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 10:14:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-05-28 10:14:33] apptainer works
[2025-05-28 10:14:33] Set ATHENA_PROC_NUMBER=4
[2025-05-28 10:14:33] Set ATHENA_CORE_NUMBER=4
[2025-05-28 10:14:33] Starting ATLAS job with PandaID=6665720984
[2025-05-28 10:14:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 14:17:12]  *** The last 200 lines of the pilot log: ***
[2025-05-28 14:17:12] 2025-05-28 12:16:54,048 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-28 14:17:12] 2025-05-28 12:16:55,158 | INFO     | monitor loop #1041: job 0:6665720984 is in state 'finished'
[2025-05-28 14:17:12] 2025-05-28 12:16:55,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 14:17:12] 2025-05-28 12:16:57,661 | INFO     | monitor loop #1042: job 0:6665720984 is in state 'finished'
[2025-05-28 14:17:12] 2025-05-28 12:16:57,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 14:17:12] 2025-05-28 12:16:57,754 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 14:17:12] 2025-05-28 12:16:57,755 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6665720984/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 14:17:12] 2025-05-28 12:16:57,755 | INFO     | extracted standard info from prmon json
[2025-05-28 14:17:12] 2025-05-28 12:16:57,756 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 14:17:12] 2025-05-28 12:16:57,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 14:17:12] 2025-05-28 12:16:57,756 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 14:17:12] 2025-05-28 12:16:57,756 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 14:17:12] 2025-05-28 12:16:57,761 | INFO     | fitting pss+swap vs Time
[2025-05-28 14:17:12] 2025-05-28 12:16:57,761 | INFO     | sum of square deviations: 4180243959.5
[2025-05-28 14:17:12] 2025-05-28 12:16:57,763 | INFO     | sum of deviations: 2111781295.500006
[2025-05-28 14:17:12] 2025-05-28 12:16:57,763 | INFO     | mean x: 1748427340.5
[2025-05-28 14:17:12] 2025-05-28 12:16:57,763 | INFO     | mean y: 2328575.844537815
[2025-05-28 14:17:12] 2025-05-28 12:16:57,763 | INFO     | -- intersect: -880944312.0493919
[2025-05-28 14:17:12] 2025-05-28 12:16:57,763 | INFO     | intersect: -880944312.0493919
[2025-05-28 14:17:12] 2025-05-28 12:16:57,763 | INFO     | chi2: 1.742126214216284
[2025-05-28 14:17:12] 2025-05-28 12:16:57,764 | INFO     | sum of square deviations: 3922276332.0
[2025-05-28 14:17:12] 2025-05-28 12:16:57,765 | INFO     | sum of deviations: 2026110181.0000062
[2025-05-28 14:17:12] 2025-05-28 12:16:57,765 | INFO     | mean x: 1748427188.0
[2025-05-28 14:17:12] 2025-05-28 12:16:57,766 | INFO     | mean y: 2328525.3948497856
[2025-05-28 14:17:12] 2025-05-28 12:16:57,766 | INFO     | -- intersect: -900847545.4603262
[2025-05-28 14:17:12] 2025-05-28 12:16:57,766 | INFO     | intersect: -900847545.4603262
[2025-05-28 14:17:12] 2025-05-28 12:16:57,766 | INFO     | chi2: 1.7422014924640037
[2025-05-28 14:17:12] 2025-05-28 12:16:57,766 | INFO     | current chi2=1.7422014924640037 (change=-0.004321055908882229 %)
[2025-05-28 14:17:12] 2025-05-28 12:16:57,766 | INFO     | right removable region: 232
[2025-05-28 14:17:12] 2025-05-28 12:16:57,767 | INFO     | sum of square deviations: 3922276332.0
[2025-05-28 14:17:12] 2025-05-28 12:16:57,768 | INFO     | sum of deviations: -35405719064.00001
[2025-05-28 14:17:12] 2025-05-28 12:16:57,768 | INFO     | mean x: 1748427493.0
[2025-05-28 14:17:12] 2025-05-28 12:16:57,768 | INFO     | mean y: 2350565.9356223177
[2025-05-28 14:17:12] 2025-05-28 12:16:57,769 | INFO     | -- intersect: 15785107154.47163
[2025-05-28 14:17:12] 2025-05-28 12:16:57,769 | INFO     | intersect: 15785107154.47163
[2025-05-28 14:17:12] 2025-05-28 12:16:57,769 | INFO     | chi2: 0.12678667750911313
[2025-05-28 14:17:12] 2025-05-28 12:16:57,769 | INFO     | current chi2=0.12678667750911313 (change=92.72230240986589 %)
[2025-05-28 14:17:12] 2025-05-28 12:16:57,769 | INFO     | sum of square deviations: 3675146117.0
[2025-05-28 14:17:12] 2025-05-28 12:16:57,771 | INFO     | sum of deviations: -30648436241.0
[2025-05-28 14:17:12] 2025-05-28 12:16:57,771 | INFO     | mean x: 1748427645.5
[2025-05-28 14:17:12] 2025-05-28 12:16:57,771 | INFO     | mean y: 2347613.710526316
[2025-05-28 14:17:12] 2025-05-28 12:16:57,771 | INFO     | -- intersect: 14583148351.736937
[2025-05-28 14:17:12] 2025-05-28 12:16:57,771 | INFO     | intersect: 14583148351.736937
[2025-05-28 14:17:12] 2025-05-28 12:16:57,772 | INFO     | chi2: 0.11829815690176461
[2025-05-28 14:17:12] 2025-05-28 12:16:57,772 | INFO     | current chi2=0.11829815690176461 (change=6.6951203187246415 %)
[2025-05-28 14:17:12] 2025-05-28 12:16:57,772 | INFO     | left removable region: 20
[2025-05-28 14:17:12] 2025-05-28 12:16:57,772 | INFO     | sum of square deviations: 2954447953.0
[2025-05-28 14:17:12] 2025-05-28 12:16:57,774 | INFO     | sum of deviations: -15121812830.999998
[2025-05-28 14:17:12] 2025-05-28 12:16:57,774 | INFO     | mean x: 1748427767.5
[2025-05-28 14:17:12] 2025-05-28 12:16:57,774 | INFO     | mean y: 2337734.9245283017
[2025-05-28 14:17:12] 2025-05-28 12:16:57,774 | INFO     | -- intersect: 8951352193.551609
[2025-05-28 14:17:12] 2025-05-28 12:16:57,775 | INFO     | intersect: 8951352193.551609
[2025-05-28 14:17:12] 2025-05-28 12:16:57,775 | INFO     | chi2: 0.06220147552960997
[2025-05-28 14:17:12] 2025-05-28 12:16:57,775 | INFO     | -- intersect: 8951352193.551609
[2025-05-28 14:17:12] 2025-05-28 12:16:57,775 | INFO     | current memory leak: -5.12 B/s (using 212 data points, chi2=0.06)
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | ..............................
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . Timing measurements:
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . get job = 0 s
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . initial setup = 1 s
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . payload setup = 7 s
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . stage-in = 0 s
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . payload execution = 14499 s
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . stage-out = 1 s
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | . log creation = 0 s
[2025-05-28 14:17:12] 2025-05-28 12:16:57,776 | INFO     | ..............................
[2025-05-28 14:17:12] 2025-05-28 12:16:58,151 | INFO     | 
[2025-05-28 14:17:12] 2025-05-28 12:16:58,151 | INFO     | job summary report
[2025-05-28 14:17:12] 2025-05-28 12:16:58,151 | INFO     | --------------------------------------------------
[2025-05-28 14:17:12] 2025-05-28 12:16:58,151 | INFO     | PanDA job id: 6665720984
[2025-05-28 14:17:12] 2025-05-28 12:16:58,151 | INFO     | task id: 44871837
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | errors: (none)
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | pilot state: finished 
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | transexitcode: 0
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | exeerrorcode: 0
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | exeerrordiag: 
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | exitcode: 0
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | exitmsg: OK
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | cpuconsumptiontime: 55586 s
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | nevents: 400
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | neventsw: 0
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | pid: 236146
[2025-05-28 14:17:12] 2025-05-28 12:16:58,152 | INFO     | pgrp: 236146
[2025-05-28 14:17:12] 2025-05-28 12:16:58,153 | INFO     | corecount: 4
[2025-05-28 14:17:12] 2025-05-28 12:16:58,153 | INFO     | event service: False
[2025-05-28 14:17:12] 2025-05-28 12:16:58,153 | INFO     | sizes: {0: 2405245, 5: 2405451, 11: 2405507, 14510: 2435891, 14512: 2444854, 14513: 2444910, 14519: 2445208}
[2025-05-28 14:17:12] 2025-05-28 12:16:58,153 | INFO     | --------------------------------------------------
[2025-05-28 14:17:12] 2025-05-28 12:16:58,153 | INFO     | 
[2025-05-28 14:17:12] 2025-05-28 12:16:58,153 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-05-28 14:17:12] 2025-05-28 12:16:58,172 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,172 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,172 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,172 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 14:17:12] 2025-05-28 12:16:58,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,174 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 14:17:12] 2025-05-28 12:16:58,174 | INFO     | job 6665720984 has completed (purged errors)
[2025-05-28 14:17:12] 2025-05-28 12:16:58,174 | INFO     | overall cleanup function is called
[2025-05-28 14:17:12] 2025-05-28 12:16:59,181 | INFO     | --- collectZombieJob: --- 10, [236146]
[2025-05-28 14:17:12] 2025-05-28 12:16:59,182 | INFO     | zombie collector waiting for pid 236146
[2025-05-28 14:17:12] 2025-05-28 12:16:59,182 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 14:17:12] 2025-05-28 12:16:59,182 | INFO     | collected zombie processes
[2025-05-28 14:17:12] 2025-05-28 12:16:59,182 | INFO     | will attempt to kill all subprocesses of pid=236146
[2025-05-28 14:17:12] 2025-05-28 12:16:59,901 | INFO     | process IDs to be killed: [236146] (in reverse order)
[2025-05-28 14:17:12] 2025-05-28 12:16:59,974 | INFO     | PID=228935 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-28 14:17:12] 2025-05-28 12:16:59,975 | INFO     | .. there are 16 such processes running
[2025-05-28 14:17:12] 2025-05-28 12:17:00,001 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 14:17:12] 2025-05-28 12:17:00,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 14:17:12] 2025-05-28 12:17:00,010 | INFO     | did not find any defunct processes belonging to 236146
[2025-05-28 14:17:12] 2025-05-28 12:17:00,019 | INFO     | did not find any defunct processes belonging to 236146
[2025-05-28 14:17:12] 2025-05-28 12:17:00,019 | INFO     | ready for new job
[2025-05-28 14:17:12] 2025-05-28 12:17:00,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 14:17:12] 2025-05-28 12:17:00,021 | INFO     | **************************************
[2025-05-28 14:17:12] 2025-05-28 12:17:00,021 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 14:17:12] 2025-05-28 12:17:00,021 | INFO     | **************************************
[2025-05-28 14:17:12] 2025-05-28 12:17:00,021 | INFO     | 
[2025-05-28 14:17:12] 2025-05-28 12:17:00,024 | INFO     | architecture information:
[2025-05-28 14:17:12] 2025-05-28 12:17:00,025 | INFO     | executing command: cat /etc/os-release
[2025-05-28 14:17:12] 2025-05-28 12:17:00,037 | INFO     | cat /etc/os-release:
[2025-05-28 14:17:12] NAME="CentOS Linux"
[2025-05-28 14:17:12] VERSION="7 (Core)"
[2025-05-28 14:17:12] ID="centos"
[2025-05-28 14:17:12] ID_LIKE="rhel fedora"
[2025-05-28 14:17:12] VERSION_ID="7"
[2025-05-28 14:17:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 14:17:12] ANSI_COLOR="0;31"
[2025-05-28 14:17:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 14:17:12] HOME_URL="https://www.centos.org/"
[2025-05-28 14:17:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 14:17:12] 
[2025-05-28 14:17:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 14:17:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 14:17:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 14:17:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 14:17:12] 
[2025-05-28 14:17:12] 2025-05-28 12:17:00,037 | INFO     | **************************************
[2025-05-28 14:17:12] 2025-05-28 12:17:00,540 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-05-28 14:17:12] 2025-05-28 12:17:00,557 | INFO     | sufficient remaining disk space (673075691520 B)
[2025-05-28 14:17:12] 2025-05-28 12:17:00,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 14:17:12] 2025-05-28 12:17:00,557 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 14:17:12] 2025-05-28 12:17:00,558 | INFO     | update_server=False
[2025-05-28 14:17:12] 2025-05-28 12:17:00,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 14:17:12] 2025-05-28 12:17:00,558 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 14:17:12] 2025-05-28 12:17:00,560 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 14:17:12] 2025-05-28 12:17:00,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 14:17:12] 2025-05-28 12:17:00,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 14:17:12] 2025-05-28 12:17:01,042 | INFO     | all job control threads have been joined
[2025-05-28 14:17:12] 2025-05-28 12:17:01,142 | INFO     | all data control threads have been joined
[2025-05-28 14:17:12] 2025-05-28 12:17:01,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:17:12] 2025-05-28 12:17:01,170 | INFO     | aborting loop
[2025-05-28 14:17:12] 2025-05-28 12:17:01,562 | INFO     | [job] retrieve thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:01,687 | INFO     | all payload control threads have been joined
[2025-05-28 14:17:12] 2025-05-28 12:17:01,753 | INFO     | [payload] failed_post thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:01,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 14:17:12] 2025-05-28 12:17:01,890 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:01,893 | INFO     | [job] validate thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,047 | INFO     | [job] control thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,147 | INFO     | [data] control thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,174 | INFO     | [job] job monitor thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 14:17:12] 2025-05-28 12:17:02,596 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,679 | INFO     | [data] copytool_in thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,692 | INFO     | [payload] control thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,713 | INFO     | [payload] validate_post thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:02,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:17:12] 2025-05-28 12:17:02,967 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:03,797 | INFO     | [data] copytool_out thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:03,887 | INFO     | [job] queue monitor thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:06,307 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 14:17:12] 2025-05-28 12:17:07,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23041622615872)>', '<ExcThread(monitor, started 23041377519360)>']
[2025-05-28 14:17:12] 2025-05-28 12:17:07,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 14:17:12] 2025-05-28 12:17:07,590 | INFO     | [monitor] control thread has ended
[2025-05-28 14:17:12] 2025-05-28 12:17:12,036 | INFO     | all workflow threads have been joined
[2025-05-28 14:17:12] 2025-05-28 12:17:12,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 14:17:12] 2025-05-28 12:17:12,037 | INFO     | traces error code: 0
[2025-05-28 14:17:12] 2025-05-28 12:17:12,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 14:17:12] 2025-05-28 12:17:12,162 [wrapper] ==== pilot stdout END ====
[2025-05-28 14:17:12] 2025-05-28 12:17:12,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 14:17:12] 2025-05-28 12:17:12,168 [wrapper] pilotpid: 228935
[2025-05-28 14:17:12] 2025-05-28 12:17:12,170 [wrapper] Pilot exit status: 0
[2025-05-28 14:17:12] 2025-05-28 12:17:12,179 [wrapper] pandaids: 6665720984
[2025-05-28 14:17:12] 2025-05-28 12:17:12,237 [wrapper] cleanup supervisor_pilot  834591 228936
[2025-05-28 14:17:12] 2025-05-28 12:17:12,239 [wrapper] Test setup, not cleaning
[2025-05-28 14:17:12] 2025-05-28 12:17:12,242 [wrapper] apfmon messages muted
[2025-05-28 14:17:12] 2025-05-28 12:17:12,244 [wrapper] ==== wrapper stdout END ====
[2025-05-28 14:17:12] 2025-05-28 12:17:12,247 [wrapper] ==== wrapper stderr END ====
[2025-05-28 14:17:12]  *** Error codes and diagnostics ***
[2025-05-28 14:17:12]     "exeErrorCode": 0,
[2025-05-28 14:17:12]     "exeErrorDiag": "",
[2025-05-28 14:17:12]     "pilotErrorCode": 0,
[2025-05-28 14:17:12]     "pilotErrorDiag": "",
[2025-05-28 14:17:12]  *** Listing of results directory ***
[2025-05-28 14:17:12] total 412680
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc    495897 May 25 09:40 pilot3.tar.gz
[2025-05-28 14:17:12] -rwx------ 1 boinc boinc     37140 May 25 09:52 runpilot2-wrapper.sh
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc      5111 May 25 09:52 queuedata.json
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc       100 May 28 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 14:17:12] -rwxr-xr-x 1 boinc boinc      7986 May 28 10:14 run_atlas
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc       105 May 28 10:14 job.xml
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc      6636 May 28 10:14 init_data.xml
[2025-05-28 14:17:12] -rw-r--r-- 2 boinc boinc 223300900 May 28 10:14 EVNT.44871834._001252.pool.root.1
[2025-05-28 14:17:12] -rw-r--r-- 2 boinc boinc     15093 May 28 10:14 start_atlas.sh
[2025-05-28 14:17:12] drwxrwx--x 2 boinc boinc      4096 May 28 10:14 shared
[2025-05-28 14:17:12] -rw-r--r-- 2 boinc boinc    508878 May 28 10:14 input.tar.gz
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc         0 May 28 10:14 boinc_lockfile
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc      2559 May 28 10:14 pandaJob.out
[2025-05-28 14:17:12] -rw------- 1 boinc boinc    991169 May 28 10:14 agis_schedconf.cvmfs.json
[2025-05-28 14:17:12] drwx------ 4 boinc boinc      4096 May 28 10:14 pilot3
[2025-05-28 14:17:12] -rw------- 1 boinc boinc 192119590 May 28 14:16 HITS.44871837._031404.pool.root.1
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc       531 May 28 14:16 boinc_task_state.xml
[2025-05-28 14:17:12] -rw------- 1 boinc boinc      1031 May 28 14:16 memory_monitor_summary.json
[2025-05-28 14:17:12] -rw------- 1 boinc boinc   1603667 May 28 14:16 agis_ddmendpoints.agis.ALL.json
[2025-05-28 14:17:12] -rw------- 1 boinc boinc    332818 May 28 14:16 log.44871837._031404.job.log.tgz.1
[2025-05-28 14:17:12] -rw------- 1 boinc boinc      7738 May 28 14:16 heartbeat.json
[2025-05-28 14:17:12] -rw------- 1 boinc boinc        95 May 28 14:17 pilot_heartbeat.json
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc      8192 May 28 14:17 boinc_mmap_file
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc        28 May 28 14:17 wrapper_checkpoint.txt
[2025-05-28 14:17:12] -rw------- 1 boinc boinc      4486 May 28 14:17 pilotlog.txt
[2025-05-28 14:17:12] -rw------- 1 boinc boinc   1330350 May 28 14:17 log.44871837._031404.job.log.1
[2025-05-28 14:17:12] -rw------- 1 boinc boinc       357 May 28 14:17 output.list
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc       620 May 28 14:17 runtime_log
[2025-05-28 14:17:12] -rw------- 1 boinc boinc   1679360 May 28 14:17 result.tar.gz
[2025-05-28 14:17:12] -rw------- 1 boinc boinc       666 May 28 14:17 ukmMDmeKLd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQ8NKDm2L1WNn.diag
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc      9026 May 28 14:17 runtime_log.err
[2025-05-28 14:17:12] -rw-r--r-- 1 boinc boinc     21053 May 28 14:17 stderr.txt
[2025-05-28 14:17:12] HITS file was successfully produced:
[2025-05-28 14:17:12] -rw------- 1 boinc boinc 192119590 May 28 14:16 shared/HITS.pool.root.1
[2025-05-28 14:17:12]  *** Contents of shared directory: ***
[2025-05-28 14:17:12] total 407852
[2025-05-28 14:17:12] -rw-r--r-- 2 boinc boinc 223300900 May 28 10:14 ATLAS.root_0
[2025-05-28 14:17:12] -rw-r--r-- 2 boinc boinc     15093 May 28 10:14 start_atlas.sh
[2025-05-28 14:17:12] -rw-r--r-- 2 boinc boinc    508878 May 28 10:14 input.tar.gz
[2025-05-28 14:17:12] -rw------- 1 boinc boinc 192119590 May 28 14:16 HITS.pool.root.1
[2025-05-28 14:17:12] -rw------- 1 boinc boinc   1679360 May 28 14:17 result.tar.gz
14:17:13 (225242): run_atlas exited; CPU time 56068.444971
14:17:13 (225242): called boinc_finish(0)

</stderr_txt>
]]>

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